RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 PUF60Q9UHX1 559 aaKnown RBP16.84■□□□□ 0.29
SMARCA4-219ENST00000592604 FAM205CA6NFA0 338 aa16.84■□□□□ 0.29
SMARCA4-219ENST00000592604 FXR1P51114 621 aaKnown RBP eCLIP16.84■□□□□ 0.293e-6■■■□□ 17.4
SMARCA4-219ENST00000592604 PIGBQ92521 554 aa16.84■□□□□ 0.29
SMARCA4-219ENST00000592604 TSPYL1Q9H0U9 437 aa16.84■□□□□ 0.29
SMARCA4-219ENST00000592604 MYO1AQ9UBC5 1043 aa16.84■□□□□ 0.29
SMARCA4-219ENST00000592604 L1RE1Q9UN81 338 aa16.84■□□□□ 0.29
SMARCA4-219ENST00000592604 KRT2P35908 639 aa16.83■□□□□ 0.29
SMARCA4-219ENST00000592604 KIF4BQ2VIQ3 1234 aa16.83■□□□□ 0.29
SMARCA4-219ENST00000592604 TMED8Q6PL24 325 aaPredicted RBP16.83■□□□□ 0.29
SMARCA4-219ENST00000592604 PNKPQ96T60 521 aa16.83■□□□□ 0.29
SMARCA4-219ENST00000592604 LIMA1Q9UHB6 759 aaKnown RBP16.83■□□□□ 0.29
SMARCA4-219ENST00000592604 RTL9Q8NET4 1388 aa16.83■□□□□ 0.28
SMARCA4-219ENST00000592604 ERLIN1O75477 346 aa16.83■□□□□ 0.28
SMARCA4-219ENST00000592604 RAD51AP2Q09MP3 1159 aa16.83■□□□□ 0.28
SMARCA4-219ENST00000592604 FUT2Q10981 343 aa16.83■□□□□ 0.28
SMARCA4-219ENST00000592604 EARS2Q5JPH6 523 aaKnown RBP16.83■□□□□ 0.28
SMARCA4-219ENST00000592604 SLC35F6Q8N357 371 aa16.83■□□□□ 0.28
SMARCA4-219ENST00000592604 UBAC1Q9BSL1 405 aa16.83■□□□□ 0.28
SMARCA4-219ENST00000592604 STRCP1A6NGW2 1772 aa16.83■□□□□ 0.28
SMARCA4-219ENST00000592604 PRPF3O43395 683 aaKnown RBP16.83■□□□□ 0.28
SMARCA4-219ENST00000592604 CASP1P29466 404 aa16.83■□□□□ 0.28
SMARCA4-219ENST00000592604 AKAP17AQ02040 695 aaKnown RBP16.83■□□□□ 0.28
SMARCA4-219ENST00000592604 PPARAQ07869 468 aa16.83■□□□□ 0.28
SMARCA4-219ENST00000592604 ZSCAN26Q16670 478 aa16.83■□□□□ 0.28
SMARCA4-219ENST00000592604 TUBBP07437 444 aa16.82■□□□□ 0.28
SMARCA4-219ENST00000592604 WHAMMP3Q1A5X7 153 aa16.82■□□□□ 0.28
SMARCA4-219ENST00000592604 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.82■□□□□ 0.28
SMARCA4-219ENST00000592604 VPS54Q9P1Q0 977 aa16.82■□□□□ 0.28
SMARCA4-219ENST00000592604 ANAPC4Q9UJX5 808 aa16.82■□□□□ 0.28
SMARCA4-219ENST00000592604 SMYD4Q8IYR2 804 aaPredicted RBP16.82■□□□□ 0.28
SMARCA4-219ENST00000592604 IQUBQ8NA54 791 aa16.82■□□□□ 0.28
SMARCA4-219ENST00000592604 GOLGA5Q8TBA6 731 aa16.82■□□□□ 0.28
SMARCA4-219ENST00000592604 NAPGQ99747 312 aaPredicted RBP16.82■□□□□ 0.28
SMARCA4-219ENST00000592604 ERVV-1B6SEH8 477 aa16.81■□□□□ 0.28
SMARCA4-219ENST00000592604 ERVK-24P63145 666 aa16.81■□□□□ 0.28
SMARCA4-219ENST00000592604 PIP4K2BP78356 416 aa16.81■□□□□ 0.28
SMARCA4-219ENST00000592604 TNFRSF25Q93038 417 aa16.81■□□□□ 0.28
SMARCA4-219ENST00000592604 MYH2Q9UKX2 1941 aa16.81■□□□□ 0.28
SMARCA4-219ENST00000592604 ARHGAP25P42331 645 aa16.81■□□□□ 0.28
SMARCA4-219ENST00000592604 GYS2P54840 703 aa16.81■□□□□ 0.28
SMARCA4-219ENST00000592604 KRT31Q15323 416 aa16.81■□□□□ 0.28
SMARCA4-219ENST00000592604 ACRBPQ8NEB7 543 aa16.81■□□□□ 0.28
SMARCA4-219ENST00000592604 ESR2Q92731 530 aa16.81■□□□□ 0.28
SMARCA4-219ENST00000592604 PDE11AQ9HCR9 933 aa16.81■□□□□ 0.28
SMARCA4-219ENST00000592604 ABCB6Q9NP58 842 aa16.81■□□□□ 0.28
SMARCA4-219ENST00000592604 ABHD10Q9NUJ1 306 aa16.81■□□□□ 0.28
SMARCA4-219ENST00000592604 TNKSO95271 1327 aa16.81■□□□□ 0.28
SMARCA4-219ENST00000592604 PLCH1Q4KWH8 1693 aa16.81■□□□□ 0.28
SMARCA4-219ENST00000592604 CYP19A1P11511 503 aaPredicted RBP16.8■□□□□ 0.28
SMARCA4-219ENST00000592604 SPAG1Q07617 926 aa16.8■□□□□ 0.28
SMARCA4-219ENST00000592604 TRIM14Q14142 442 aa16.8■□□□□ 0.28
SMARCA4-219ENST00000592604 E2F4Q16254 413 aa16.8■□□□□ 0.28
SMARCA4-219ENST00000592604 CYP26C1Q6V0L0 522 aa16.8■□□□□ 0.28
SMARCA4-219ENST00000592604 CDC5LQ99459 802 aaKnown RBP16.8■□□□□ 0.28
SMARCA4-219ENST00000592604 RWDD2AQ9UIY3 292 aa16.8■□□□□ 0.28
SMARCA4-219ENST00000592604 CTAGE15A4D2H0 777 aa16.8■□□□□ 0.28
SMARCA4-219ENST00000592604 EIF3JO75822 258 aaKnown RBP16.8■□□□□ 0.28
SMARCA4-219ENST00000592604 CTAGE8P0CG41 777 aa16.8■□□□□ 0.28
SMARCA4-219ENST00000592604 ATP2C1P98194 919 aaPredicted RBP16.8■□□□□ 0.28
SMARCA4-219ENST00000592604 CTAGE6Q86UF2 777 aa16.8■□□□□ 0.28
SMARCA4-219ENST00000592604 CTAGE4Q8IX94 777 aa16.8■□□□□ 0.28
SMARCA4-219ENST00000592604 ZNF34Q8IZ26 560 aa16.8■□□□□ 0.28
SMARCA4-219ENST00000592604 WNT7AO00755 349 aa16.8■□□□□ 0.28
SMARCA4-219ENST00000592604 GBP3Q9H0R5 595 aa16.8■□□□□ 0.28
SMARCA4-219ENST00000592604 CTNND2Q9UQB3 1225 aa16.8■□□□□ 0.28
SMARCA4-219ENST00000592604 XDHP47989 1333 aa16.79■□□□□ 0.28
SMARCA4-219ENST00000592604 SNAP23O00161 211 aa16.79■□□□□ 0.28
SMARCA4-219ENST00000592604 N4BP3O15049 544 aa16.79■□□□□ 0.28
SMARCA4-219ENST00000592604 ABL1P00519 1130 aa16.79■□□□□ 0.28
SMARCA4-219ENST00000592604 COPB1P53618 953 aaKnown RBP16.79■□□□□ 0.28
SMARCA4-219ENST00000592604 AMPD2Q01433 879 aa16.79■□□□□ 0.28
SMARCA4-219ENST00000592604 MCM6Q14566 821 aa16.79■□□□□ 0.28
SMARCA4-219ENST00000592604 NPY5RQ15761 445 aa16.79■□□□□ 0.28
SMARCA4-219ENST00000592604 CWC15Q9P013 229 aaKnown RBP16.79■□□□□ 0.28
SMARCA4-219ENST00000592604 FEZ2Q9UHY8 353 aaPredicted RBP16.79■□□□□ 0.28
SMARCA4-219ENST00000592604 ITGB4P16144 1822 aa16.79■□□□□ 0.28
SMARCA4-219ENST00000592604 ACTN2P35609 894 aa16.79■□□□□ 0.28
SMARCA4-219ENST00000592604 LMAN1P49257 510 aa16.79■□□□□ 0.28
SMARCA4-219ENST00000592604 PYM1Q9BRP8 204 aaKnown RBP16.79■□□□□ 0.28
SMARCA4-219ENST00000592604 RBM28Q9NW13 759 aaKnown RBP16.79■□□□□ 0.28
SMARCA4-219ENST00000592604 RNF225M0QZC1 329 aaPredicted RBP16.78■□□□□ 0.28
SMARCA4-219ENST00000592604 CCT6AP40227 531 aaKnown RBP16.78■□□□□ 0.28
SMARCA4-219ENST00000592604 VSNL1P62760 191 aa16.78■□□□□ 0.28
SMARCA4-219ENST00000592604 ZNF174Q15697 407 aa16.78■□□□□ 0.28
SMARCA4-219ENST00000592604 TTC38Q5R3I4 469 aa16.78■□□□□ 0.28
SMARCA4-219ENST00000592604 ENAHQ8N8S7 591 aaPredicted RBP16.78■□□□□ 0.28
SMARCA4-219ENST00000592604 MIGA1Q8NAN2 632 aa16.78■□□□□ 0.28
SMARCA4-219ENST00000592604 BRMS1Q9HCU9 246 aa16.78■□□□□ 0.28
SMARCA4-219ENST00000592604 V9GY48 417 aaPredicted RBP16.78■□□□□ 0.28
SMARCA4-219ENST00000592604 BCAMP50895 628 aa16.78■□□□□ 0.28
SMARCA4-219ENST00000592604 PTGDRQ13258 359 aa16.78■□□□□ 0.28
SMARCA4-219ENST00000592604 RRAGBQ5VZM2 374 aa16.78■□□□□ 0.28
SMARCA4-219ENST00000592604 PDXDC2PQ6P474 469 aa16.78■□□□□ 0.28
SMARCA4-219ENST00000592604 SLC4A9Q96Q91 983 aa16.78■□□□□ 0.28
SMARCA4-219ENST00000592604 ZSCAN10Q96SZ4 725 aaPredicted RBP16.78■□□□□ 0.28
SMARCA4-219ENST00000592604 ZBTB1Q9Y2K1 713 aa16.78■□□□□ 0.28
SMARCA4-219ENST00000592604 COL22A1Q8NFW1 1626 aaPredicted RBP16.78■□□□□ 0.28
SMARCA4-219ENST00000592604 DISP2A7MBM2 1401 aa16.77■□□□□ 0.28
SMARCA4-219ENST00000592604 GTPBP6O43824 516 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms