RNA–Protein interactions for RNA: ENST00000590064.1

APBA3-205, Transcript of amyloid beta precursor protein binding family A member 3, humanhuman

TSL 1 (best)

Gene APBA3, Length 4,250 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBA3-205ENST00000590064 KAT14Q9H8E8 782 aa18.12■□□□□ 0.49
APBA3-205ENST00000590064 MYO1AQ9UBC5 1043 aa18.12■□□□□ 0.49
APBA3-205ENST00000590064 PTGDRQ13258 359 aa18.12■□□□□ 0.49
APBA3-205ENST00000590064 TYW1BQ6NUM6 668 aa18.12■□□□□ 0.49
APBA3-205ENST00000590064 HEATR3Q7Z4Q2 680 aa18.12■□□□□ 0.49
APBA3-205ENST00000590064 TICAM2Q86XR7 235 aa18.12■□□□□ 0.49
APBA3-205ENST00000590064 ZSWIM5Q9P217 1185 aa18.12■□□□□ 0.49
APBA3-205ENST00000590064 NDUFA10O95299 355 aa18.12■□□□□ 0.49
APBA3-205ENST00000590064 GNAT2P19087 354 aa18.12■□□□□ 0.49
APBA3-205ENST00000590064 PDE4DQ08499 809 aa18.11■□□□□ 0.49
APBA3-205ENST00000590064 KRT31Q15323 416 aa18.11■□□□□ 0.49
APBA3-205ENST00000590064 ILDR1Q86SU0 546 aaPredicted RBP18.11■□□□□ 0.49
APBA3-205ENST00000590064 ANKRD13CQ8N6S4 541 aa18.11■□□□□ 0.49
APBA3-205ENST00000590064 IFIH1Q9BYX4 1025 aaKnown RBP18.11■□□□□ 0.49
APBA3-205ENST00000590064 FOXP1Q9H334 677 aaPredicted RBP18.11■□□□□ 0.49
APBA3-205ENST00000590064 HDAC6Q9UBN7 1215 aa18.11■□□□□ 0.49
APBA3-205ENST00000590064 FMNL1O95466 1100 aaPredicted RBP18.11■□□□□ 0.49
APBA3-205ENST00000590064 PRPF4BQ13523 1007 aaKnown RBP18.11■□□□□ 0.49
APBA3-205ENST00000590064 FAM207AQ9NSI2 230 aaPredicted RBP18.11■□□□□ 0.49
APBA3-205ENST00000590064 STX8Q9UNK0 236 aa18.11■□□□□ 0.49
APBA3-205ENST00000590064 RFX7Q2KHR2 1363 aa18.11■□□□□ 0.49
APBA3-205ENST00000590064 MAGEA1P43355 309 aa18.11■□□□□ 0.49
APBA3-205ENST00000590064 C2orf54Q08AI8 447 aa18.11■□□□□ 0.49
APBA3-205ENST00000590064 CAVIN4Q5BKX8 364 aa18.11■□□□□ 0.49
APBA3-205ENST00000590064 PLCD4Q9BRC7 762 aa18.11■□□□□ 0.49
APBA3-205ENST00000590064 TSGA10Q9BZW7 698 aa18.11■□□□□ 0.49
APBA3-205ENST00000590064 MAGEB6P1A0A0J9YX57 407 aa18.1■□□□□ 0.49
APBA3-205ENST00000590064 BICDL2A1A5D9 508 aa18.1■□□□□ 0.49
APBA3-205ENST00000590064 ZPR1O75312 459 aa18.1■□□□□ 0.49
APBA3-205ENST00000590064 IFNAR1P17181 557 aa18.1■□□□□ 0.49
APBA3-205ENST00000590064 SRPRBQ9Y5M8 271 aaKnown RBP18.1■□□□□ 0.49
APBA3-205ENST00000590064 PHKA1P46020 1223 aa18.1■□□□□ 0.49
APBA3-205ENST00000590064 GUCY2FP51841 1108 aa18.1■□□□□ 0.49
APBA3-205ENST00000590064 CYP27A1Q02318 531 aa18.1■□□□□ 0.49
APBA3-205ENST00000590064 TADA2BQ86TJ2 420 aa18.1■□□□□ 0.49
APBA3-205ENST00000590064 RIN2Q8WYP3 895 aaPredicted RBP18.1■□□□□ 0.49
APBA3-205ENST00000590064 PNKPQ96T60 521 aa18.1■□□□□ 0.49
APBA3-205ENST00000590064 C2CD5Q86YS7 1000 aa18.1■□□□□ 0.49
APBA3-205ENST00000590064 NBPF14Q5TI25 921 aa18.09■□□□□ 0.49
APBA3-205ENST00000590064 PAXIP1Q6ZW49 1069 aaPredicted RBP18.09■□□□□ 0.49
APBA3-205ENST00000590064 DYDC1Q8WWB3 177 aa18.09■□□□□ 0.49
APBA3-205ENST00000590064 IFT172Q9UG01 1749 aa18.09■□□□□ 0.49
APBA3-205ENST00000590064 GBP2P32456 591 aaPredicted RBP18.09■□□□□ 0.49
APBA3-205ENST00000590064 SF3A3Q12874 501 aaKnown RBP eCLIP18.09■□□□□ 0.496e-7■■■■■ 26.8
APBA3-205ENST00000590064 PAGE5Q96GU1 130 aa18.09■□□□□ 0.49
APBA3-205ENST00000590064 LCMT1Q9UIC8 334 aa18.09■□□□□ 0.49
APBA3-205ENST00000590064 CALML3P27482 149 aa18.09■□□□□ 0.49
APBA3-205ENST00000590064 ATP2B2Q01814 1243 aa18.09■□□□□ 0.49
APBA3-205ENST00000590064 SCARF1Q14162 830 aa18.09■□□□□ 0.49
APBA3-205ENST00000590064 ARFGAP2Q8N6H7 521 aa18.09■□□□□ 0.49
APBA3-205ENST00000590064 NOA1Q8NC60 698 aaKnown RBP18.09■□□□□ 0.49
APBA3-205ENST00000590064 ADD2P35612 726 aa18.09■□□□□ 0.49
APBA3-205ENST00000590064 USP49Q70CQ1 688 aa18.09■□□□□ 0.49
APBA3-205ENST00000590064 ABHD10Q9NUJ1 306 aa18.09■□□□□ 0.49
APBA3-205ENST00000590064 TNKSO95271 1327 aa18.08■□□□□ 0.49
APBA3-205ENST00000590064 UBN2Q6ZU65 1347 aa18.08■□□□□ 0.49
APBA3-205ENST00000590064 NUTM2BA6NNL0 878 aaPredicted RBP18.08■□□□□ 0.49
APBA3-205ENST00000590064 NUTM2EB1AL46 878 aaPredicted RBP18.08■□□□□ 0.49
APBA3-205ENST00000590064 CPLX4Q7Z7G2 160 aa18.08■□□□□ 0.49
APBA3-205ENST00000590064 CALM1P0DP23 149 aa18.08■□□□□ 0.48
APBA3-205ENST00000590064 CALM2P0DP24 149 aa18.08■□□□□ 0.48
APBA3-205ENST00000590064 CALM3P0DP25 149 aa18.08■□□□□ 0.48
APBA3-205ENST00000590064 CXCR5P32302 372 aa18.08■□□□□ 0.48
APBA3-205ENST00000590064 GGCXP38435 758 aa18.08■□□□□ 0.48
APBA3-205ENST00000590064 SPATA5Q8NB90 893 aa18.08■□□□□ 0.48
APBA3-205ENST00000590064 PARP1P09874 1014 aaKnown RBP18.08■□□□□ 0.48
APBA3-205ENST00000590064 FXR1P51114 621 aaKnown RBP eCLIP18.08■□□□□ 0.48
APBA3-205ENST00000590064 BICDL1Q6ZP65 573 aa18.08■□□□□ 0.48
APBA3-205ENST00000590064 OXER1Q8TDS5 423 aa18.08■□□□□ 0.48
APBA3-205ENST00000590064 PPANQ9NQ55 473 aaKnown RBP18.08■□□□□ 0.48
APBA3-205ENST00000590064 SEC63Q9UGP8 760 aaKnown RBP18.08■□□□□ 0.48
APBA3-205ENST00000590064 B4DLN1 442 aa18.07■□□□□ 0.48
APBA3-205ENST00000590064 RPN1P04843 607 aaKnown RBP18.07■□□□□ 0.48
APBA3-205ENST00000590064 ANTXR2P58335 489 aa18.07■□□□□ 0.48
APBA3-205ENST00000590064 GRIN1Q05586 938 aa18.07■□□□□ 0.48
APBA3-205ENST00000590064 PLEKHG1Q9ULL1 1385 aa18.07■□□□□ 0.48
APBA3-205ENST00000590064 H7C1D1 291 aa18.07■□□□□ 0.48
APBA3-205ENST00000590064 GTPBP6O43824 516 aaPredicted RBP18.07■□□□□ 0.48
APBA3-205ENST00000590064 PUM3Q15397 648 aaKnown RBP18.07■□□□□ 0.48
APBA3-205ENST00000590064 BEND6Q5SZJ8 279 aaPredicted RBP18.07■□□□□ 0.48
APBA3-205ENST00000590064 TCERG1LQ5VWI1 586 aa18.07■□□□□ 0.48
APBA3-205ENST00000590064 KLHL7Q8IXQ5 586 aa18.07■□□□□ 0.48
APBA3-205ENST00000590064 IFT20Q8IY31 132 aa18.07■□□□□ 0.48
APBA3-205ENST00000590064 SDR42E1Q8WUS8 393 aa18.07■□□□□ 0.48
APBA3-205ENST00000590064 NUP58Q9BVL2 599 aa18.07■□□□□ 0.48
APBA3-205ENST00000590064 UBA5Q9GZZ9 404 aa18.07■□□□□ 0.48
APBA3-205ENST00000590064 HPS5Q9UPZ3 1129 aa18.07■□□□□ 0.48
APBA3-205ENST00000590064 E7EVH7 732 aa18.07■□□□□ 0.48
APBA3-205ENST00000590064 CIAO1O76071 339 aa18.07■□□□□ 0.48
APBA3-205ENST00000590064 EZRP15311 586 aaKnown RBP18.07■□□□□ 0.48
APBA3-205ENST00000590064 SLC7A5Q01650 507 aa18.07■□□□□ 0.48
APBA3-205ENST00000590064 TCIRG1Q13488 830 aa18.07■□□□□ 0.48
APBA3-205ENST00000590064 TRIM58Q8NG06 486 aa18.07■□□□□ 0.48
APBA3-205ENST00000590064 SPAG5Q96R06 1193 aa18.07■□□□□ 0.48
APBA3-205ENST00000590064 SELENOOQ9BVL4 669 aa18.07■□□□□ 0.48
APBA3-205ENST00000590064 PSD3Q9NYI0 1048 aa18.07■□□□□ 0.48
APBA3-205ENST00000590064 TFRCP02786 760 aaKnown RBP18.06■□□□□ 0.48
APBA3-205ENST00000590064 DNM2P50570 870 aa18.06■□□□□ 0.48
APBA3-205ENST00000590064 ATG9AQ7Z3C6 839 aa18.06■□□□□ 0.48
APBA3-205ENST00000590064 CEMIPQ8WUJ3 1361 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms