RNA–Protein interactions for RNA: ENST00000588913.5

DNMT1-215, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 1,775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-215ENST00000588913 FKTNO75072 461 aa20.74■□□□□ 0.91
DNMT1-215ENST00000588913 COL9A3Q14050 684 aaPredicted RBP20.74■□□□□ 0.91
DNMT1-215ENST00000588913 RRP12Q5JTH9 1297 aaKnown RBP20.74■□□□□ 0.91
DNMT1-215ENST00000588913 AKNAD1Q5T1N1 836 aa20.74■□□□□ 0.91
DNMT1-215ENST00000588913 STAG1Q8WVM7 1258 aa20.74■□□□□ 0.91
DNMT1-215ENST00000588913 RUFY2Q8WXA3 655 aa20.74■□□□□ 0.91
DNMT1-215ENST00000588913 KANSL2Q9H9L4 492 aa20.74■□□□□ 0.91
DNMT1-215ENST00000588913 MTMR4Q9NYA4 1195 aa20.74■□□□□ 0.91
DNMT1-215ENST00000588913 CENPFP49454 3210 aa20.74■□□□□ 0.91
DNMT1-215ENST00000588913 RANBP6O60518 1105 aaKnown RBP20.73■□□□□ 0.91
DNMT1-215ENST00000588913 HOXA7P31268 230 aaPredicted RBP20.73■□□□□ 0.91
DNMT1-215ENST00000588913 PARK7Q99497 189 aaKnown RBP20.73■□□□□ 0.91
DNMT1-215ENST00000588913 MGAMO43451 1857 aa20.73■□□□□ 0.91
DNMT1-215ENST00000588913 SLC3A2P08195 630 aaKnown RBP20.72■□□□□ 0.91
DNMT1-215ENST00000588913 CYP21A2P08686 494 aa20.72■□□□□ 0.91
DNMT1-215ENST00000588913 TSPY3P0CV98 308 aa20.72■□□□□ 0.91
DNMT1-215ENST00000588913 TSPY8P0CW00 308 aa20.72■□□□□ 0.91
DNMT1-215ENST00000588913 PTMSP20962 102 aa20.72■□□□□ 0.91
DNMT1-215ENST00000588913 RPAP3Q9H6T3 665 aaPredicted RBP20.72■□□□□ 0.91
DNMT1-215ENST00000588913 VCPKMTQ9H867 229 aa20.72■□□□□ 0.91
DNMT1-215ENST00000588913 TXNRD2Q9NNW7 524 aa20.72■□□□□ 0.91
DNMT1-215ENST00000588913 ZNF213O14771 459 aa20.72■□□□□ 0.91
DNMT1-215ENST00000588913 SP3Q02447 781 aa20.72■□□□□ 0.91
DNMT1-215ENST00000588913 STOX1Q6ZVD7 989 aa20.72■□□□□ 0.91
DNMT1-215ENST00000588913 HSCBQ8IWL3 235 aa20.72■□□□□ 0.91
DNMT1-215ENST00000588913 LRRC47Q8N1G4 583 aaKnown RBP20.72■□□□□ 0.91
DNMT1-215ENST00000588913 MAP4K1Q92918 833 aa20.72■□□□□ 0.91
DNMT1-215ENST00000588913 NUP88Q99567 741 aaPredicted RBP20.72■□□□□ 0.91
DNMT1-215ENST00000588913 NYAP2Q9P242 653 aa20.72■□□□□ 0.91
DNMT1-215ENST00000588913 CLIP2Q9UDT6 1046 aa20.72■□□□□ 0.91
DNMT1-215ENST00000588913 CDC45O75419 566 aa20.71■□□□□ 0.91
DNMT1-215ENST00000588913 SNX21Q969T3 373 aa20.71■□□□□ 0.91
DNMT1-215ENST00000588913 CHMP4CQ96CF2 233 aa20.71■□□□□ 0.91
DNMT1-215ENST00000588913 SLKQ9H2G2 1235 aaPredicted RBP20.71■□□□□ 0.91
DNMT1-215ENST00000588913 ARHGEF10LQ9HCE6 1279 aa20.71■□□□□ 0.91
DNMT1-215ENST00000588913 TOMM22Q9NS69 142 aa20.71■□□□□ 0.91
DNMT1-215ENST00000588913 ISY1Q9ULR0 285 aaKnown RBP20.71■□□□□ 0.91
DNMT1-215ENST00000588913 RBM8AQ9Y5S9 174 aaKnown RBP20.71■□□□□ 0.91
DNMT1-215ENST00000588913 A0A0G2JMZ2 1700 aa20.71■□□□□ 0.91
DNMT1-215ENST00000588913 TSPY2A6NKD2 308 aa20.7■□□□□ 0.9
DNMT1-215ENST00000588913 RBM25P49756 843 aaKnown RBP20.7■□□□□ 0.9
DNMT1-215ENST00000588913 USP14P54578 494 aa20.7■□□□□ 0.9
DNMT1-215ENST00000588913 CATSPERGQ6ZRH7 1159 aa20.7■□□□□ 0.9
DNMT1-215ENST00000588913 MFSD6Q6ZSS7 791 aa20.7■□□□□ 0.9
DNMT1-215ENST00000588913 ZNF287Q9HBT7 754 aa20.7■□□□□ 0.9
DNMT1-215ENST00000588913 BRPF3Q9ULD4 1205 aa20.7■□□□□ 0.9
DNMT1-215ENST00000588913 B4E1Z4 1266 aa20.69■□□□□ 0.9
DNMT1-215ENST00000588913 NOVP48745 357 aa20.69■□□□□ 0.9
DNMT1-215ENST00000588913 ANKRD13CQ8N6S4 541 aa20.69■□□□□ 0.9
DNMT1-215ENST00000588913 ZKSCAN3Q9BRR0 538 aa20.69■□□□□ 0.9
DNMT1-215ENST00000588913 COL11A1P12107 1806 aaPredicted RBP20.69■□□□□ 0.9
DNMT1-215ENST00000588913 CNMDO75829 334 aa20.69■□□□□ 0.9
DNMT1-215ENST00000588913 HERVK_113P62684 666 aa20.69■□□□□ 0.9
DNMT1-215ENST00000588913 IMMTQ16891 758 aaKnown RBP20.69■□□□□ 0.9
DNMT1-215ENST00000588913 RCSD1Q6JBY9 416 aa20.69■□□□□ 0.9
DNMT1-215ENST00000588913 MKL1Q969V6 931 aa20.69■□□□□ 0.9
DNMT1-215ENST00000588913 FBXO28Q9NVF7 368 aa20.69■□□□□ 0.9
DNMT1-215ENST00000588913 RBPJLQ9UBG7 517 aa20.69■□□□□ 0.9
DNMT1-215ENST00000588913 CIZ1Q9ULV3 898 aaPredicted RBP20.69■□□□□ 0.9
DNMT1-215ENST00000588913 DOCK3Q8IZD9 2030 aa20.69■□□□□ 0.9
DNMT1-215ENST00000588913 NDUFB10O96000 172 aa20.68■□□□□ 0.9
DNMT1-215ENST00000588913 LACTBP83111 547 aaPredicted RBP20.68■□□□□ 0.9
DNMT1-215ENST00000588913 SMCR8Q8TEV9 937 aaPredicted RBP20.68■□□□□ 0.9
DNMT1-215ENST00000588913 SPDYE16A6NNV3 312 aaPredicted RBP20.67■□□□□ 0.9
DNMT1-215ENST00000588913 DDX11L8A8MPP1 907 aa20.67■□□□□ 0.9
DNMT1-215ENST00000588913 USP17L15C9J2P7 530 aa20.67■□□□□ 0.9
DNMT1-215ENST00000588913 USP17L13C9JLJ4 530 aa20.67■□□□□ 0.9
DNMT1-215ENST00000588913 USP17L11C9JVI0 530 aa20.67■□□□□ 0.9
DNMT1-215ENST00000588913 USP17L18D6R9N7 530 aa20.67■□□□□ 0.9
DNMT1-215ENST00000588913 USP17L22D6RA61 530 aa20.67■□□□□ 0.9
DNMT1-215ENST00000588913 USP17L17D6RBQ6 530 aa20.67■□□□□ 0.9
DNMT1-215ENST00000588913 USP17L19D6RCP7 530 aa20.67■□□□□ 0.9
DNMT1-215ENST00000588913 USP17L20D6RJB6 530 aa20.67■□□□□ 0.9
DNMT1-215ENST00000588913 F5H6K3 240 aa20.67■□□□□ 0.9
DNMT1-215ENST00000588913 KDM4AO75164 1064 aa20.67■□□□□ 0.9
DNMT1-215ENST00000588913 OSBPP22059 807 aa20.67■□□□□ 0.9
DNMT1-215ENST00000588913 IRX3P78415 501 aaPredicted RBP20.67■□□□□ 0.9
DNMT1-215ENST00000588913 KLRC3Q07444 240 aa20.67■□□□□ 0.9
DNMT1-215ENST00000588913 USP17L24Q0WX57 530 aa20.67■□□□□ 0.9
DNMT1-215ENST00000588913 Q3C1V9 767 aa20.67■□□□□ 0.9
DNMT1-215ENST00000588913 FAM83BQ5T0W9 1011 aa20.67■□□□□ 0.9
DNMT1-215ENST00000588913 OTOP1Q7RTM1 612 aa20.67■□□□□ 0.9
DNMT1-215ENST00000588913 TRIM47Q96LD4 638 aa20.67■□□□□ 0.9
DNMT1-215ENST00000588913 MCOLN1Q9GZU1 580 aa20.67■□□□□ 0.9
DNMT1-215ENST00000588913 ANO2Q9NQ90 1003 aa20.67■□□□□ 0.9
DNMT1-215ENST00000588913 CTNNA3Q9UI47 895 aa20.67■□□□□ 0.9
DNMT1-215ENST00000588913 RAD21O60216 631 aa20.67■□□□□ 0.9
DNMT1-215ENST00000588913 TTLL1O95922 423 aa20.67■□□□□ 0.9
DNMT1-215ENST00000588913 MCM4P33991 863 aa20.67■□□□□ 0.9
DNMT1-215ENST00000588913 CYB5R4Q7L1T6 521 aa20.67■□□□□ 0.9
DNMT1-215ENST00000588913 PNMA3Q9UL41 463 aa20.67■□□□□ 0.9
DNMT1-215ENST00000588913 U3KPZ7 1027 aaPredicted RBP20.67■□□□□ 0.9
DNMT1-215ENST00000588913 PLXNB2O15031 1838 aa20.66■□□□□ 0.9
DNMT1-215ENST00000588913 PABPC4Q13310 644 aaKnown RBP eCLIP20.66■□□□□ 0.92e-9■■■■□ 20.9
DNMT1-215ENST00000588913 CTU1Q7Z7A3 348 aaKnown RBP20.66■□□□□ 0.9
DNMT1-215ENST00000588913 BTBD7Q9P203 1132 aa20.66■□□□□ 0.9
DNMT1-215ENST00000588913 ZSWIM5Q9P217 1185 aa20.66■□□□□ 0.9
DNMT1-215ENST00000588913 STX8Q9UNK0 236 aa20.66■□□□□ 0.9
DNMT1-215ENST00000588913 NECTIN1Q15223 517 aa20.65■□□□□ 0.9
DNMT1-215ENST00000588913 LPAR1Q92633 364 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 193.5 ms