RNA–Protein interactions for RNA: ENST00000594668.5

ZNF548-203, Transcript of zinc finger protein 548, humanhuman

TSL 5

Gene ZNF548, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-203ENST00000594668 CASTP20810 708 aaKnown RBP10.92□□□□□ -0.66
ZNF548-203ENST00000594668 RPS6KB1P23443 525 aa10.92□□□□□ -0.66
ZNF548-203ENST00000594668 PSMA5P28066 241 aa10.92□□□□□ -0.66
ZNF548-203ENST00000594668 GTF2A2P52657 109 aa10.92□□□□□ -0.66
ZNF548-203ENST00000594668 SNAPC2Q13487 334 aa10.92□□□□□ -0.66
ZNF548-203ENST00000594668 SH3D19Q5HYK7 790 aa10.92□□□□□ -0.66
ZNF548-203ENST00000594668 BLOC1S2Q6QNY1 142 aa10.92□□□□□ -0.66
ZNF548-203ENST00000594668 USP17L2Q6R6M4 530 aa10.92□□□□□ -0.66
ZNF548-203ENST00000594668 RUFY3Q7L099 469 aa10.92□□□□□ -0.66
ZNF548-203ENST00000594668 DGKHQ86XP1 1220 aa10.92□□□□□ -0.66
ZNF548-203ENST00000594668 BRI3BPQ8WY22 251 aa10.92□□□□□ -0.66
ZNF548-203ENST00000594668 CHMP4CQ96CF2 233 aa10.92□□□□□ -0.66
ZNF548-203ENST00000594668 FEZ1Q99689 392 aa10.92□□□□□ -0.66
ZNF548-203ENST00000594668 UBAC1Q9BSL1 405 aa10.92□□□□□ -0.66
ZNF548-203ENST00000594668 TM6SF1Q9BZW5 370 aa10.92□□□□□ -0.66
ZNF548-203ENST00000594668 KIAA1683Q9H0B3 1180 aa10.92□□□□□ -0.66
ZNF548-203ENST00000594668 SMCHD1A6NHR9 2005 aa10.92□□□□□ -0.66
ZNF548-203ENST00000594668 CCL15-CCL14A0A0B4J2E2 113 aa10.91□□□□□ -0.66
ZNF548-203ENST00000594668 MANSC4A6NHS7 340 aaPredicted RBP10.91□□□□□ -0.66
ZNF548-203ENST00000594668 F5H6K3 240 aa10.91□□□□□ -0.66
ZNF548-203ENST00000594668 TOP1P11387 765 aaKnown RBP10.91□□□□□ -0.66
ZNF548-203ENST00000594668 CETPP11597 493 aa10.91□□□□□ -0.66
ZNF548-203ENST00000594668 TM4SF4P48230 202 aa10.91□□□□□ -0.66
ZNF548-203ENST00000594668 KLRC3Q07444 240 aa10.91□□□□□ -0.66
ZNF548-203ENST00000594668 NOGQ13253 232 aa10.91□□□□□ -0.66
ZNF548-203ENST00000594668 CCL15Q16663 113 aa10.91□□□□□ -0.66
ZNF548-203ENST00000594668 CCDC178Q5BJE1 867 aa10.91□□□□□ -0.66
ZNF548-203ENST00000594668 TMEM67Q5HYA8 995 aa10.91□□□□□ -0.66
ZNF548-203ENST00000594668 TREML2Q5T2D2 321 aa10.91□□□□□ -0.66
ZNF548-203ENST00000594668 GPAT2Q6NUI2 795 aa10.91□□□□□ -0.66
ZNF548-203ENST00000594668 GADL1Q6ZQY3 521 aa10.91□□□□□ -0.66
ZNF548-203ENST00000594668 RASGRP2Q7LDG7 609 aa10.91□□□□□ -0.66
ZNF548-203ENST00000594668 SPICE1Q8N0Z3 855 aa10.91□□□□□ -0.66
ZNF548-203ENST00000594668 TBC1D32Q96NH3 1257 aa10.91□□□□□ -0.66
ZNF548-203ENST00000594668 UPF3BQ9BZI7 483 aaKnown RBP10.91□□□□□ -0.66
ZNF548-203ENST00000594668 VCPKMTQ9H867 229 aa10.91□□□□□ -0.66
ZNF548-203ENST00000594668 UPF2Q9HAU5 1272 aaKnown RBP10.91□□□□□ -0.66
ZNF548-203ENST00000594668 LY9Q9HBG7 655 aa10.91□□□□□ -0.66
ZNF548-203ENST00000594668 WDR19Q8NEZ3 1342 aa10.9□□□□□ -0.66
ZNF548-203ENST00000594668 BTBD19C9JJ37 291 aa10.9□□□□□ -0.66
ZNF548-203ENST00000594668 SH2B2O14492 632 aaPredicted RBP10.9□□□□□ -0.66
ZNF548-203ENST00000594668 RAD21O60216 631 aa10.9□□□□□ -0.66
ZNF548-203ENST00000594668 NDUFB10O96000 172 aa10.9□□□□□ -0.66
ZNF548-203ENST00000594668 MAP2K2P36507 400 aa10.9□□□□□ -0.66
ZNF548-203ENST00000594668 USP14P54578 494 aa10.9□□□□□ -0.66
ZNF548-203ENST00000594668 WTAPQ15007 396 aa10.9□□□□□ -0.66
ZNF548-203ENST00000594668 PPP4R3BQ5MIZ7 849 aa10.9□□□□□ -0.66
ZNF548-203ENST00000594668 IFIT1BQ5T764 474 aaKnown RBP10.9□□□□□ -0.66
ZNF548-203ENST00000594668 SLFN13Q68D06 897 aa10.9□□□□□ -0.66
ZNF548-203ENST00000594668 Q6ZUG5 572 aa10.9□□□□□ -0.66
ZNF548-203ENST00000594668 FASTKD5Q7L8L6 764 aaKnown RBP10.9□□□□□ -0.66
ZNF548-203ENST00000594668 PROCA1Q8NCQ7 364 aaPredicted RBP10.9□□□□□ -0.66
ZNF548-203ENST00000594668 GMCL1P1Q8NEA9 526 aa10.9□□□□□ -0.66
ZNF548-203ENST00000594668 TMEM87BQ96K49 555 aa10.9□□□□□ -0.66
ZNF548-203ENST00000594668 C12orf42Q96LP6 360 aa10.9□□□□□ -0.66
ZNF548-203ENST00000594668 MTA3Q9BTC8 594 aa10.9□□□□□ -0.66
ZNF548-203ENST00000594668 SH2D4AQ9H788 454 aa10.9□□□□□ -0.66
ZNF548-203ENST00000594668 TMOD4Q9NZQ9 345 aa10.9□□□□□ -0.66
ZNF548-203ENST00000594668 MTMR7Q9Y216 660 aa10.9□□□□□ -0.66
ZNF548-203ENST00000594668 CYP46A1Q9Y6A2 500 aa10.9□□□□□ -0.66
ZNF548-203ENST00000594668 PCNTO95613 3336 aa10.9□□□□□ -0.66
ZNF548-203ENST00000594668 ERICH2A1L162 156 aa10.89□□□□□ -0.67
ZNF548-203ENST00000594668 IGF2BP3O00425 579 aaKnown RBP eCLIP10.89□□□□□ -0.67
ZNF548-203ENST00000594668 VCAM1P19320 739 aa10.89□□□□□ -0.67
ZNF548-203ENST00000594668 INHBEP58166 350 aa10.89□□□□□ -0.67
ZNF548-203ENST00000594668 SART3Q15020 963 aaKnown RBP10.89□□□□□ -0.67
ZNF548-203ENST00000594668 IFNL1Q8IU54 200 aa10.89□□□□□ -0.67
ZNF548-203ENST00000594668 FAM43AQ8N2R8 423 aa10.89□□□□□ -0.67
ZNF548-203ENST00000594668 PNMA1Q8ND90 353 aa10.89□□□□□ -0.67
ZNF548-203ENST00000594668 NUP88Q99567 741 aaPredicted RBP10.89□□□□□ -0.67
ZNF548-203ENST00000594668 LARP6Q9BRS8 491 aaKnown RBP10.89□□□□□ -0.67
ZNF548-203ENST00000594668 KAT14Q9H8E8 782 aa10.89□□□□□ -0.67
ZNF548-203ENST00000594668 GOPCQ9HD26 462 aa10.89□□□□□ -0.67
ZNF548-203ENST00000594668 PDRG1Q9NUG6 133 aa10.89□□□□□ -0.67
ZNF548-203ENST00000594668 SYNPO2Q9UMS6 1093 aa10.89□□□□□ -0.67
ZNF548-203ENST00000594668 PDHBP11177 359 aa10.88□□□□□ -0.67
ZNF548-203ENST00000594668 LIFRP42702 1097 aa10.88□□□□□ -0.67
ZNF548-203ENST00000594668 NEK4P51957 841 aa10.88□□□□□ -0.67
ZNF548-203ENST00000594668 SREBF2Q12772 1141 aa10.88□□□□□ -0.67
ZNF548-203ENST00000594668 TOB2Q14106 344 aaPredicted RBP10.88□□□□□ -0.67
ZNF548-203ENST00000594668 FAM83BQ5T0W9 1011 aa10.88□□□□□ -0.67
ZNF548-203ENST00000594668 CATSPERGQ6ZRH7 1159 aa10.88□□□□□ -0.67
ZNF548-203ENST00000594668 ANKRD23Q86SG2 305 aa10.88□□□□□ -0.67
ZNF548-203ENST00000594668 SGMS1Q86VZ5 419 aa10.88□□□□□ -0.67
ZNF548-203ENST00000594668 TMTC2Q8N394 836 aa10.88□□□□□ -0.67
ZNF548-203ENST00000594668 FBXL16Q8N461 479 aa10.88□□□□□ -0.67
ZNF548-203ENST00000594668 LPAR1Q92633 364 aa10.88□□□□□ -0.67
ZNF548-203ENST00000594668 MYL10Q9BUA6 226 aa10.88□□□□□ -0.67
ZNF548-203ENST00000594668 AGXT2Q9BYV1 514 aa10.88□□□□□ -0.67
ZNF548-203ENST00000594668 RPAP3Q9H6T3 665 aaPredicted RBP10.88□□□□□ -0.67
ZNF548-203ENST00000594668 BRPF3Q9ULD4 1205 aa10.88□□□□□ -0.67
ZNF548-203ENST00000594668 AGTPBP1Q9UPW5 1226 aa10.88□□□□□ -0.67
ZNF548-203ENST00000594668 ZNFX1Q9P2E3 1918 aaKnown RBP10.88□□□□□ -0.67
ZNF548-203ENST00000594668 DOCK3Q8IZD9 2030 aa10.87□□□□□ -0.67
ZNF548-203ENST00000594668 MGAMO43451 1857 aa10.87□□□□□ -0.67
ZNF548-203ENST00000594668 PDHXO00330 501 aa10.87□□□□□ -0.67
ZNF548-203ENST00000594668 WDR46O15213 610 aaKnown RBP10.87□□□□□ -0.67
ZNF548-203ENST00000594668 SNHG28P0DPA3 235 aa10.87□□□□□ -0.67
ZNF548-203ENST00000594668 BMP3P12645 472 aa10.87□□□□□ -0.67
ZNF548-203ENST00000594668 HOXA7P31268 230 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms