RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 ZMYM1Q5SVZ6 1142 aa13.72□□□□□ -0.21
SMARCA4-217ENST00000591595 CCDC13Q8IYE1 715 aa13.72□□□□□ -0.21
SMARCA4-217ENST00000591595 ENGASEQ8NFI3 743 aa13.72□□□□□ -0.21
SMARCA4-217ENST00000591595 PLBD2Q8NHP8 589 aa13.72□□□□□ -0.21
SMARCA4-217ENST00000591595 ALS2CR12Q96Q35 445 aa13.72□□□□□ -0.21
SMARCA4-217ENST00000591595 TRIM4Q9C037 500 aa13.72□□□□□ -0.21
SMARCA4-217ENST00000591595 CEP126Q9P2H0 1117 aa13.72□□□□□ -0.21
SMARCA4-217ENST00000591595 CLIC4Q9Y696 253 aa13.72□□□□□ -0.21
SMARCA4-217ENST00000591595 SPTLC2O15270 562 aa13.72□□□□□ -0.21
SMARCA4-217ENST00000591595 NAT1P18440 290 aa13.72□□□□□ -0.21
SMARCA4-217ENST00000591595 EXOSC10Q01780 885 aaKnown RBP13.72□□□□□ -0.21
SMARCA4-217ENST00000591595 KIF4BQ2VIQ3 1234 aa13.72□□□□□ -0.21
SMARCA4-217ENST00000591595 ADALQ6DHV7 355 aa13.72□□□□□ -0.21
SMARCA4-217ENST00000591595 ZNF274Q96GC6 653 aaPredicted RBP13.72□□□□□ -0.21
SMARCA4-217ENST00000591595 PAPOLBQ9NRJ5 636 aaKnown RBP13.72□□□□□ -0.21
SMARCA4-217ENST00000591595 CWC25Q9NXE8 425 aaPredicted RBP13.72□□□□□ -0.21
SMARCA4-217ENST00000591595 ERICH2A1L162 156 aa13.71□□□□□ -0.21
SMARCA4-217ENST00000591595 SMNDC1O75940 238 aaKnown RBP eCLIP13.71□□□□□ -0.211e-8■□□□□ 10.1
SMARCA4-217ENST00000591595 LMOD1P29536 600 aaPredicted RBP13.71□□□□□ -0.21
SMARCA4-217ENST00000591595 SCNN1BP51168 640 aa13.71□□□□□ -0.21
SMARCA4-217ENST00000591595 TTC39AQ5SRH9 613 aa13.71□□□□□ -0.21
SMARCA4-217ENST00000591595 XPO4Q9C0E2 1151 aaKnown RBP13.71□□□□□ -0.21
SMARCA4-217ENST00000591595 ATP6V1G1O75348 118 aa13.71□□□□□ -0.21
SMARCA4-217ENST00000591595 KIF4AO95239 1232 aa13.71□□□□□ -0.21
SMARCA4-217ENST00000591595 MARCKSP29966 332 aaPredicted RBP13.71□□□□□ -0.21
SMARCA4-217ENST00000591595 CCDC15Q0P6D6 951 aa13.71□□□□□ -0.21
SMARCA4-217ENST00000591595 SRGAP1Q7Z6B7 1085 aa13.71□□□□□ -0.21
SMARCA4-217ENST00000591595 KCNG4Q8TDN1 519 aa13.71□□□□□ -0.21
SMARCA4-217ENST00000591595 CABLES1Q8TDN4 633 aa13.71□□□□□ -0.21
SMARCA4-217ENST00000591595 CAPS2Q9BXY5 557 aa13.71□□□□□ -0.21
SMARCA4-217ENST00000591595 KIAA1468Q9P260 1216 aa13.71□□□□□ -0.21
SMARCA4-217ENST00000591595 TRPC6Q9Y210 931 aa13.71□□□□□ -0.21
SMARCA4-217ENST00000591595 VWA3AA6NCI4 1184 aa13.71□□□□□ -0.22
SMARCA4-217ENST00000591595 NDUFAB1O14561 156 aa13.71□□□□□ -0.22
SMARCA4-217ENST00000591595 ZSCAN12O43309 604 aa13.71□□□□□ -0.22
SMARCA4-217ENST00000591595 VSNL1P62760 191 aa13.71□□□□□ -0.22
SMARCA4-217ENST00000591595 CYB5D1Q6P9G0 228 aa13.71□□□□□ -0.22
SMARCA4-217ENST00000591595 FMR1NBQ8N0W7 255 aaPredicted RBP13.71□□□□□ -0.22
SMARCA4-217ENST00000591595 DCAF5Q96JK2 942 aa13.71□□□□□ -0.22
SMARCA4-217ENST00000591595 SPAG5Q96R06 1193 aa13.71□□□□□ -0.22
SMARCA4-217ENST00000591595 PRC1O43663 620 aa13.7□□□□□ -0.22
SMARCA4-217ENST00000591595 OPA1O60313 960 aa13.7□□□□□ -0.22
SMARCA4-217ENST00000591595 GCLCP48506 637 aaPredicted RBP13.7□□□□□ -0.22
SMARCA4-217ENST00000591595 TPX2Q9ULW0 747 aaKnown RBP13.7□□□□□ -0.22
SMARCA4-217ENST00000591595 NUB1Q9Y5A7 615 aa13.7□□□□□ -0.22
SMARCA4-217ENST00000591595 RGPD2P0DJD1 1756 aa13.7□□□□□ -0.22
SMARCA4-217ENST00000591595 RFX7Q2KHR2 1363 aa13.7□□□□□ -0.22
SMARCA4-217ENST00000591595 M0R2C6 588 aa13.7□□□□□ -0.22
SMARCA4-217ENST00000591595 ZNF202O95125 648 aa13.7□□□□□ -0.22
SMARCA4-217ENST00000591595 PPFIA1Q13136 1202 aa13.7□□□□□ -0.22
SMARCA4-217ENST00000591595 MICALCLQ6ZW33 695 aa13.7□□□□□ -0.22
SMARCA4-217ENST00000591595 ILDR1Q86SU0 546 aaPredicted RBP13.7□□□□□ -0.22
SMARCA4-217ENST00000591595 PROSER2Q86WR7 435 aaPredicted RBP13.7□□□□□ -0.22
SMARCA4-217ENST00000591595 LINC00301Q8NCQ3 95 aa13.7□□□□□ -0.22
SMARCA4-217ENST00000591595 TRIM58Q8NG06 486 aa13.7□□□□□ -0.22
SMARCA4-217ENST00000591595 OSBP2Q969R2 916 aa13.7□□□□□ -0.22
SMARCA4-217ENST00000591595 RBM41Q96IZ5 413 aaKnown RBP13.7□□□□□ -0.22
SMARCA4-217ENST00000591595 PHACTR1Q9C0D0 580 aa13.7□□□□□ -0.22
SMARCA4-217ENST00000591595 CORO1CQ9ULV4 474 aaPredicted RBP13.7□□□□□ -0.22
SMARCA4-217ENST00000591595 OVOS2A0A0G2JMS6 1433 aa13.7□□□□□ -0.22
SMARCA4-217ENST00000591595 EYA2O00167 538 aa13.69□□□□□ -0.22
SMARCA4-217ENST00000591595 RNF8O76064 485 aa13.69□□□□□ -0.22
SMARCA4-217ENST00000591595 FDPSP14324 419 aaKnown RBP13.69□□□□□ -0.22
SMARCA4-217ENST00000591595 GNGT1P63211 74 aa13.69□□□□□ -0.22
SMARCA4-217ENST00000591595 ACCSLQ4AC99 568 aa13.69□□□□□ -0.22
SMARCA4-217ENST00000591595 RNF187Q5TA31 235 aaPredicted RBP13.69□□□□□ -0.22
SMARCA4-217ENST00000591595 ATG9AQ7Z3C6 839 aa13.69□□□□□ -0.22
SMARCA4-217ENST00000591595 PUS3Q9BZE2 481 aaKnown RBP13.69□□□□□ -0.22
SMARCA4-217ENST00000591595 VIPAS39Q9H9C1 493 aa13.69□□□□□ -0.22
SMARCA4-217ENST00000591595 PUF60Q9UHX1 559 aaKnown RBP13.69□□□□□ -0.22
SMARCA4-217ENST00000591595 GRIN2DO15399 1336 aa13.69□□□□□ -0.22
SMARCA4-217ENST00000591595 FERP16591 822 aa13.69□□□□□ -0.22
SMARCA4-217ENST00000591595 CCDC57Q2TAC2 916 aa13.69□□□□□ -0.22
SMARCA4-217ENST00000591595 YTHDF3Q7Z739 585 aaKnown RBP13.69□□□□□ -0.22
SMARCA4-217ENST00000591595 C17orf50Q8WW18 174 aa13.69□□□□□ -0.22
SMARCA4-217ENST00000591595 SERPINC1P01008 464 aa13.69□□□□□ -0.22
SMARCA4-217ENST00000591595 NSMCE1Q8WV22 266 aa13.69□□□□□ -0.22
SMARCA4-217ENST00000591595 RIN2Q8WYP3 895 aaPredicted RBP13.69□□□□□ -0.22
SMARCA4-217ENST00000591595 DDX17Q92841 729 aaKnown RBP13.69□□□□□ -0.22
SMARCA4-217ENST00000591595 MARF1Q9Y4F3 1742 aaKnown RBP13.68□□□□□ -0.22
SMARCA4-217ENST00000591595 CYP27B1O15528 508 aa13.68□□□□□ -0.22
SMARCA4-217ENST00000591595 RHOXF2BP0C7M4 288 aa13.68□□□□□ -0.22
SMARCA4-217ENST00000591595 SFSWAPQ12872 951 aaKnown RBP13.68□□□□□ -0.22
SMARCA4-217ENST00000591595 BRAPQ7Z569 592 aa13.68□□□□□ -0.22
SMARCA4-217ENST00000591595 RHOXF2Q9BQY4 288 aa13.68□□□□□ -0.22
SMARCA4-217ENST00000591595 CUTAO60888 179 aa13.68□□□□□ -0.22
SMARCA4-217ENST00000591595 A1BGP04217 495 aa13.68□□□□□ -0.22
SMARCA4-217ENST00000591595 GNAT1P11488 350 aa13.68□□□□□ -0.22
SMARCA4-217ENST00000591595 FOXO4P98177 505 aa13.68□□□□□ -0.22
SMARCA4-217ENST00000591595 GNPTABQ3T906 1256 aa13.68□□□□□ -0.22
SMARCA4-217ENST00000591595 CCDC47Q96A33 483 aaKnown RBP13.68□□□□□ -0.22
SMARCA4-217ENST00000591595 TSC22D3Q99576 134 aa13.68□□□□□ -0.22
SMARCA4-217ENST00000591595 ARPC5LQ9BPX5 153 aa13.68□□□□□ -0.22
SMARCA4-217ENST00000591595 KDM6AO15550 1401 aaPredicted RBP13.68□□□□□ -0.22
SMARCA4-217ENST00000591595 GOLGA6L7A0A1B0GV03 622 aa13.68□□□□□ -0.22
SMARCA4-217ENST00000591595 ZNF213O14771 459 aa13.68□□□□□ -0.22
SMARCA4-217ENST00000591595 CAPN15O75808 1086 aa13.68□□□□□ -0.22
SMARCA4-217ENST00000591595 RXRAP19793 462 aa13.68□□□□□ -0.22
SMARCA4-217ENST00000591595 SF3B2Q13435 895 aaKnown RBP13.68□□□□□ -0.22
SMARCA4-217ENST00000591595 FUKQ8N0W3 1084 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms