RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 WWC3Q9ULE0 1092 aa5.95□□□□□ -1.46
SMAD4-207ENST00000589076 TEX51A0A1B0GUA7 166 aa5.94□□□□□ -1.46
SMAD4-207ENST00000589076 ZGLP1P0C6A0 271 aa5.94□□□□□ -1.46
SMAD4-207ENST00000589076 TNNI2P48788 182 aa5.94□□□□□ -1.46
SMAD4-207ENST00000589076 RPL6Q02878 288 aaKnown RBP5.94□□□□□ -1.46
SMAD4-207ENST00000589076 AGMOQ6ZNB7 445 aa5.94□□□□□ -1.46
SMAD4-207ENST00000589076 ANKS4BQ8N8V4 417 aa5.94□□□□□ -1.46
SMAD4-207ENST00000589076 INTS4Q96HW7 963 aaKnown RBP5.94□□□□□ -1.46
SMAD4-207ENST00000589076 Q96M66 194 aa5.94□□□□□ -1.46
SMAD4-207ENST00000589076 SETDB2Q96T68 719 aa5.94□□□□□ -1.46
SMAD4-207ENST00000589076 MCOLN1Q9GZU1 580 aa5.94□□□□□ -1.46
SMAD4-207ENST00000589076 GPR160Q9UJ42 338 aa5.94□□□□□ -1.46
SMAD4-207ENST00000589076 YBX2Q9Y2T7 364 aaKnown RBP5.94□□□□□ -1.46
SMAD4-207ENST00000589076 BPNT1O95861 308 aa5.93□□□□□ -1.46
SMAD4-207ENST00000589076 GNA15P30679 374 aa5.93□□□□□ -1.46
SMAD4-207ENST00000589076 CLEC16AQ2KHT3 1053 aa5.93□□□□□ -1.46
SMAD4-207ENST00000589076 DNAJB8Q8NHS0 232 aa5.93□□□□□ -1.46
SMAD4-207ENST00000589076 CYB5D2Q8WUJ1 264 aa5.93□□□□□ -1.46
SMAD4-207ENST00000589076 KRTAP4-5Q9BYR2 181 aa5.93□□□□□ -1.46
SMAD4-207ENST00000589076 ASCC2Q9H1I8 757 aaPredicted RBP5.93□□□□□ -1.46
SMAD4-207ENST00000589076 PCDHB5Q9Y5E4 795 aa5.93□□□□□ -1.46
SMAD4-207ENST00000589076 WASH4PA8MWX3 477 aa5.92□□□□□ -1.46
SMAD4-207ENST00000589076 LIG3P49916 1009 aa5.92□□□□□ -1.46
SMAD4-207ENST00000589076 MAP3K11Q16584 847 aa5.92□□□□□ -1.46
SMAD4-207ENST00000589076 DTWD2Q8NBA8 298 aa5.92□□□□□ -1.46
SMAD4-207ENST00000589076 FAM13CQ8NE31 585 aa5.92□□□□□ -1.46
SMAD4-207ENST00000589076 PPP1R13LQ8WUF5 828 aa5.92□□□□□ -1.46
SMAD4-207ENST00000589076 RNF141Q8WVD5 230 aa5.92□□□□□ -1.46
SMAD4-207ENST00000589076 ZNF552Q9H707 407 aaPredicted RBP5.92□□□□□ -1.46
SMAD4-207ENST00000589076 KCTD3Q9Y597 815 aa5.92□□□□□ -1.46
SMAD4-207ENST00000589076 PCDHA11Q9Y5I1 949 aa5.92□□□□□ -1.46
SMAD4-207ENST00000589076 SASH1O94885 1247 aa5.91□□□□□ -1.46
SMAD4-207ENST00000589076 SYN1P17600 705 aa5.91□□□□□ -1.46
SMAD4-207ENST00000589076 OLFML2BQ68BL8 750 aa5.91□□□□□ -1.46
SMAD4-207ENST00000589076 DNAJC14Q6Y2X3 702 aaPredicted RBP5.91□□□□□ -1.46
SMAD4-207ENST00000589076 JARID2Q92833 1246 aaPredicted RBP5.91□□□□□ -1.46
SMAD4-207ENST00000589076 OR14I1A6ND48 311 aa5.9□□□□□ -1.46
SMAD4-207ENST00000589076 PLCG1P19174 1290 aa5.9□□□□□ -1.46
SMAD4-207ENST00000589076 NFIXQ14938 502 aa5.9□□□□□ -1.46
SMAD4-207ENST00000589076 DBX2Q6ZNG2 339 aa5.9□□□□□ -1.46
SMAD4-207ENST00000589076 ACSF2Q96CM8 615 aaPredicted RBP5.9□□□□□ -1.46
SMAD4-207ENST00000589076 MYOCOSA0A1B0GUC4 107 aa5.89□□□□□ -1.47
SMAD4-207ENST00000589076 SSU72P8A0A1W2PR75 194 aa5.89□□□□□ -1.47
SMAD4-207ENST00000589076 FOXD2O60548 495 aaPredicted RBP5.89□□□□□ -1.47
SMAD4-207ENST00000589076 PRPF40AO75400 957 aaKnown RBP5.89□□□□□ -1.47
SMAD4-207ENST00000589076 P4HBP07237 508 aaKnown RBP5.89□□□□□ -1.47
SMAD4-207ENST00000589076 SLC14A2Q15849 920 aa5.89□□□□□ -1.47
SMAD4-207ENST00000589076 NPM2Q86SE8 214 aaKnown RBP5.89□□□□□ -1.47
SMAD4-207ENST00000589076 C20orf173Q96LM9 149 aa5.89□□□□□ -1.47
SMAD4-207ENST00000589076 ASPNQ9BXN1 380 aa5.89□□□□□ -1.47
SMAD4-207ENST00000589076 SIRT5Q9NXA8 310 aa5.89□□□□□ -1.47
SMAD4-207ENST00000589076 IRAK3Q9Y616 596 aa5.89□□□□□ -1.47
SMAD4-207ENST00000589076 AK5Q9Y6K8 562 aa5.89□□□□□ -1.47
SMAD4-207ENST00000589076 ANKRD33BA6NCL7 494 aa5.88□□□□□ -1.47
SMAD4-207ENST00000589076 TIGD5Q53EQ6 642 aa5.88□□□□□ -1.47
SMAD4-207ENST00000589076 ADGRF1Q5T601 910 aa5.88□□□□□ -1.47
SMAD4-207ENST00000589076 CCDC84Q86UT8 332 aaPredicted RBP5.88□□□□□ -1.47
SMAD4-207ENST00000589076 SIGLEC10Q96LC7 697 aa5.88□□□□□ -1.47
SMAD4-207ENST00000589076 SP110Q9HB58 689 aa5.88□□□□□ -1.47
SMAD4-207ENST00000589076 ZMYM5Q9UJ78 669 aa5.88□□□□□ -1.47
SMAD4-207ENST00000589076 TFE3P19532 575 aaPredicted RBP5.87□□□□□ -1.47
SMAD4-207ENST00000589076 MLECQ14165 292 aa5.87□□□□□ -1.47
SMAD4-207ENST00000589076 RNF111Q6ZNA4 994 aa5.87□□□□□ -1.47
SMAD4-207ENST00000589076 MARCH10Q8NA82 808 aaPredicted RBP5.87□□□□□ -1.47
SMAD4-207ENST00000589076 ENOX1Q8TC92 643 aaKnown RBP5.87□□□□□ -1.47
SMAD4-207ENST00000589076 BORCS6Q96GS4 357 aa5.87□□□□□ -1.47
SMAD4-207ENST00000589076 CCDC74BQ96LY2 380 aa5.87□□□□□ -1.47
SMAD4-207ENST00000589076 KCNC2Q96PR1 638 aa5.87□□□□□ -1.47
SMAD4-207ENST00000589076 RBM47A0AV96 593 aaKnown RBP5.86□□□□□ -1.47
SMAD4-207ENST00000589076 HRKO00198 91 aa5.86□□□□□ -1.47
SMAD4-207ENST00000589076 RPL10P27635 214 aaKnown RBP5.86□□□□□ -1.47
SMAD4-207ENST00000589076 SRSF3P84103 164 aaKnown RBP5.86□□□□□ -1.47
SMAD4-207ENST00000589076 TMEM201Q5SNT2 666 aa5.86□□□□□ -1.47
SMAD4-207ENST00000589076 SLFN12Q8IYM2 578 aa5.86□□□□□ -1.47
SMAD4-207ENST00000589076 PHACTR4Q8IZ21 702 aa5.86□□□□□ -1.47
SMAD4-207ENST00000589076 KREMEN1Q96MU8 473 aa5.86□□□□□ -1.47
SMAD4-207ENST00000589076 NOC4LQ9BVI4 516 aaKnown RBP5.86□□□□□ -1.47
SMAD4-207ENST00000589076 SGPP1Q9BX95 441 aa5.86□□□□□ -1.47
SMAD4-207ENST00000589076 UPK3BL1B0FP48 263 aa5.85□□□□□ -1.47
SMAD4-207ENST00000589076 UPK3BL2E5RIL1 263 aa5.85□□□□□ -1.47
SMAD4-207ENST00000589076 ABLIM1O14639 778 aa5.85□□□□□ -1.47
SMAD4-207ENST00000589076 PSPNO60542 156 aa5.85□□□□□ -1.47
SMAD4-207ENST00000589076 GBP1P32455 592 aa5.85□□□□□ -1.47
SMAD4-207ENST00000589076 TEKQ02763 1124 aa5.85□□□□□ -1.47
SMAD4-207ENST00000589076 SIRT2Q8IXJ6 389 aa5.85□□□□□ -1.47
SMAD4-207ENST00000589076 CRTAC1Q9NQ79 661 aa5.85□□□□□ -1.47
SMAD4-207ENST00000589076 RTEL1Q9NZ71 1219 aa5.85□□□□□ -1.47
SMAD4-207ENST00000589076 KLHL3Q9UH77 587 aa5.85□□□□□ -1.47
SMAD4-207ENST00000589076 CORINQ9Y5Q5 1042 aa5.85□□□□□ -1.47
SMAD4-207ENST00000589076 A0A0G2JLL6 359 aaPredicted RBP5.84□□□□□ -1.47
SMAD4-207ENST00000589076 LRRN2O75325 713 aa5.84□□□□□ -1.47
SMAD4-207ENST00000589076 PI3P19957 117 aa5.84□□□□□ -1.47
SMAD4-207ENST00000589076 KIR2DL1P43626 348 aaPredicted RBP5.84□□□□□ -1.47
SMAD4-207ENST00000589076 KIR2DL2P43627 348 aaPredicted RBP5.84□□□□□ -1.47
SMAD4-207ENST00000589076 AFF3P51826 1226 aaKnown RBP5.84□□□□□ -1.47
SMAD4-207ENST00000589076 PCBP3P57721 371 aaKnown RBP5.84□□□□□ -1.47
SMAD4-207ENST00000589076 RNF4P78317 190 aa5.84□□□□□ -1.47
SMAD4-207ENST00000589076 TAF1CQ15572 869 aaPredicted RBP5.84□□□□□ -1.47
SMAD4-207ENST00000589076 WAPLQ7Z5K2 1190 aa5.84□□□□□ -1.47
SMAD4-207ENST00000589076 CXorf38Q8TB03 319 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms