RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 FBXL16Q8N461 479 aa23.5■■□□□ 1.35
DNMT1-216ENST00000588952 FEZ1Q99689 392 aa23.5■■□□□ 1.35
DNMT1-216ENST00000588952 LARP6Q9BRS8 491 aaKnown RBP23.5■■□□□ 1.35
DNMT1-216ENST00000588952 KIAA1683Q9H0B3 1180 aa23.5■■□□□ 1.35
DNMT1-216ENST00000588952 USP17L10C9JJH3 530 aa23.49■■□□□ 1.35
DNMT1-216ENST00000588952 LIFRP42702 1097 aa23.49■■□□□ 1.35
DNMT1-216ENST00000588952 AK2P54819 239 aa23.49■■□□□ 1.35
DNMT1-216ENST00000588952 PPP4R3BQ5MIZ7 849 aa23.49■■□□□ 1.35
DNMT1-216ENST00000588952 BRF1Q92994 677 aa23.49■■□□□ 1.35
DNMT1-216ENST00000588952 CHMP4CQ96CF2 233 aa23.49■■□□□ 1.35
DNMT1-216ENST00000588952 EMILIN3Q9NT22 766 aa23.49■■□□□ 1.35
DNMT1-216ENST00000588952 BRPF3Q9ULD4 1205 aa23.49■■□□□ 1.35
DNMT1-216ENST00000588952 A0A0G2JLL6 359 aaPredicted RBP23.48■■□□□ 1.35
DNMT1-216ENST00000588952 CXCL11O14625 94 aa23.48■■□□□ 1.35
DNMT1-216ENST00000588952 HMGCS2P54868 508 aa23.48■■□□□ 1.35
DNMT1-216ENST00000588952 APOBRQ0VD83 1088 aa23.48■■□□□ 1.35
DNMT1-216ENST00000588952 MOGSQ13724 837 aa23.48■■□□□ 1.35
DNMT1-216ENST00000588952 PRRT2Q7Z6L0 340 aaPredicted RBP23.48■■□□□ 1.35
DNMT1-216ENST00000588952 SGMS1Q86VZ5 419 aa23.48■■□□□ 1.35
DNMT1-216ENST00000588952 PNMA1Q8ND90 353 aa23.48■■□□□ 1.35
DNMT1-216ENST00000588952 MS4A4AQ96JQ5 239 aa23.48■■□□□ 1.35
DNMT1-216ENST00000588952 ALDH8A1Q9H2A2 487 aaPredicted RBP23.48■■□□□ 1.35
DNMT1-216ENST00000588952 VCPKMTQ9H867 229 aa23.48■■□□□ 1.35
DNMT1-216ENST00000588952 KAT14Q9H8E8 782 aa23.48■■□□□ 1.35
DNMT1-216ENST00000588952 LOC285556D6RIA3 1793 aa23.47■■□□□ 1.35
DNMT1-216ENST00000588952 CD2BP2O95400 341 aaKnown RBP23.47■■□□□ 1.35
DNMT1-216ENST00000588952 NDUFB10O96000 172 aa23.47■■□□□ 1.35
DNMT1-216ENST00000588952 ZBTB48P10074 688 aaPredicted RBP23.47■■□□□ 1.35
DNMT1-216ENST00000588952 FGD1P98174 961 aa23.47■■□□□ 1.35
DNMT1-216ENST00000588952 DEFB115Q30KQ5 88 aa23.47■■□□□ 1.35
DNMT1-216ENST00000588952 SH3D19Q5HYK7 790 aa23.47■■□□□ 1.35
DNMT1-216ENST00000588952 PAXIP1Q6ZW49 1069 aaPredicted RBP23.47■■□□□ 1.35
DNMT1-216ENST00000588952 RAB11FIP4Q86YS3 637 aa23.47■■□□□ 1.35
DNMT1-216ENST00000588952 SPICE1Q8N0Z3 855 aa23.47■■□□□ 1.35
DNMT1-216ENST00000588952 ZIC5Q96T25 663 aa23.47■■□□□ 1.35
DNMT1-216ENST00000588952 MYL10Q9BUA6 226 aa23.47■■□□□ 1.35
DNMT1-216ENST00000588952 SH2D4AQ9H788 454 aa23.47■■□□□ 1.35
DNMT1-216ENST00000588952 MTMR7Q9Y216 660 aa23.47■■□□□ 1.35
DNMT1-216ENST00000588952 F5H6K3 240 aa23.46■■□□□ 1.35
DNMT1-216ENST00000588952 HSPA6P17066 643 aa23.46■■□□□ 1.35
DNMT1-216ENST00000588952 KLRC3Q07444 240 aa23.46■■□□□ 1.35
DNMT1-216ENST00000588952 USP17L2Q6R6M4 530 aa23.46■■□□□ 1.35
DNMT1-216ENST00000588952 NFXL1Q6ZNB6 911 aa23.46■■□□□ 1.35
DNMT1-216ENST00000588952 ZNF654Q8IZM8 581 aa23.46■■□□□ 1.35
DNMT1-216ENST00000588952 GMCL1P1Q8NEA9 526 aa23.46■■□□□ 1.35
DNMT1-216ENST00000588952 SYNPO2Q9UMS6 1093 aa23.46■■□□□ 1.35
DNMT1-216ENST00000588952 KLF18A0A0U1RQI7 1052 aa23.45■■□□□ 1.34
DNMT1-216ENST00000588952 CCDC69A6NI79 296 aa23.45■■□□□ 1.34
DNMT1-216ENST00000588952 C19orf81C9J6K1 198 aa23.45■■□□□ 1.34
DNMT1-216ENST00000588952 GRM1Q13255 1194 aa23.45■■□□□ 1.34
DNMT1-216ENST00000588952 SNAPC2Q13487 334 aa23.45■■□□□ 1.34
DNMT1-216ENST00000588952 SLFN13Q68D06 897 aa23.45■■□□□ 1.34
DNMT1-216ENST00000588952 NOL8Q76FK4 1167 aaKnown RBP23.45■■□□□ 1.34
DNMT1-216ENST00000588952 CCDC102AQ96A19 550 aa23.45■■□□□ 1.34
DNMT1-216ENST00000588952 CAPNS2Q96L46 248 aa23.45■■□□□ 1.34
DNMT1-216ENST00000588952 C12orf42Q96LP6 360 aa23.45■■□□□ 1.34
DNMT1-216ENST00000588952 NUP88Q99567 741 aaPredicted RBP23.45■■□□□ 1.34
DNMT1-216ENST00000588952 GOPCQ9HD26 462 aa23.45■■□□□ 1.34
DNMT1-216ENST00000588952 RAD21O60216 631 aa23.44■■□□□ 1.34
DNMT1-216ENST00000588952 PDHBP11177 359 aa23.44■■□□□ 1.34
DNMT1-216ENST00000588952 VCAM1P19320 739 aa23.44■■□□□ 1.34
DNMT1-216ENST00000588952 RXRAP19793 462 aa23.44■■□□□ 1.34
DNMT1-216ENST00000588952 USP14P54578 494 aa23.44■■□□□ 1.34
DNMT1-216ENST00000588952 TROAPQ12815 778 aa23.44■■□□□ 1.34
DNMT1-216ENST00000588952 APOA5Q6Q788 366 aa23.44■■□□□ 1.34
DNMT1-216ENST00000588952 TMTC2Q8N394 836 aa23.44■■□□□ 1.34
DNMT1-216ENST00000588952 BRI3BPQ8WY22 251 aa23.44■■□□□ 1.34
DNMT1-216ENST00000588952 AOC2O75106 756 aa23.43■■□□□ 1.34
DNMT1-216ENST00000588952 SNHG28P0DPA3 235 aa23.43■■□□□ 1.34
DNMT1-216ENST00000588952 GTF2A2P52657 109 aa23.43■■□□□ 1.34
DNMT1-216ENST00000588952 EVCP57679 992 aa23.43■■□□□ 1.34
DNMT1-216ENST00000588952 TREML2Q5T2D2 321 aa23.43■■□□□ 1.34
DNMT1-216ENST00000588952 GPAT2Q6NUI2 795 aa23.43■■□□□ 1.34
DNMT1-216ENST00000588952 GADL1Q6ZQY3 521 aa23.43■■□□□ 1.34
DNMT1-216ENST00000588952 TPCN1Q9ULQ1 816 aa23.43■■□□□ 1.34
DNMT1-216ENST00000588952 SLC12A7Q9Y666 1083 aa23.43■■□□□ 1.34
DNMT1-216ENST00000588952 CCL15-CCL14A0A0B4J2E2 113 aa23.42■■□□□ 1.34
DNMT1-216ENST00000588952 LARGE1O95461 756 aa23.42■■□□□ 1.34
DNMT1-216ENST00000588952 CCL15Q16663 113 aa23.42■■□□□ 1.34
DNMT1-216ENST00000588952 CATIPQ7Z7H3 387 aa23.42■■□□□ 1.34
DNMT1-216ENST00000588952 GMCL1Q96IK5 515 aa23.42■■□□□ 1.34
DNMT1-216ENST00000588952 TMOD4Q9NZQ9 345 aa23.42■■□□□ 1.34
DNMT1-216ENST00000588952 HPS5Q9UPZ3 1129 aa23.42■■□□□ 1.34
DNMT1-216ENST00000588952 FRMPD2Q68DX3 1309 aaPredicted RBP23.41■■□□□ 1.34
DNMT1-216ENST00000588952 GOLGA8BA8MQT2 603 aa23.41■■□□□ 1.34
DNMT1-216ENST00000588952 DDAH1O94760 285 aa23.41■■□□□ 1.34
DNMT1-216ENST00000588952 CETPP11597 493 aa23.41■■□□□ 1.34
DNMT1-216ENST00000588952 VEGFBP49765 207 aa23.41■■□□□ 1.34
DNMT1-216ENST00000588952 FAM83BQ5T0W9 1011 aa23.41■■□□□ 1.34
DNMT1-216ENST00000588952 MICU3Q86XE3 530 aa23.41■■□□□ 1.34
DNMT1-216ENST00000588952 CCDC144CPQ8IYA2 1237 aa23.41■■□□□ 1.34
DNMT1-216ENST00000588952 NUP133Q8WUM0 1156 aa23.41■■□□□ 1.34
DNMT1-216ENST00000588952 LPAR1Q92633 364 aa23.41■■□□□ 1.34
DNMT1-216ENST00000588952 PTPN18Q99952 460 aa23.41■■□□□ 1.34
DNMT1-216ENST00000588952 TESPA1A2RU30 521 aaPredicted RBP23.4■■□□□ 1.34
DNMT1-216ENST00000588952 PDIA3P30101 505 aaKnown RBP23.4■■□□□ 1.34
DNMT1-216ENST00000588952 GRM4Q14833 912 aa23.4■■□□□ 1.34
DNMT1-216ENST00000588952 ANKRD1Q15327 319 aa23.4■■□□□ 1.34
DNMT1-216ENST00000588952 KCTD1Q719H9 257 aa23.4■■□□□ 1.34
DNMT1-216ENST00000588952 PROCA1Q8NCQ7 364 aaPredicted RBP23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms