RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 SIAH1Q8IUQ4 282 aa26.42■■□□□ 1.82
R3HDM4-205ENST00000589445 MB21D2Q8IYB1 491 aaPredicted RBP26.42■■□□□ 1.82
R3HDM4-205ENST00000589445 SPICE1Q8N0Z3 855 aa26.42■■□□□ 1.82
R3HDM4-205ENST00000589445 FAM43AQ8N2R8 423 aa26.42■■□□□ 1.82
R3HDM4-205ENST00000589445 PROCA1Q8NCQ7 364 aaPredicted RBP26.42■■□□□ 1.82
R3HDM4-205ENST00000589445 BEGAINQ9BUH8 593 aa26.42■■□□□ 1.82
R3HDM4-205ENST00000589445 ISY1Q9ULR0 285 aaKnown RBP26.42■■□□□ 1.82
R3HDM4-205ENST00000589445 MTMR7Q9Y216 660 aa26.42■■□□□ 1.82
R3HDM4-205ENST00000589445 TMX2Q9Y320 296 aa26.42■■□□□ 1.82
R3HDM4-205ENST00000589445 SNX14Q9Y5W7 946 aa26.42■■□□□ 1.82
R3HDM4-205ENST00000589445 PARP14Q460N5 1801 aa26.42■■□□□ 1.82
R3HDM4-205ENST00000589445 TESPA1A2RU30 521 aaPredicted RBP26.41■■□□□ 1.82
R3HDM4-205ENST00000589445 MOGSQ13724 837 aa26.41■■□□□ 1.82
R3HDM4-205ENST00000589445 SH3D19Q5HYK7 790 aa26.41■■□□□ 1.82
R3HDM4-205ENST00000589445 OTUD7BQ6GQQ9 843 aa26.41■■□□□ 1.82
R3HDM4-205ENST00000589445 JAKMIP1Q96N16 626 aaKnown RBP26.41■■□□□ 1.82
R3HDM4-205ENST00000589445 ZSCAN10Q96SZ4 725 aaPredicted RBP26.41■■□□□ 1.82
R3HDM4-205ENST00000589445 PTPN18Q99952 460 aa26.41■■□□□ 1.82
R3HDM4-205ENST00000589445 EMILIN3Q9NT22 766 aa26.41■■□□□ 1.82
R3HDM4-205ENST00000589445 AGTPBP1Q9UPW5 1226 aa26.41■■□□□ 1.82
R3HDM4-205ENST00000589445 VCAM1P19320 739 aa26.4■■□□□ 1.82
R3HDM4-205ENST00000589445 TM4SF4P48230 202 aa26.4■■□□□ 1.82
R3HDM4-205ENST00000589445 SART3Q15020 963 aaKnown RBP26.4■■□□□ 1.82
R3HDM4-205ENST00000589445 CHMP4CQ96CF2 233 aa26.4■■□□□ 1.82
R3HDM4-205ENST00000589445 VCPKMTQ9H867 229 aa26.4■■□□□ 1.82
R3HDM4-205ENST00000589445 TCP11L1Q9NUJ3 509 aa26.4■■□□□ 1.82
R3HDM4-205ENST00000589445 ERICH2A1L162 156 aa26.39■■□□□ 1.82
R3HDM4-205ENST00000589445 PDHXO00330 501 aa26.39■■□□□ 1.82
R3HDM4-205ENST00000589445 PRC1O43663 620 aa26.39■■□□□ 1.82
R3HDM4-205ENST00000589445 ADCK5Q3MIX3 580 aa26.39■■□□□ 1.82
R3HDM4-205ENST00000589445 ANKRD23Q86SG2 305 aa26.39■■□□□ 1.82
R3HDM4-205ENST00000589445 ENAHQ8N8S7 591 aaPredicted RBP26.39■■□□□ 1.82
R3HDM4-205ENST00000589445 NEK1Q96PY6 1258 aa26.39■■□□□ 1.82
R3HDM4-205ENST00000589445 TANGO6Q9C0B7 1094 aa26.39■■□□□ 1.82
R3HDM4-205ENST00000589445 IFIT3O14879 490 aaKnown RBP26.38■■□□□ 1.81
R3HDM4-205ENST00000589445 MCM5P33992 734 aa26.38■■□□□ 1.81
R3HDM4-205ENST00000589445 TAF1CQ15572 869 aaPredicted RBP26.38■■□□□ 1.81
R3HDM4-205ENST00000589445 CCDC178Q5BJE1 867 aa26.38■■□□□ 1.81
R3HDM4-205ENST00000589445 C12orf42Q96LP6 360 aa26.38■■□□□ 1.81
R3HDM4-205ENST00000589445 NDUFB10O96000 172 aa26.37■■□□□ 1.81
R3HDM4-205ENST00000589445 TOP1P11387 765 aaKnown RBP26.37■■□□□ 1.81
R3HDM4-205ENST00000589445 ANTXR2P58335 489 aa26.37■■□□□ 1.81
R3HDM4-205ENST00000589445 PABPC4Q13310 644 aaKnown RBP eCLIP26.37■■□□□ 1.81
R3HDM4-205ENST00000589445 TMEM67Q5HYA8 995 aa26.37■■□□□ 1.81
R3HDM4-205ENST00000589445 KIAA1755Q5JYT7 1200 aa26.37■■□□□ 1.81
R3HDM4-205ENST00000589445 IFIT1BQ5T764 474 aaKnown RBP26.37■■□□□ 1.81
R3HDM4-205ENST00000589445 GPAT2Q6NUI2 795 aa26.37■■□□□ 1.81
R3HDM4-205ENST00000589445 LPAR1Q92633 364 aa26.37■■□□□ 1.81
R3HDM4-205ENST00000589445 KCNB2Q92953 911 aa26.37■■□□□ 1.81
R3HDM4-205ENST00000589445 TMEM47Q9BQJ4 181 aa26.37■■□□□ 1.81
R3HDM4-205ENST00000589445 RPAP3Q9H6T3 665 aaPredicted RBP26.37■■□□□ 1.81
R3HDM4-205ENST00000589445 TRPA1O75762 1119 aa26.36■■□□□ 1.81
R3HDM4-205ENST00000589445 IRX3P78415 501 aaPredicted RBP26.36■■□□□ 1.81
R3HDM4-205ENST00000589445 COL9A3Q14050 684 aaPredicted RBP26.36■■□□□ 1.81
R3HDM4-205ENST00000589445 TSGA10IPQ3SY00 556 aa26.36■■□□□ 1.81
R3HDM4-205ENST00000589445 SAMD1Q6SPF0 538 aaPredicted RBP26.36■■□□□ 1.81
R3HDM4-205ENST00000589445 PARK7Q99497 189 aaKnown RBP26.36■■□□□ 1.81
R3HDM4-205ENST00000589445 NUP88Q99567 741 aaPredicted RBP26.36■■□□□ 1.81
R3HDM4-205ENST00000589445 KAT14Q9H8E8 782 aa26.36■■□□□ 1.81
R3HDM4-205ENST00000589445 UPF2Q9HAU5 1272 aaKnown RBP26.36■■□□□ 1.81
R3HDM4-205ENST00000589445 PNMA3Q9UL41 463 aa26.36■■□□□ 1.81
R3HDM4-205ENST00000589445 A0A0G2JMZ2 1700 aa26.35■■□□□ 1.81
R3HDM4-205ENST00000589445 ALDH1A1P00352 501 aa26.35■■□□□ 1.81
R3HDM4-205ENST00000589445 CASTP20810 708 aaKnown RBP26.35■■□□□ 1.81
R3HDM4-205ENST00000589445 WTAPQ15007 396 aa26.35■■□□□ 1.81
R3HDM4-205ENST00000589445 RCSD1Q6JBY9 416 aa26.35■■□□□ 1.81
R3HDM4-205ENST00000589445 RASGRP2Q7LDG7 609 aa26.35■■□□□ 1.81
R3HDM4-205ENST00000589445 TCEANC2Q96MN5 208 aa26.35■■□□□ 1.81
R3HDM4-205ENST00000589445 LRRC2Q9BYS8 371 aa26.35■■□□□ 1.81
R3HDM4-205ENST00000589445 RNF186Q9NXI6 227 aa26.35■■□□□ 1.81
R3HDM4-205ENST00000589445 SYNPO2Q9UMS6 1093 aa26.35■■□□□ 1.81
R3HDM4-205ENST00000589445 F5H6K3 240 aa26.34■■□□□ 1.81
R3HDM4-205ENST00000589445 WDR46O15213 610 aaKnown RBP26.34■■□□□ 1.81
R3HDM4-205ENST00000589445 CPA1P15085 419 aa26.34■■□□□ 1.81
R3HDM4-205ENST00000589445 KLRC3Q07444 240 aa26.34■■□□□ 1.81
R3HDM4-205ENST00000589445 CCDC96Q2M329 555 aa26.34■■□□□ 1.81
R3HDM4-205ENST00000589445 FAM83BQ5T0W9 1011 aa26.34■■□□□ 1.81
R3HDM4-205ENST00000589445 SLFN13Q68D06 897 aa26.34■■□□□ 1.81
R3HDM4-205ENST00000589445 BLOC1S2Q6QNY1 142 aa26.34■■□□□ 1.81
R3HDM4-205ENST00000589445 GMCL1P1Q8NEA9 526 aa26.34■■□□□ 1.81
R3HDM4-205ENST00000589445 SMCR8Q8TEV9 937 aaPredicted RBP26.34■■□□□ 1.81
R3HDM4-205ENST00000589445 MKL1Q969V6 931 aa26.34■■□□□ 1.81
R3HDM4-205ENST00000589445 ZCCHC17Q9NP64 241 aaKnown RBP26.34■■□□□ 1.81
R3HDM4-205ENST00000589445 TSKSQ9UJT2 592 aa26.34■■□□□ 1.81
R3HDM4-205ENST00000589445 COL11A1P12107 1806 aaPredicted RBP26.33■■□□□ 1.81
R3HDM4-205ENST00000589445 HMGB1P09429 215 aaKnown RBP26.33■■□□□ 1.81
R3HDM4-205ENST00000589445 CYP2C8P10632 490 aa26.33■■□□□ 1.81
R3HDM4-205ENST00000589445 OSBPP22059 807 aa26.33■■□□□ 1.81
R3HDM4-205ENST00000589445 NOVP48745 357 aa26.33■■□□□ 1.81
R3HDM4-205ENST00000589445 CRHR2Q13324 411 aa26.33■■□□□ 1.81
R3HDM4-205ENST00000589445 DGKHQ86XP1 1220 aa26.33■■□□□ 1.81
R3HDM4-205ENST00000589445 PNMA1Q8ND90 353 aa26.33■■□□□ 1.81
R3HDM4-205ENST00000589445 TTC14Q96N46 770 aa26.33■■□□□ 1.81
R3HDM4-205ENST00000589445 RLFQ13129 1914 aa26.32■■□□□ 1.8
R3HDM4-205ENST00000589445 USP17L15C9J2P7 530 aa26.32■■□□□ 1.8
R3HDM4-205ENST00000589445 USP17L13C9JLJ4 530 aa26.32■■□□□ 1.8
R3HDM4-205ENST00000589445 USP17L11C9JVI0 530 aa26.32■■□□□ 1.8
R3HDM4-205ENST00000589445 USP17L18D6R9N7 530 aa26.32■■□□□ 1.8
R3HDM4-205ENST00000589445 USP17L22D6RA61 530 aa26.32■■□□□ 1.8
R3HDM4-205ENST00000589445 USP17L17D6RBQ6 530 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms