RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 CLIP2Q9UDT6 1046 aa17.57■□□□□ 0.4
PNKP-204ENST00000594661 DLEC1Q9Y238 1755 aa17.56■□□□□ 0.4
PNKP-204ENST00000594661 POLR3GO15318 223 aaPredicted RBP17.56■□□□□ 0.4
PNKP-204ENST00000594661 RTN1Q16799 776 aa17.56■□□□□ 0.4
PNKP-204ENST00000594661 DOK7Q18PE1 504 aa17.56■□□□□ 0.4
PNKP-204ENST00000594661 FILIP1Q7Z7B0 1213 aa17.56■□□□□ 0.4
PNKP-204ENST00000594661 ALG1Q9BT22 464 aa17.56■□□□□ 0.4
PNKP-204ENST00000594661 ARGLU1Q9NWB6 273 aaPredicted RBP17.56■□□□□ 0.4
PNKP-204ENST00000594661 GPR75-ASB3A0A0A6YYF3 556 aa17.56■□□□□ 0.4
PNKP-204ENST00000594661 H0YIN7 160 aa17.56■□□□□ 0.4
PNKP-204ENST00000594661 CHRNA5P30532 468 aa17.56■□□□□ 0.4
PNKP-204ENST00000594661 IARSP41252 1262 aaKnown RBP17.56■□□□□ 0.4
PNKP-204ENST00000594661 FAM47AQ5JRC9 791 aa17.56■□□□□ 0.4
PNKP-204ENST00000594661 C12orf60Q5U649 245 aa17.56■□□□□ 0.4
PNKP-204ENST00000594661 TMCO3Q6UWJ1 677 aa17.56■□□□□ 0.4
PNKP-204ENST00000594661 NUP133Q8WUM0 1156 aa17.56■□□□□ 0.4
PNKP-204ENST00000594661 FBXW7Q969H0 707 aa17.56■□□□□ 0.4
PNKP-204ENST00000594661 GOLGB1Q14789 3259 aaKnown RBP17.55■□□□□ 0.4
PNKP-204ENST00000594661 SLX4Q8IY92 1834 aa17.55■□□□□ 0.4
PNKP-204ENST00000594661 SLC3A2P08195 630 aaKnown RBP17.55■□□□□ 0.4
PNKP-204ENST00000594661 DEFB132Q7Z7B7 95 aa17.55■□□□□ 0.4
PNKP-204ENST00000594661 PACS2Q86VP3 889 aa17.55■□□□□ 0.4
PNKP-204ENST00000594661 IQCA1Q86XH1 822 aa17.55■□□□□ 0.4
PNKP-204ENST00000594661 MAPKAPK5Q8IW41 473 aa17.55■□□□□ 0.4
PNKP-204ENST00000594661 CCAR2Q8N163 923 aaKnown RBP17.55■□□□□ 0.4
PNKP-204ENST00000594661 EXOC4Q96A65 974 aa17.55■□□□□ 0.4
PNKP-204ENST00000594661 SLC26A6Q9BXS9 759 aa17.55■□□□□ 0.4
PNKP-204ENST00000594661 GAKO14976 1311 aa17.55■□□□□ 0.4
PNKP-204ENST00000594661 KIF28PB7ZC32 967 aa17.54■□□□□ 0.4
PNKP-204ENST00000594661 NMT2O60551 498 aa17.54■□□□□ 0.4
PNKP-204ENST00000594661 IFNAR1P17181 557 aa17.54■□□□□ 0.4
PNKP-204ENST00000594661 RCAN1P53805 252 aa17.54■□□□□ 0.4
PNKP-204ENST00000594661 GSCP56915 257 aaPredicted RBP17.54■□□□□ 0.4
PNKP-204ENST00000594661 SWT1Q5T5J6 900 aaKnown RBP17.54■□□□□ 0.4
PNKP-204ENST00000594661 IFIT1BQ5T764 474 aaKnown RBP17.54■□□□□ 0.4
PNKP-204ENST00000594661 STYK1Q6J9G0 422 aa17.54■□□□□ 0.4
PNKP-204ENST00000594661 SUGP1Q8IWZ8 645 aaKnown RBP17.54■□□□□ 0.4
PNKP-204ENST00000594661 REXO1L1PQ8IX06 675 aa17.54■□□□□ 0.4
PNKP-204ENST00000594661 CCAR1Q8IX12 1150 aaKnown RBP17.54■□□□□ 0.4
PNKP-204ENST00000594661 CMTR1Q8N1G2 835 aaKnown RBP17.54■□□□□ 0.4
PNKP-204ENST00000594661 CERS5Q8N5B7 392 aa17.54■□□□□ 0.4
PNKP-204ENST00000594661 DYNLL2Q96FJ2 89 aa17.54■□□□□ 0.4
PNKP-204ENST00000594661 DONSONQ9NYP3 566 aa17.54■□□□□ 0.4
PNKP-204ENST00000594661 TAOK2Q9UL54 1235 aa17.54■□□□□ 0.4
PNKP-204ENST00000594661 STK36Q9NRP7 1315 aa17.54■□□□□ 0.4
PNKP-204ENST00000594661 FMNL1O95466 1100 aaPredicted RBP17.54■□□□□ 0.4
PNKP-204ENST00000594661 POLR3DP05423 398 aaPredicted RBP17.54■□□□□ 0.4
PNKP-204ENST00000594661 ME1P48163 572 aa17.54■□□□□ 0.4
PNKP-204ENST00000594661 PDE4BQ07343 736 aa17.54■□□□□ 0.4
PNKP-204ENST00000594661 RBM43Q6ZSC3 357 aaKnown RBP17.54■□□□□ 0.4
PNKP-204ENST00000594661 FANCBQ8NB91 859 aa17.54■□□□□ 0.4
PNKP-204ENST00000594661 FAM163AQ96GL9 167 aaPredicted RBP17.54■□□□□ 0.4
PNKP-204ENST00000594661 MXD3Q9BW11 206 aa17.54■□□□□ 0.4
PNKP-204ENST00000594661 TMX4Q9H1E5 349 aaPredicted RBP17.54■□□□□ 0.4
PNKP-204ENST00000594661 DDX60LQ5H9U9 1706 aaKnown RBP17.54■□□□□ 0.4
PNKP-204ENST00000594661 RHBDL3P58872 404 aa17.53■□□□□ 0.4
PNKP-204ENST00000594661 KIF23Q02241 960 aaPredicted RBP17.53■□□□□ 0.4
PNKP-204ENST00000594661 SSRP1Q08945 709 aaKnown RBP17.53■□□□□ 0.4
PNKP-204ENST00000594661 ZNF219Q9P2Y4 722 aaPredicted RBP17.53■□□□□ 0.4
PNKP-204ENST00000594661 SAP30BPQ9UHR5 308 aaKnown RBP17.53■□□□□ 0.4
PNKP-204ENST00000594661 ROBO3Q96MS0 1386 aa17.53■□□□□ 0.4
PNKP-204ENST00000594661 OAS2P29728 719 aaKnown RBP17.53■□□□□ 0.4
PNKP-204ENST00000594661 GUCY1A2P33402 732 aa17.53■□□□□ 0.4
PNKP-204ENST00000594661 ARHGAP29Q52LW3 1261 aa17.53■□□□□ 0.4
PNKP-204ENST00000594661 KRT40Q6A162 431 aa17.53■□□□□ 0.4
PNKP-204ENST00000594661 BRAPQ7Z569 592 aa17.53■□□□□ 0.4
PNKP-204ENST00000594661 NBPF11Q86T75 865 aa17.53■□□□□ 0.4
PNKP-204ENST00000594661 TEX11Q8IYF3 940 aa17.53■□□□□ 0.4
PNKP-204ENST00000594661 CNPY4Q8N129 248 aa17.53■□□□□ 0.4
PNKP-204ENST00000594661 CCDC82Q8N4S0 544 aa17.53■□□□□ 0.4
PNKP-204ENST00000594661 DRC1Q96MC2 740 aa17.53■□□□□ 0.4
PNKP-204ENST00000594661 RTEL1Q9NZ71 1219 aa17.53■□□□□ 0.4
PNKP-204ENST00000594661 DAGLAQ9Y4D2 1042 aa17.53■□□□□ 0.4
PNKP-204ENST00000594661 F8W031 263 aaPredicted RBP17.52■□□□□ 0.4
PNKP-204ENST00000594661 PLCD1P51178 756 aa17.52■□□□□ 0.4
PNKP-204ENST00000594661 ANO6Q4KMQ2 910 aa17.52■□□□□ 0.4
PNKP-204ENST00000594661 SARM1Q6SZW1 724 aa17.52■□□□□ 0.4
PNKP-204ENST00000594661 CCDC73Q6ZRK6 1079 aa17.52■□□□□ 0.4
PNKP-204ENST00000594661 SLF2Q8IX21 1173 aa17.52■□□□□ 0.4
PNKP-204ENST00000594661 CEP120Q8N960 986 aa17.52■□□□□ 0.4
PNKP-204ENST00000594661 GOLPH3LQ9H4A5 285 aa17.52■□□□□ 0.4
PNKP-204ENST00000594661 DEF6Q9H4E7 631 aa17.52■□□□□ 0.4
PNKP-204ENST00000594661 TSPY2A6NKD2 308 aa17.51■□□□□ 0.39
PNKP-204ENST00000594661 KIF1CO43896 1103 aaKnown RBP17.51■□□□□ 0.39
PNKP-204ENST00000594661 SKILP12757 684 aa17.51■□□□□ 0.39
PNKP-204ENST00000594661 ACTN2P35609 894 aa17.51■□□□□ 0.39
PNKP-204ENST00000594661 CCZ1BP86790 482 aa17.51■□□□□ 0.39
PNKP-204ENST00000594661 CCZ1P86791 482 aaPredicted RBP17.51■□□□□ 0.39
PNKP-204ENST00000594661 CCDC91Q7Z6B0 441 aa17.51■□□□□ 0.39
PNKP-204ENST00000594661 EYA3Q99504 573 aa17.51■□□□□ 0.39
PNKP-204ENST00000594661 FLT1P17948 1338 aa17.51■□□□□ 0.39
PNKP-204ENST00000594661 CCDC196A0A1B0GTZ2 297 aa17.51■□□□□ 0.39
PNKP-204ENST00000594661 IVLP07476 585 aa17.51■□□□□ 0.39
PNKP-204ENST00000594661 BAG6P46379 1132 aa17.51■□□□□ 0.39
PNKP-204ENST00000594661 STK38Q15208 465 aa17.51■□□□□ 0.39
PNKP-204ENST00000594661 MYSM1Q5VVJ2 828 aa17.51■□□□□ 0.39
PNKP-204ENST00000594661 CATIPQ7Z7H3 387 aa17.51■□□□□ 0.39
PNKP-204ENST00000594661 CRACR2BQ8N4Y2 399 aaPredicted RBP17.51■□□□□ 0.39
PNKP-204ENST00000594661 SLC44A5Q8NCS7 719 aa17.51■□□□□ 0.39
PNKP-204ENST00000594661 MRFAP1L1Q96HT8 127 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms