RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 NKX2-3Q8TAU0 364 aa17.61■□□□□ 0.41
DDX39A-221ENST00000593026 LPAR1Q92633 364 aa17.61■□□□□ 0.41
DDX39A-221ENST00000593026 PARK7Q99497 189 aaKnown RBP17.61■□□□□ 0.41
DDX39A-221ENST00000593026 CFHR5Q9BXR6 569 aa17.61■□□□□ 0.41
DDX39A-221ENST00000593026 VCPKMTQ9H867 229 aa17.61■□□□□ 0.41
DDX39A-221ENST00000593026 ZFYVE28Q9HCC9 887 aa17.61■□□□□ 0.41
DDX39A-221ENST00000593026 GOPCQ9HD26 462 aa17.61■□□□□ 0.41
DDX39A-221ENST00000593026 TCP11L1Q9NUJ3 509 aa17.61■□□□□ 0.41
DDX39A-221ENST00000593026 PNMA3Q9UL41 463 aa17.61■□□□□ 0.41
DDX39A-221ENST00000593026 SYNPO2Q9UMS6 1093 aa17.61■□□□□ 0.41
DDX39A-221ENST00000593026 RAD21O60216 631 aa17.6■□□□□ 0.41
DDX39A-221ENST00000593026 ZKSCAN1P17029 563 aaPredicted RBP17.6■□□□□ 0.41
DDX39A-221ENST00000593026 LRRC47Q8N1G4 583 aaKnown RBP17.6■□□□□ 0.41
DDX39A-221ENST00000593026 MKL1Q969V6 931 aa17.6■□□□□ 0.41
DDX39A-221ENST00000593026 ZSWIM5Q9P217 1185 aa17.6■□□□□ 0.41
DDX39A-221ENST00000593026 EPB41L2O43491 1005 aaKnown RBP17.59■□□□□ 0.41
DDX39A-221ENST00000593026 OSBPP22059 807 aa17.59■□□□□ 0.41
DDX39A-221ENST00000593026 IRX3P78415 501 aaPredicted RBP17.59■□□□□ 0.41
DDX39A-221ENST00000593026 CCDC178Q5BJE1 867 aa17.59■□□□□ 0.41
DDX39A-221ENST00000593026 TNS4Q8IZW8 715 aa17.59■□□□□ 0.41
DDX39A-221ENST00000593026 SPICE1Q8N0Z3 855 aa17.59■□□□□ 0.41
DDX39A-221ENST00000593026 ZKSCAN3Q9BRR0 538 aa17.59■□□□□ 0.41
DDX39A-221ENST00000593026 UBAC1Q9BSL1 405 aa17.59■□□□□ 0.41
DDX39A-221ENST00000593026 USP17L15C9J2P7 530 aa17.58■□□□□ 0.4
DDX39A-221ENST00000593026 USP17L13C9JLJ4 530 aa17.58■□□□□ 0.4
DDX39A-221ENST00000593026 USP17L11C9JVI0 530 aa17.58■□□□□ 0.4
DDX39A-221ENST00000593026 USP17L18D6R9N7 530 aa17.58■□□□□ 0.4
DDX39A-221ENST00000593026 USP17L22D6RA61 530 aa17.58■□□□□ 0.4
DDX39A-221ENST00000593026 USP17L17D6RBQ6 530 aa17.58■□□□□ 0.4
DDX39A-221ENST00000593026 USP17L19D6RCP7 530 aa17.58■□□□□ 0.4
DDX39A-221ENST00000593026 USP17L20D6RJB6 530 aa17.58■□□□□ 0.4
DDX39A-221ENST00000593026 EIF5BO60841 1220 aaKnown RBP17.58■□□□□ 0.4
DDX39A-221ENST00000593026 CYP2C8P10632 490 aa17.58■□□□□ 0.4
DDX39A-221ENST00000593026 HSPA8P11142 646 aaKnown RBP17.58■□□□□ 0.4
DDX39A-221ENST00000593026 HOXA7P31268 230 aaPredicted RBP17.58■□□□□ 0.4
DDX39A-221ENST00000593026 HSPA4P34932 840 aa17.58■□□□□ 0.4
DDX39A-221ENST00000593026 NOVP48745 357 aa17.58■□□□□ 0.4
DDX39A-221ENST00000593026 LBX1P52954 281 aa17.58■□□□□ 0.4
DDX39A-221ENST00000593026 USP17L24Q0WX57 530 aa17.58■□□□□ 0.4
DDX39A-221ENST00000593026 KIAA1755Q5JYT7 1200 aa17.58■□□□□ 0.4
DDX39A-221ENST00000593026 SMCR8Q8TEV9 937 aaPredicted RBP17.58■□□□□ 0.4
DDX39A-221ENST00000593026 ZSCAN10Q96SZ4 725 aaPredicted RBP17.58■□□□□ 0.4
DDX39A-221ENST00000593026 ASCC2Q9H1I8 757 aaPredicted RBP17.58■□□□□ 0.4
DDX39A-221ENST00000593026 R3HDMLQ9H3Y0 253 aa17.58■□□□□ 0.4
DDX39A-221ENST00000593026 RPAP3Q9H6T3 665 aaPredicted RBP17.58■□□□□ 0.4
DDX39A-221ENST00000593026 TNKSO95271 1327 aa17.57■□□□□ 0.4
DDX39A-221ENST00000593026 F5H6K3 240 aa17.57■□□□□ 0.4
DDX39A-221ENST00000593026 WDR46O15213 610 aaKnown RBP17.57■□□□□ 0.4
DDX39A-221ENST00000593026 TLR2O60603 784 aa17.57■□□□□ 0.4
DDX39A-221ENST00000593026 NDUFB10O96000 172 aa17.57■□□□□ 0.4
DDX39A-221ENST00000593026 TOP1P11387 765 aaKnown RBP17.57■□□□□ 0.4
DDX39A-221ENST00000593026 KLRC3Q07444 240 aa17.57■□□□□ 0.4
DDX39A-221ENST00000593026 CYB5R4Q7L1T6 521 aa17.57■□□□□ 0.4
DDX39A-221ENST00000593026 GMCL1P1Q8NEA9 526 aa17.57■□□□□ 0.4
DDX39A-221ENST00000593026 TTC14Q96N46 770 aa17.57■□□□□ 0.4
DDX39A-221ENST00000593026 TANGO6Q9C0B7 1094 aa17.57■□□□□ 0.4
DDX39A-221ENST00000593026 KRT32Q14532 448 aa17.56■□□□□ 0.4
DDX39A-221ENST00000593026 TSGA10IPQ3SY00 556 aa17.56■□□□□ 0.4
DDX39A-221ENST00000593026 RCSD1Q6JBY9 416 aa17.56■□□□□ 0.4
DDX39A-221ENST00000593026 CATSPERGQ6ZRH7 1159 aa17.56■□□□□ 0.4
DDX39A-221ENST00000593026 DGKHQ86XP1 1220 aa17.56■□□□□ 0.4
DDX39A-221ENST00000593026 MB21D2Q8IYB1 491 aaPredicted RBP17.56■□□□□ 0.4
DDX39A-221ENST00000593026 RASEFQ8IZ41 740 aa17.56■□□□□ 0.4
DDX39A-221ENST00000593026 TMEM47Q9BQJ4 181 aa17.56■□□□□ 0.4
DDX39A-221ENST00000593026 USP26Q9BXU7 913 aa17.56■□□□□ 0.4
DDX39A-221ENST00000593026 ADGRA2Q96PE1 1338 aa17.55■□□□□ 0.4
DDX39A-221ENST00000593026 GPR25O00155 361 aa17.55■□□□□ 0.4
DDX39A-221ENST00000593026 MCCP23508 829 aa17.55■□□□□ 0.4
DDX39A-221ENST00000593026 SART3Q15020 963 aaKnown RBP17.55■□□□□ 0.4
DDX39A-221ENST00000593026 NOM1Q5C9Z4 860 aaKnown RBP17.55■□□□□ 0.4
DDX39A-221ENST00000593026 FAM83BQ5T0W9 1011 aa17.55■□□□□ 0.4
DDX39A-221ENST00000593026 SLFN13Q68D06 897 aa17.55■□□□□ 0.4
DDX39A-221ENST00000593026 ENAHQ8N8S7 591 aaPredicted RBP17.55■□□□□ 0.4
DDX39A-221ENST00000593026 KCNB2Q92953 911 aa17.55■□□□□ 0.4
DDX39A-221ENST00000593026 ERICH2A1L162 156 aa17.54■□□□□ 0.4
DDX39A-221ENST00000593026 IFIT3O14879 490 aaKnown RBP17.54■□□□□ 0.4
DDX39A-221ENST00000593026 MCM5P33992 734 aa17.54■□□□□ 0.4
DDX39A-221ENST00000593026 HERVK_113P62684 666 aa17.54■□□□□ 0.4
DDX39A-221ENST00000593026 C8orf34Q49A92 452 aa17.54■□□□□ 0.4
DDX39A-221ENST00000593026 CHST3Q7LGC8 479 aa17.54■□□□□ 0.4
DDX39A-221ENST00000593026 NUP88Q99567 741 aaPredicted RBP17.54■□□□□ 0.4
DDX39A-221ENST00000593026 KAT14Q9H8E8 782 aa17.54■□□□□ 0.4
DDX39A-221ENST00000593026 CPA4Q9UI42 421 aa17.54■□□□□ 0.4
DDX39A-221ENST00000593026 ISY1Q9ULR0 285 aaKnown RBP17.54■□□□□ 0.4
DDX39A-221ENST00000593026 MTMR7Q9Y216 660 aa17.54■□□□□ 0.4
DDX39A-221ENST00000593026 SNX14Q9Y5W7 946 aa17.54■□□□□ 0.4
DDX39A-221ENST00000593026 PRC1O43663 620 aa17.53■□□□□ 0.4
DDX39A-221ENST00000593026 FLOT1O75955 427 aa17.53■□□□□ 0.4
DDX39A-221ENST00000593026 SLC1A4P43007 532 aa17.53■□□□□ 0.4
DDX39A-221ENST00000593026 GCLCP48506 637 aaPredicted RBP17.53■□□□□ 0.4
DDX39A-221ENST00000593026 ANTXR2P58335 489 aa17.53■□□□□ 0.4
DDX39A-221ENST00000593026 ADCK5Q3MIX3 580 aa17.53■□□□□ 0.4
DDX39A-221ENST00000593026 IFIT1BQ5T764 474 aaKnown RBP17.53■□□□□ 0.4
DDX39A-221ENST00000593026 C17orf99Q6UX52 265 aa17.53■□□□□ 0.4
DDX39A-221ENST00000593026 GTF3C2Q8WUA4 911 aaPredicted RBP17.53■□□□□ 0.4
DDX39A-221ENST00000593026 ANKS1AQ92625 1134 aa17.53■□□□□ 0.4
DDX39A-221ENST00000593026 GMCL1Q96IK5 515 aa17.53■□□□□ 0.4
DDX39A-221ENST00000593026 NEK1Q96PY6 1258 aa17.53■□□□□ 0.4
DDX39A-221ENST00000593026 P2RX7Q99572 595 aaKnown RBP17.53■□□□□ 0.4
DDX39A-221ENST00000593026 FKTNO75072 461 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms