RNA–Protein interactions for RNA: ENST00000591226.1

TPM4-213, Transcript of tropomyosin 4, humanhuman

Gene TPM4, Length 2,672 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-213ENST00000591226 POTEAQ6S8J7 498 aa13□□□□□ -0.33
TPM4-213ENST00000591226 MTMR7Q9Y216 660 aa13□□□□□ -0.33
TPM4-213ENST00000591226 HPSEQ9Y251 543 aa13□□□□□ -0.33
TPM4-213ENST00000591226 G3V3G9 751 aa12.99□□□□□ -0.33
TPM4-213ENST00000591226 VEGFAP15692 232 aaPredicted RBP12.99□□□□□ -0.33
TPM4-213ENST00000591226 SYKP43405 635 aa12.99□□□□□ -0.33
TPM4-213ENST00000591226 SCNN1DP51172 638 aa12.99□□□□□ -0.33
TPM4-213ENST00000591226 EN1Q05925 392 aaPredicted RBP12.99□□□□□ -0.33
TPM4-213ENST00000591226 PICALMQ13492 652 aa12.99□□□□□ -0.33
TPM4-213ENST00000591226 NPY5RQ15761 445 aa12.99□□□□□ -0.33
TPM4-213ENST00000591226 CCDC178Q5BJE1 867 aa12.99□□□□□ -0.33
TPM4-213ENST00000591226 DCAF8Q5TAQ9 597 aa12.99□□□□□ -0.33
TPM4-213ENST00000591226 STAG2Q8N3U4 1231 aa12.99□□□□□ -0.33
TPM4-213ENST00000591226 KRI1Q8N9T8 703 aaKnown RBP12.99□□□□□ -0.33
TPM4-213ENST00000591226 EYA3Q99504 573 aa12.99□□□□□ -0.33
TPM4-213ENST00000591226 ZNF287Q9HBT7 754 aa12.99□□□□□ -0.33
TPM4-213ENST00000591226 ZNF219Q9P2Y4 722 aaPredicted RBP12.99□□□□□ -0.33
TPM4-213ENST00000591226 STX8Q9UNK0 236 aa12.99□□□□□ -0.33
TPM4-213ENST00000591226 SLX4Q8IY92 1834 aa12.99□□□□□ -0.33
TPM4-213ENST00000591226 H0YIN7 160 aa12.99□□□□□ -0.33
TPM4-213ENST00000591226 CAVIN2O95810 425 aa12.99□□□□□ -0.33
TPM4-213ENST00000591226 SCG2P13521 617 aa12.99□□□□□ -0.33
TPM4-213ENST00000591226 MSNP26038 577 aaKnown RBP12.99□□□□□ -0.33
TPM4-213ENST00000591226 CHRNA5P30532 468 aa12.99□□□□□ -0.33
TPM4-213ENST00000591226 GRM4Q14833 912 aa12.99□□□□□ -0.33
TPM4-213ENST00000591226 SLC15A2Q16348 729 aa12.99□□□□□ -0.33
TPM4-213ENST00000591226 TMEM47Q9BQJ4 181 aa12.99□□□□□ -0.33
TPM4-213ENST00000591226 DBNDD1Q9H9R9 158 aa12.99□□□□□ -0.33
TPM4-213ENST00000591226 ANO10Q9NW15 660 aa12.99□□□□□ -0.33
TPM4-213ENST00000591226 FAM237AA0A1B0GTK4 181 aa12.98□□□□□ -0.33
TPM4-213ENST00000591226 GRIN1Q05586 938 aa12.98□□□□□ -0.33
TPM4-213ENST00000591226 IQCB1Q15051 598 aa12.98□□□□□ -0.33
TPM4-213ENST00000591226 PFKFB3Q16875 520 aaPredicted RBP12.98□□□□□ -0.33
TPM4-213ENST00000591226 NOM1Q5C9Z4 860 aaKnown RBP12.98□□□□□ -0.33
TPM4-213ENST00000591226 STYK1Q6J9G0 422 aa12.98□□□□□ -0.33
TPM4-213ENST00000591226 KCNQ5Q9NR82 932 aa12.98□□□□□ -0.33
TPM4-213ENST00000591226 KIAA1468Q9P260 1216 aa12.98□□□□□ -0.33
TPM4-213ENST00000591226 MAD2L2Q9UI95 211 aa12.98□□□□□ -0.33
TPM4-213ENST00000591226 FBXO2Q9UK22 296 aaPredicted RBP12.98□□□□□ -0.33
TPM4-213ENST00000591226 ZKSCAN5Q9Y2L8 839 aa12.98□□□□□ -0.33
TPM4-213ENST00000591226 SPECC1Q5M775 1068 aa12.98□□□□□ -0.33
TPM4-213ENST00000591226 TNFRSF25Q93038 417 aa12.98□□□□□ -0.33
TPM4-213ENST00000591226 CAMKK2Q96RR4 588 aa12.98□□□□□ -0.33
TPM4-213ENST00000591226 DDX4Q9NQI0 724 aaKnown RBP12.98□□□□□ -0.33
TPM4-213ENST00000591226 SLC35G1Q2M3R5 365 aa12.97□□□□□ -0.33
TPM4-213ENST00000591226 RASGRP2Q7LDG7 609 aa12.97□□□□□ -0.33
TPM4-213ENST00000591226 NEDD1Q8NHV4 660 aa12.97□□□□□ -0.33
TPM4-213ENST00000591226 BRMS1Q9HCU9 246 aa12.97□□□□□ -0.33
TPM4-213ENST00000591226 GOLGB1Q14789 3259 aaKnown RBP12.97□□□□□ -0.33
TPM4-213ENST00000591226 TPM2P07951 284 aa12.97□□□□□ -0.33
TPM4-213ENST00000591226 PTPREP23469 700 aa12.97□□□□□ -0.33
TPM4-213ENST00000591226 TIGD1Q96MW7 591 aa12.97□□□□□ -0.33
TPM4-213ENST00000591226 STK32BQ9NY57 414 aa12.97□□□□□ -0.33
TPM4-213ENST00000591226 TRIM75PA6NK02 468 aa12.96□□□□□ -0.33
TPM4-213ENST00000591226 WNT7AO00755 349 aa12.96□□□□□ -0.33
TPM4-213ENST00000591226 ADAMTS3O15072 1205 aa12.96□□□□□ -0.33
TPM4-213ENST00000591226 NLRP5P59047 1200 aa12.96□□□□□ -0.33
TPM4-213ENST00000591226 GPKOWQ92917 476 aaPredicted RBP eCLIP12.96□□□□□ -0.33
TPM4-213ENST00000591226 USP40Q9NVE5 1235 aa12.96□□□□□ -0.33
TPM4-213ENST00000591226 KCNH3Q9ULD8 1083 aa12.96□□□□□ -0.33
TPM4-213ENST00000591226 CEP131Q9UPN4 1083 aa12.96□□□□□ -0.33
TPM4-213ENST00000591226 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.96□□□□□ -0.336e-7■■■■□ 19.6
TPM4-213ENST00000591226 BIN1O00499 593 aa12.96□□□□□ -0.33
TPM4-213ENST00000591226 CEP57L1Q8IYX8 460 aa12.96□□□□□ -0.33
TPM4-213ENST00000591226 CEP95Q96GE4 821 aa12.96□□□□□ -0.33
TPM4-213ENST00000591226 SCN9AQ15858 1988 aa12.96□□□□□ -0.34
TPM4-213ENST00000591226 GOLGA8HP0CJ92 632 aa12.96□□□□□ -0.34
TPM4-213ENST00000591226 GNAQP50148 359 aa12.96□□□□□ -0.34
TPM4-213ENST00000591226 DPCR1Q3MIW9 517 aa12.96□□□□□ -0.34
TPM4-213ENST00000591226 CDC42EP5Q6NZY7 148 aa12.96□□□□□ -0.34
TPM4-213ENST00000591226 PODNQ7Z5L7 613 aa12.96□□□□□ -0.34
TPM4-213ENST00000591226 DHX40Q8IX18 779 aaKnown RBP12.96□□□□□ -0.34
TPM4-213ENST00000591226 ZC3H15Q8WU90 426 aaKnown RBP12.96□□□□□ -0.34
TPM4-213ENST00000591226 TEKT1Q969V4 418 aa12.96□□□□□ -0.34
TPM4-213ENST00000591226 SRPRBQ9Y5M8 271 aaKnown RBP12.96□□□□□ -0.34
TPM4-213ENST00000591226 PALM3A6NDB9 673 aaPredicted RBP12.95□□□□□ -0.34
TPM4-213ENST00000591226 GOLGA6L19H0YKK7 550 aa12.95□□□□□ -0.34
TPM4-213ENST00000591226 CYTH3O43739 400 aa12.95□□□□□ -0.34
TPM4-213ENST00000591226 ZRSR1Q15695 479 aaKnown RBP12.95□□□□□ -0.34
TPM4-213ENST00000591226 LONRF3Q496Y0 759 aa12.95□□□□□ -0.34
TPM4-213ENST00000591226 APOBEC3HQ6NTF7 200 aaKnown RBP12.95□□□□□ -0.34
TPM4-213ENST00000591226 SPC24Q8NBT2 197 aa12.95□□□□□ -0.34
TPM4-213ENST00000591226 ECE2O60344 883 aa12.95□□□□□ -0.34
TPM4-213ENST00000591226 GABPAQ06546 454 aa12.95□□□□□ -0.34
TPM4-213ENST00000591226 HHIPL2Q6UWX4 724 aa12.95□□□□□ -0.34
TPM4-213ENST00000591226 ZNF830Q96NB3 372 aaPredicted RBP12.95□□□□□ -0.34
TPM4-213ENST00000591226 CRKP46108 304 aa12.94□□□□□ -0.34
TPM4-213ENST00000591226 ZNF75DP51815 510 aa12.94□□□□□ -0.34
TPM4-213ENST00000591226 PNOCQ13519 176 aa12.94□□□□□ -0.34
TPM4-213ENST00000591226 TYW1BQ6NUM6 668 aa12.94□□□□□ -0.34
TPM4-213ENST00000591226 KRBA2Q6ZNG9 492 aa12.94□□□□□ -0.34
TPM4-213ENST00000591226 PIK3AP1Q6ZUJ8 805 aa12.94□□□□□ -0.34
TPM4-213ENST00000591226 METTL16Q86W50 562 aaKnown RBP12.94□□□□□ -0.34
TPM4-213ENST00000591226 KIAA0825Q8IV33 1275 aa12.94□□□□□ -0.34
TPM4-213ENST00000591226 AOPEPQ8N6M6 819 aa12.94□□□□□ -0.34
TPM4-213ENST00000591226 CNKSR1Q969H4 720 aa12.94□□□□□ -0.34
TPM4-213ENST00000591226 TRIM5Q9C035 493 aa12.94□□□□□ -0.34
TPM4-213ENST00000591226 PDGFDQ9GZP0 370 aaPredicted RBP12.94□□□□□ -0.34
TPM4-213ENST00000591226 CSRNP2Q9H175 543 aa12.94□□□□□ -0.34
TPM4-213ENST00000591226 CPVLQ9H3G5 476 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms