RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 NOL9Q5SY16 702 aaKnown RBP26.43■■□□□ 1.82
ACTN4-210ENST00000588618 C2orf69Q8N8R5 385 aa26.43■■□□□ 1.82
ACTN4-210ENST00000588618 SPRYD3Q8NCJ5 442 aa26.43■■□□□ 1.82
ACTN4-210ENST00000588618 GTF3C6Q969F1 213 aa26.43■■□□□ 1.82
ACTN4-210ENST00000588618 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.43■■□□□ 1.82
ACTN4-210ENST00000588618 RAD21O60216 631 aa26.42■■□□□ 1.82
ACTN4-210ENST00000588618 DDAH1O94760 285 aa26.42■■□□□ 1.82
ACTN4-210ENST00000588618 METAP2P50579 478 aaKnown RBP eCLIP26.42■■□□□ 1.828e-7■□□□□ 10.9
ACTN4-210ENST00000588618 FKBP1BP68106 108 aa26.42■■□□□ 1.82
ACTN4-210ENST00000588618 MAP3K11Q16584 847 aa26.42■■□□□ 1.82
ACTN4-210ENST00000588618 CCDC144CPQ8IYA2 1237 aa26.42■■□□□ 1.82
ACTN4-210ENST00000588618 LRRC47Q8N1G4 583 aaKnown RBP26.42■■□□□ 1.82
ACTN4-210ENST00000588618 CHMP4CQ96CF2 233 aa26.42■■□□□ 1.82
ACTN4-210ENST00000588618 AS3MTQ9HBK9 375 aa26.42■■□□□ 1.82
ACTN4-210ENST00000588618 FOXD4L1Q9NU39 408 aa26.42■■□□□ 1.82
ACTN4-210ENST00000588618 MTMR7Q9Y216 660 aa26.42■■□□□ 1.82
ACTN4-210ENST00000588618 ITGBL1O95965 494 aaPredicted RBP26.42■■□□□ 1.82
ACTN4-210ENST00000588618 VGLL4Q14135 290 aa26.42■■□□□ 1.82
ACTN4-210ENST00000588618 MOB2Q70IA6 237 aa26.42■■□□□ 1.82
ACTN4-210ENST00000588618 FEZ1Q99689 392 aa26.42■■□□□ 1.82
ACTN4-210ENST00000588618 GBA2Q9HCG7 927 aaPredicted RBP26.42■■□□□ 1.82
ACTN4-210ENST00000588618 FAM217BQ9NTX9 383 aaPredicted RBP26.42■■□□□ 1.82
ACTN4-210ENST00000588618 NID2Q14112 1375 aa26.41■■□□□ 1.82
ACTN4-210ENST00000588618 GOLGA8AA7E2F4 631 aa26.41■■□□□ 1.82
ACTN4-210ENST00000588618 CDC27P30260 824 aa26.41■■□□□ 1.82
ACTN4-210ENST00000588618 RCAN1P53805 252 aa26.41■■□□□ 1.82
ACTN4-210ENST00000588618 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.41■■□□□ 1.82
ACTN4-210ENST00000588618 ZNF784Q8NCA9 323 aaPredicted RBP26.41■■□□□ 1.82
ACTN4-210ENST00000588618 A0A1W2PRG0 241 aa26.4■■□□□ 1.82
ACTN4-210ENST00000588618 TOMM70O94826 608 aa26.4■■□□□ 1.82
ACTN4-210ENST00000588618 PTPRAP18433 802 aa26.4■■□□□ 1.82
ACTN4-210ENST00000588618 CTCFLQ8NI51 663 aaPredicted RBP26.4■■□□□ 1.82
ACTN4-210ENST00000588618 MKL1Q969V6 931 aa26.4■■□□□ 1.82
ACTN4-210ENST00000588618 DHX16O60231 1041 aaKnown RBP26.39■■□□□ 1.82
ACTN4-210ENST00000588618 ACER1Q8TDN7 264 aa26.39■■□□□ 1.82
ACTN4-210ENST00000588618 SYNPO2Q9UMS6 1093 aa26.39■■□□□ 1.82
ACTN4-210ENST00000588618 CCDC196A0A1B0GTZ2 297 aa26.39■■□□□ 1.81
ACTN4-210ENST00000588618 UBE2Q2LH0YL09 131 aa26.39■■□□□ 1.81
ACTN4-210ENST00000588618 ECE1P42892 770 aa26.39■■□□□ 1.81
ACTN4-210ENST00000588618 GOPCQ9HD26 462 aa26.39■■□□□ 1.81
ACTN4-210ENST00000588618 TRPM7Q96QT4 1865 aa26.38■■□□□ 1.81
ACTN4-210ENST00000588618 CPLX1O14810 134 aa26.38■■□□□ 1.81
ACTN4-210ENST00000588618 CTDNEP1O95476 244 aa26.38■■□□□ 1.81
ACTN4-210ENST00000588618 KIF5BP33176 963 aa26.38■■□□□ 1.81
ACTN4-210ENST00000588618 ADD1P35611 737 aaKnown RBP26.38■■□□□ 1.81
ACTN4-210ENST00000588618 PPP2R5BQ15173 497 aa26.38■■□□□ 1.81
ACTN4-210ENST00000588618 RTN1Q16799 776 aa26.38■■□□□ 1.81
ACTN4-210ENST00000588618 RBM46Q8TBY0 533 aaKnown RBP26.38■■□□□ 1.81
ACTN4-210ENST00000588618 SNCAIPQ9Y6H5 919 aa26.38■■□□□ 1.81
ACTN4-210ENST00000588618 ZHX2Q9Y6X8 837 aa26.38■■□□□ 1.81
ACTN4-210ENST00000588618 BAZ2BQ9UIF8 2168 aaKnown RBP26.38■■□□□ 1.81
ACTN4-210ENST00000588618 UNCXA6NJT0 531 aa26.37■■□□□ 1.81
ACTN4-210ENST00000588618 CPLX2Q6PUV4 134 aaKnown RBP26.37■■□□□ 1.81
ACTN4-210ENST00000588618 FANCBQ8NB91 859 aa26.37■■□□□ 1.81
ACTN4-210ENST00000588618 ELP3Q9H9T3 547 aa26.37■■□□□ 1.81
ACTN4-210ENST00000588618 TMX2Q9Y320 296 aa26.37■■□□□ 1.81
ACTN4-210ENST00000588618 ZNF280CQ8ND82 737 aa26.36■■□□□ 1.81
ACTN4-210ENST00000588618 RBM28Q9NW13 759 aaKnown RBP26.36■■□□□ 1.81
ACTN4-210ENST00000588618 ISY1Q9ULR0 285 aaKnown RBP26.36■■□□□ 1.81
ACTN4-210ENST00000588618 MAP3K14Q99558 947 aa26.36■■□□□ 1.81
ACTN4-210ENST00000588618 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.36■■□□□ 1.81
ACTN4-210ENST00000588618 USP17L10C9JJH3 530 aa26.35■■□□□ 1.81
ACTN4-210ENST00000588618 PPFIA3O75145 1194 aa26.35■■□□□ 1.81
ACTN4-210ENST00000588618 PARP1P09874 1014 aaKnown RBP26.35■■□□□ 1.81
ACTN4-210ENST00000588618 SPP2Q13103 211 aa26.35■■□□□ 1.81
ACTN4-210ENST00000588618 ZYXQ15942 572 aaKnown RBP26.35■■□□□ 1.81
ACTN4-210ENST00000588618 NTRK3Q16288 839 aa26.35■■□□□ 1.81
ACTN4-210ENST00000588618 GMCL1P1Q8NEA9 526 aa26.35■■□□□ 1.81
ACTN4-210ENST00000588618 INTS4Q96HW7 963 aaKnown RBP26.35■■□□□ 1.81
ACTN4-210ENST00000588618 WDR18Q9BV38 432 aa26.35■■□□□ 1.81
ACTN4-210ENST00000588618 F5H6K3 240 aa26.34■■□□□ 1.81
ACTN4-210ENST00000588618 JAK2O60674 1132 aa26.34■■□□□ 1.81
ACTN4-210ENST00000588618 PDHBP11177 359 aa26.34■■□□□ 1.81
ACTN4-210ENST00000588618 KLRC3Q07444 240 aa26.34■■□□□ 1.81
ACTN4-210ENST00000588618 KIAA1755Q5JYT7 1200 aa26.34■■□□□ 1.81
ACTN4-210ENST00000588618 LDLRAD1Q5T700 205 aa26.34■■□□□ 1.81
ACTN4-210ENST00000588618 SLFN13Q68D06 897 aa26.34■■□□□ 1.81
ACTN4-210ENST00000588618 ERO1BQ86YB8 467 aa26.34■■□□□ 1.81
ACTN4-210ENST00000588618 SLC10A4Q96EP9 437 aa26.34■■□□□ 1.81
ACTN4-210ENST00000588618 CLMNQ96JQ2 1002 aa26.34■■□□□ 1.81
ACTN4-210ENST00000588618 PTPRFP10586 1907 aa26.34■■□□□ 1.81
ACTN4-210ENST00000588618 TRIM75PA6NK02 468 aa26.34■■□□□ 1.81
ACTN4-210ENST00000588618 CDKL5O76039 1030 aa26.34■■□□□ 1.81
ACTN4-210ENST00000588618 SNHG28P0DPA3 235 aa26.34■■□□□ 1.81
ACTN4-210ENST00000588618 SLC1A4P43007 532 aa26.34■■□□□ 1.81
ACTN4-210ENST00000588618 USP14P54578 494 aa26.34■■□□□ 1.81
ACTN4-210ENST00000588618 GRM4Q14833 912 aa26.34■■□□□ 1.81
ACTN4-210ENST00000588618 CCDC96Q2M329 555 aa26.34■■□□□ 1.81
ACTN4-210ENST00000588618 CST9Q5W186 159 aa26.34■■□□□ 1.81
ACTN4-210ENST00000588618 CMTR1Q8N1G2 835 aaKnown RBP26.34■■□□□ 1.81
ACTN4-210ENST00000588618 STAG2Q8N3U4 1231 aa26.34■■□□□ 1.81
ACTN4-210ENST00000588618 NSUN7Q8NE18 718 aaKnown RBP26.34■■□□□ 1.81
ACTN4-210ENST00000588618 PASKQ96RG2 1323 aa26.33■■□□□ 1.81
ACTN4-210ENST00000588618 MYH6P13533 1939 aa26.33■■□□□ 1.81
ACTN4-210ENST00000588618 GNAQP50148 359 aa26.33■■□□□ 1.81
ACTN4-210ENST00000588618 PPATQ06203 517 aa26.33■■□□□ 1.81
ACTN4-210ENST00000588618 MTMR2Q13614 643 aa26.33■■□□□ 1.81
ACTN4-210ENST00000588618 USP17L2Q6R6M4 530 aa26.33■■□□□ 1.81
ACTN4-210ENST00000588618 DCAF4Q8WV16 495 aa26.33■■□□□ 1.81
ACTN4-210ENST00000588618 OTUD5Q96G74 571 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms