RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 NAV1Q8NEY1 1877 aa11.94□□□□□ -0.5
BRCA1-227ENST00000591849 A0A1W2PRG0 241 aa11.94□□□□□ -0.5
BRCA1-227ENST00000591849 ZNF213O14771 459 aa11.94□□□□□ -0.5
BRCA1-227ENST00000591849 GSPT1P15170 499 aaKnown RBP11.94□□□□□ -0.5
BRCA1-227ENST00000591849 SOX10P56693 466 aa11.94□□□□□ -0.5
BRCA1-227ENST00000591849 FAM110CQ1W6H9 321 aa11.94□□□□□ -0.5
BRCA1-227ENST00000591849 NBPF11Q86T75 865 aa11.94□□□□□ -0.5
BRCA1-227ENST00000591849 LPAR1Q92633 364 aa11.94□□□□□ -0.5
BRCA1-227ENST00000591849 VCPKMTQ9H867 229 aa11.94□□□□□ -0.5
BRCA1-227ENST00000591849 HOXC10Q9NYD6 342 aa11.94□□□□□ -0.5
BRCA1-227ENST00000591849 BIN2Q9UBW5 565 aaPredicted RBP11.94□□□□□ -0.5
BRCA1-227ENST00000591849 FOCADQ5VW36 1801 aa11.94□□□□□ -0.5
BRCA1-227ENST00000591849 ROBO3Q96MS0 1386 aa11.93□□□□□ -0.5
BRCA1-227ENST00000591849 CDK5RAP2Q96SN8 1893 aa11.93□□□□□ -0.5
BRCA1-227ENST00000591849 MYPNQ86TC9 1320 aa11.93□□□□□ -0.5
BRCA1-227ENST00000591849 FLOT1O75955 427 aa11.93□□□□□ -0.5
BRCA1-227ENST00000591849 HAND2P61296 217 aa11.93□□□□□ -0.5
BRCA1-227ENST00000591849 CCNA1P78396 465 aa11.93□□□□□ -0.5
BRCA1-227ENST00000591849 COG2Q14746 738 aa11.93□□□□□ -0.5
BRCA1-227ENST00000591849 SLC9C1Q4G0N8 1177 aa11.93□□□□□ -0.5
BRCA1-227ENST00000591849 WDR78Q5VTH9 848 aa11.93□□□□□ -0.5
BRCA1-227ENST00000591849 MFSD6Q6ZSS7 791 aa11.93□□□□□ -0.5
BRCA1-227ENST00000591849 NEDD1Q8NHV4 660 aa11.93□□□□□ -0.5
BRCA1-227ENST00000591849 TRIM47Q96LD4 638 aa11.93□□□□□ -0.5
BRCA1-227ENST00000591849 RNF41Q9H4P4 317 aaPredicted RBP11.93□□□□□ -0.5
BRCA1-227ENST00000591849 NYAP2Q9P242 653 aa11.93□□□□□ -0.5
BRCA1-227ENST00000591849 SRRDQ9UH36 339 aa11.93□□□□□ -0.5
BRCA1-227ENST00000591849 ANAPC4Q9UJX5 808 aa11.93□□□□□ -0.5
BRCA1-227ENST00000591849 CTDP1Q9Y5B0 961 aaPredicted RBP11.93□□□□□ -0.5
BRCA1-227ENST00000591849 PTCH2Q9Y6C5 1203 aa11.93□□□□□ -0.5
BRCA1-227ENST00000591849 MYH7P12883 1935 aa11.93□□□□□ -0.5
BRCA1-227ENST00000591849 MKI67P46013 3256 aaKnown RBP11.93□□□□□ -0.5
BRCA1-227ENST00000591849 SIPA1L1O43166 1804 aa11.93□□□□□ -0.5
BRCA1-227ENST00000591849 WDR46O15213 610 aaKnown RBP11.92□□□□□ -0.5
BRCA1-227ENST00000591849 TTLL1O95922 423 aa11.92□□□□□ -0.5
BRCA1-227ENST00000591849 CHMLP26374 656 aa11.92□□□□□ -0.5
BRCA1-227ENST00000591849 IMMTQ16891 758 aaKnown RBP11.92□□□□□ -0.5
BRCA1-227ENST00000591849 KIAA1211Q6ZU35 1233 aa11.92□□□□□ -0.5
BRCA1-227ENST00000591849 SIAH1Q8IUQ4 282 aa11.92□□□□□ -0.5
BRCA1-227ENST00000591849 CEP95Q96GE4 821 aa11.92□□□□□ -0.5
BRCA1-227ENST00000591849 DSCC1Q9BVC3 393 aa11.92□□□□□ -0.5
BRCA1-227ENST00000591849 INCENPQ9NQS7 918 aa11.92□□□□□ -0.5
BRCA1-227ENST00000591849 MTMR4Q9NYA4 1195 aa11.92□□□□□ -0.5
BRCA1-227ENST00000591849 MORF4L1Q9UBU8 362 aa11.92□□□□□ -0.5
BRCA1-227ENST00000591849 RABGAP1Q9Y3P9 1069 aa11.92□□□□□ -0.5
BRCA1-227ENST00000591849 F5H6K3 240 aa11.91□□□□□ -0.5
BRCA1-227ENST00000591849 FOXP2O15409 715 aa11.91□□□□□ -0.5
BRCA1-227ENST00000591849 ORC4O43929 436 aa11.91□□□□□ -0.5
BRCA1-227ENST00000591849 ERVK-9P63128 1117 aa11.91□□□□□ -0.5
BRCA1-227ENST00000591849 ERVK-24P63145 666 aa11.91□□□□□ -0.5
BRCA1-227ENST00000591849 PRKCZQ05513 592 aa11.91□□□□□ -0.5
BRCA1-227ENST00000591849 KLRC3Q07444 240 aa11.91□□□□□ -0.5
BRCA1-227ENST00000591849 PLS1Q14651 629 aa11.91□□□□□ -0.5
BRCA1-227ENST00000591849 AKNAD1Q5T1N1 836 aa11.91□□□□□ -0.5
BRCA1-227ENST00000591849 CASC1Q6TDU7 716 aa11.91□□□□□ -0.5
BRCA1-227ENST00000591849 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.91□□□□□ -0.5
BRCA1-227ENST00000591849 TMEM106CQ9BVX2 250 aa11.91□□□□□ -0.5
BRCA1-227ENST00000591849 RBPJLQ9UBG7 517 aa11.91□□□□□ -0.5
BRCA1-227ENST00000591849 STX8Q9UNK0 236 aa11.91□□□□□ -0.5
BRCA1-227ENST00000591849 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.91□□□□□ -0.5
BRCA1-227ENST00000591849 BRCA2P51587 3418 aa11.91□□□□□ -0.5
BRCA1-227ENST00000591849 ZMYM6O95789 1325 aa11.9□□□□□ -0.5
BRCA1-227ENST00000591849 RAD50Q92878 1312 aa11.9□□□□□ -0.5
BRCA1-227ENST00000591849 BAZ2AQ9UIF9 1905 aaKnown RBP11.9□□□□□ -0.5
BRCA1-227ENST00000591849 PEX10O60683 326 aa11.9□□□□□ -0.5
BRCA1-227ENST00000591849 MYCP01106 439 aaPredicted RBP11.9□□□□□ -0.5
BRCA1-227ENST00000591849 PCP11498 1178 aaKnown RBP11.9□□□□□ -0.5
BRCA1-227ENST00000591849 CTGFP29279 349 aa11.9□□□□□ -0.5
BRCA1-227ENST00000591849 MAPK4P31152 587 aa11.9□□□□□ -0.5
BRCA1-227ENST00000591849 GRK4P32298 578 aa11.9□□□□□ -0.5
BRCA1-227ENST00000591849 DSG3P32926 999 aa11.9□□□□□ -0.5
BRCA1-227ENST00000591849 FLT3LGP49771 235 aa11.9□□□□□ -0.5
BRCA1-227ENST00000591849 CAP1Q01518 475 aa11.9□□□□□ -0.5
BRCA1-227ENST00000591849 IKQ13123 557 aaPredicted RBP11.9□□□□□ -0.5
BRCA1-227ENST00000591849 KIAA1755Q5JYT7 1200 aa11.9□□□□□ -0.5
BRCA1-227ENST00000591849 FAM83BQ5T0W9 1011 aa11.9□□□□□ -0.5
BRCA1-227ENST00000591849 PRPF38BQ5VTL8 546 aaKnown RBP11.9□□□□□ -0.5
BRCA1-227ENST00000591849 LRRC47Q8N1G4 583 aaKnown RBP11.9□□□□□ -0.5
BRCA1-227ENST00000591849 MB21D1Q8N884 522 aa11.9□□□□□ -0.5
BRCA1-227ENST00000591849 ESR2Q92731 530 aa11.9□□□□□ -0.5
BRCA1-227ENST00000591849 TXNRD2Q9NNW7 524 aa11.9□□□□□ -0.5
BRCA1-227ENST00000591849 PCDH10Q9P2E7 1040 aa11.9□□□□□ -0.5
BRCA1-227ENST00000591849 MTMR7Q9Y216 660 aa11.9□□□□□ -0.5
BRCA1-227ENST00000591849 IVNS1ABPQ9Y6Y0 642 aa11.9□□□□□ -0.5
BRCA1-227ENST00000591849 IGKV6D-41A0A0C4DH26 115 aa11.89□□□□□ -0.51
BRCA1-227ENST00000591849 SPDYE16A6NNV3 312 aaPredicted RBP11.89□□□□□ -0.51
BRCA1-227ENST00000591849 ADCY3O60266 1144 aa11.89□□□□□ -0.51
BRCA1-227ENST00000591849 NDUFB10O96000 172 aa11.89□□□□□ -0.51
BRCA1-227ENST00000591849 UBXN2AP68543 259 aa11.89□□□□□ -0.51
BRCA1-227ENST00000591849 Q3C1V9 767 aa11.89□□□□□ -0.51
BRCA1-227ENST00000591849 ERICH6BQ5W0A0 696 aa11.89□□□□□ -0.51
BRCA1-227ENST00000591849 SLFN13Q68D06 897 aa11.89□□□□□ -0.51
BRCA1-227ENST00000591849 PLEKHH3Q7Z736 793 aa11.89□□□□□ -0.51
BRCA1-227ENST00000591849 SH3TC2Q8TF17 1288 aa11.89□□□□□ -0.51
BRCA1-227ENST00000591849 STAG1Q8WVM7 1258 aa11.89□□□□□ -0.51
BRCA1-227ENST00000591849 MKL1Q969V6 931 aa11.89□□□□□ -0.51
BRCA1-227ENST00000591849 CHMP4CQ96CF2 233 aa11.89□□□□□ -0.51
BRCA1-227ENST00000591849 NUP88Q99567 741 aaPredicted RBP11.89□□□□□ -0.51
BRCA1-227ENST00000591849 NUDT12Q9BQG2 462 aa11.89□□□□□ -0.51
BRCA1-227ENST00000591849 PPP4R2Q9NY27 417 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms