RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 ZNF503-AS2A6NEH8 195 aa7.3□□□□□ -1.24
VMP1-205ENST00000587470 SLC22A31A6NKX4 558 aa7.3□□□□□ -1.24
VMP1-205ENST00000587470 WASH4PA8MWX3 477 aa7.3□□□□□ -1.24
VMP1-205ENST00000587470 DNAJA2O60884 412 aa7.3□□□□□ -1.24
VMP1-205ENST00000587470 GLI1P08151 1106 aa7.3□□□□□ -1.24
VMP1-205ENST00000587470 ZNF16P17020 682 aaPredicted RBP7.3□□□□□ -1.24
VMP1-205ENST00000587470 GBP1P32455 592 aa7.3□□□□□ -1.24
VMP1-205ENST00000587470 TTC6Q86TZ1 520 aa7.3□□□□□ -1.24
VMP1-205ENST00000587470 TSPYL5Q86VY4 417 aaPredicted RBP7.3□□□□□ -1.24
VMP1-205ENST00000587470 KIF2CQ99661 725 aa7.3□□□□□ -1.24
VMP1-205ENST00000587470 PCDHB14Q9Y5E9 798 aa7.3□□□□□ -1.24
VMP1-205ENST00000587470 LRRC10BA6NIK2 292 aa7.29□□□□□ -1.24
VMP1-205ENST00000587470 DBX1A6NMT0 343 aa7.29□□□□□ -1.24
VMP1-205ENST00000587470 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.29□□□□□ -1.24
VMP1-205ENST00000587470 RGS13O14921 159 aa7.29□□□□□ -1.24
VMP1-205ENST00000587470 LRRN2O75325 713 aa7.29□□□□□ -1.24
VMP1-205ENST00000587470 TMEM67Q5HYA8 995 aa7.29□□□□□ -1.24
VMP1-205ENST00000587470 TMEM87AQ8NBN3 555 aa7.29□□□□□ -1.24
VMP1-205ENST00000587470 EHMT1Q9H9B1 1298 aa7.29□□□□□ -1.24
VMP1-205ENST00000587470 ADAMTS1Q9UHI8 967 aa7.29□□□□□ -1.24
VMP1-205ENST00000587470 DUSP13Q9UII6 198 aa7.29□□□□□ -1.24
VMP1-205ENST00000587470 TMEM59LQ9UK28 342 aa7.29□□□□□ -1.24
VMP1-205ENST00000587470 DNAJC25-GNG10A0A024R161 153 aa7.28□□□□□ -1.24
VMP1-205ENST00000587470 RAC2P15153 192 aa7.28□□□□□ -1.24
VMP1-205ENST00000587470 CRKP46108 304 aa7.28□□□□□ -1.24
VMP1-205ENST00000587470 CHMP4BP1P59074 171 aa7.28□□□□□ -1.24
VMP1-205ENST00000587470 RALGPS1Q5JS13 557 aa7.28□□□□□ -1.24
VMP1-205ENST00000587470 VWCEQ96DN2 955 aa7.28□□□□□ -1.24
VMP1-205ENST00000587470 GMIPQ9P107 970 aa7.28□□□□□ -1.24
VMP1-205ENST00000587470 SHROOM4Q9ULL8 1493 aa7.28□□□□□ -1.24
VMP1-205ENST00000587470 KRTAP9-7A8MTY7 169 aa7.27□□□□□ -1.25
VMP1-205ENST00000587470 RAG1P15918 1043 aa7.27□□□□□ -1.25
VMP1-205ENST00000587470 EGR3Q06889 387 aa7.27□□□□□ -1.25
VMP1-205ENST00000587470 MLANAQ16655 118 aa7.27□□□□□ -1.25
VMP1-205ENST00000587470 SEZ6Q53EL9 994 aa7.27□□□□□ -1.25
VMP1-205ENST00000587470 ARSHQ5FYA8 562 aa7.27□□□□□ -1.25
VMP1-205ENST00000587470 LDLRAD1Q5T700 205 aa7.27□□□□□ -1.25
VMP1-205ENST00000587470 KSR1Q8IVT5 923 aa7.27□□□□□ -1.25
VMP1-205ENST00000587470 REXO1Q8N1G1 1221 aaKnown RBP7.27□□□□□ -1.25
VMP1-205ENST00000587470 LIN37Q96GY3 246 aaPredicted RBP7.27□□□□□ -1.25
VMP1-205ENST00000587470 FAM84AQ96KN4 292 aa7.27□□□□□ -1.25
VMP1-205ENST00000587470 KRTAP4-2Q9BYR5 136 aa7.27□□□□□ -1.25
VMP1-205ENST00000587470 ADAMTS10Q9H324 1103 aa7.27□□□□□ -1.25
VMP1-205ENST00000587470 UBP1Q9NZI7 540 aa7.27□□□□□ -1.25
VMP1-205ENST00000587470 EIF4G1Q04637 1599 aaKnown RBP7.26□□□□□ -1.25
VMP1-205ENST00000587470 RBM47A0AV96 593 aaKnown RBP7.26□□□□□ -1.25
VMP1-205ENST00000587470 HK2P52789 917 aa7.26□□□□□ -1.25
VMP1-205ENST00000587470 APOBRQ0VD83 1088 aa7.26□□□□□ -1.25
VMP1-205ENST00000587470 FBLN7Q53RD9 439 aa7.26□□□□□ -1.25
VMP1-205ENST00000587470 CDCP2Q5VXM1 449 aa7.26□□□□□ -1.25
VMP1-205ENST00000587470 MPZL3Q6UWV2 235 aa7.26□□□□□ -1.25
VMP1-205ENST00000587470 SLC38A3Q99624 504 aa7.26□□□□□ -1.25
VMP1-205ENST00000587470 NT5C1AQ9BXI3 368 aa7.26□□□□□ -1.25
VMP1-205ENST00000587470 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.26□□□□□ -1.25
VMP1-205ENST00000587470 UBOX5O94941 541 aa7.25□□□□□ -1.25
VMP1-205ENST00000587470 LTKP29376 864 aa7.25□□□□□ -1.25
VMP1-205ENST00000587470 ZNF165P49910 485 aa7.25□□□□□ -1.25
VMP1-205ENST00000587470 MFAP1P55081 439 aaKnown RBP7.25□□□□□ -1.25
VMP1-205ENST00000587470 PKN1Q16512 942 aa7.25□□□□□ -1.25
VMP1-205ENST00000587470 CLEC16AQ2KHT3 1053 aa7.25□□□□□ -1.25
VMP1-205ENST00000587470 GK5Q6ZS86 529 aa7.25□□□□□ -1.25
VMP1-205ENST00000587470 ABHD4Q8TB40 342 aa7.25□□□□□ -1.25
VMP1-205ENST00000587470 MYLIPQ8WY64 445 aa7.25□□□□□ -1.25
VMP1-205ENST00000587470 NKD1Q969G9 470 aa7.25□□□□□ -1.25
VMP1-205ENST00000587470 SYTL4Q96C24 671 aaPredicted RBP7.25□□□□□ -1.25
VMP1-205ENST00000587470 BACH2Q9BYV9 841 aa7.25□□□□□ -1.25
VMP1-205ENST00000587470 ASCC2Q9H1I8 757 aaPredicted RBP7.25□□□□□ -1.25
VMP1-205ENST00000587470 CNNM2Q9H8M5 875 aa7.25□□□□□ -1.25
VMP1-205ENST00000587470 SHISA3A0PJX4 238 aa7.24□□□□□ -1.25
VMP1-205ENST00000587470 HPXP02790 462 aa7.24□□□□□ -1.25
VMP1-205ENST00000587470 MCM4P33991 863 aa7.24□□□□□ -1.25
VMP1-205ENST00000587470 ZNF76P36508 570 aa7.24□□□□□ -1.25
VMP1-205ENST00000587470 RNF4P78317 190 aa7.24□□□□□ -1.25
VMP1-205ENST00000587470 CLCQ05315 142 aa7.24□□□□□ -1.25
VMP1-205ENST00000587470 RAD51AP2Q09MP3 1159 aa7.24□□□□□ -1.25
VMP1-205ENST00000587470 LRRFIP1Q32MZ4 808 aaKnown RBP7.24□□□□□ -1.25
VMP1-205ENST00000587470 SLITRK4Q8IW52 837 aa7.24□□□□□ -1.25
VMP1-205ENST00000587470 BHLHE22Q8NFJ8 381 aaPredicted RBP7.24□□□□□ -1.25
VMP1-205ENST00000587470 ENOX1Q8TC92 643 aaKnown RBP7.24□□□□□ -1.25
VMP1-205ENST00000587470 DHX38Q92620 1227 aaKnown RBP7.24□□□□□ -1.25
VMP1-205ENST00000587470 ATG4CQ96DT6 458 aa7.24□□□□□ -1.25
VMP1-205ENST00000587470 PCDHA11Q9Y5I1 949 aa7.24□□□□□ -1.25
VMP1-205ENST00000587470 ZGLP1P0C6A0 271 aa7.23□□□□□ -1.25
VMP1-205ENST00000587470 CCNFP41002 786 aa7.23□□□□□ -1.25
VMP1-205ENST00000587470 ERVFC1P60507 584 aa7.23□□□□□ -1.25
VMP1-205ENST00000587470 OVOS1Q6IE37 1185 aa7.23□□□□□ -1.25
VMP1-205ENST00000587470 PRR23BQ6ZRT6 265 aa7.23□□□□□ -1.25
VMP1-205ENST00000587470 NLRC3Q7RTR2 1065 aa7.23□□□□□ -1.25
VMP1-205ENST00000587470 KIAA0825Q8IV33 1275 aa7.23□□□□□ -1.25
VMP1-205ENST00000587470 PDZD8Q8NEN9 1154 aa7.23□□□□□ -1.25
VMP1-205ENST00000587470 EAF1Q96JC9 268 aaPredicted RBP7.23□□□□□ -1.25
VMP1-205ENST00000587470 SPON2Q9BUD6 331 aa7.23□□□□□ -1.25
VMP1-205ENST00000587470 METTL5Q9NRN9 209 aaKnown RBP7.23□□□□□ -1.25
VMP1-205ENST00000587470 NMIQ13287 307 aaPredicted RBP7.22□□□□□ -1.25
VMP1-205ENST00000587470 NBPF12Q5TAG4 269 aaPredicted RBP7.22□□□□□ -1.25
VMP1-205ENST00000587470 OXR1Q8N573 874 aa7.22□□□□□ -1.25
VMP1-205ENST00000587470 ZCCHC6Q5VYS8 1495 aaKnown RBP7.22□□□□□ -1.25
VMP1-205ENST00000587470 POLR2BP30876 1174 aaKnown RBP7.21□□□□□ -1.26
VMP1-205ENST00000587470 C1QL4Q86Z23 238 aa7.21□□□□□ -1.26
VMP1-205ENST00000587470 DAGLBQ8NCG7 672 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms