RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 APOA5Q6Q788 366 aa17.45■□□□□ 0.38
NFIX-208ENST00000587260 SIAH1Q8IUQ4 282 aa17.45■□□□□ 0.38
NFIX-208ENST00000587260 ACER1Q8TDN7 264 aa17.45■□□□□ 0.38
NFIX-208ENST00000587260 GTF3C6Q969F1 213 aa17.45■□□□□ 0.38
NFIX-208ENST00000587260 OTUD5Q96G74 571 aa17.45■□□□□ 0.38
NFIX-208ENST00000587260 ARHGEF10LQ9HCE6 1279 aa17.45■□□□□ 0.38
NFIX-208ENST00000587260 GINM1Q9NU53 330 aa17.45■□□□□ 0.38
NFIX-208ENST00000587260 NID2Q14112 1375 aa17.44■□□□□ 0.38
NFIX-208ENST00000587260 A0A1W2PRG0 241 aa17.44■□□□□ 0.38
NFIX-208ENST00000587260 ST3GAL1Q11201 340 aa17.44■□□□□ 0.38
NFIX-208ENST00000587260 RASGRP2Q7LDG7 609 aa17.44■□□□□ 0.38
NFIX-208ENST00000587260 FEZ1Q99689 392 aa17.44■□□□□ 0.38
NFIX-208ENST00000587260 SLKQ9H2G2 1235 aaPredicted RBP17.44■□□□□ 0.38
NFIX-208ENST00000587260 NYAP2Q9P242 653 aa17.44■□□□□ 0.38
NFIX-208ENST00000587260 HPS5Q9UPZ3 1129 aa17.44■□□□□ 0.38
NFIX-208ENST00000587260 ZHX2Q9Y6X8 837 aa17.44■□□□□ 0.38
NFIX-208ENST00000587260 TRIM75PA6NK02 468 aa17.43■□□□□ 0.38
NFIX-208ENST00000587260 GOLGA8BA8MQT2 603 aa17.43■□□□□ 0.38
NFIX-208ENST00000587260 HSP90AA1P07900 732 aaKnown RBP17.43■□□□□ 0.38
NFIX-208ENST00000587260 TOP1P11387 765 aaKnown RBP17.43■□□□□ 0.38
NFIX-208ENST00000587260 RXRAP19793 462 aa17.43■□□□□ 0.38
NFIX-208ENST00000587260 HUNKP57058 714 aa17.43■□□□□ 0.38
NFIX-208ENST00000587260 PPP4R3BQ5MIZ7 849 aa17.43■□□□□ 0.38
NFIX-208ENST00000587260 MICU3Q86XE3 530 aa17.43■□□□□ 0.38
NFIX-208ENST00000587260 ZNF654Q8IZM8 581 aa17.43■□□□□ 0.38
NFIX-208ENST00000587260 PNMA1Q8ND90 353 aa17.43■□□□□ 0.38
NFIX-208ENST00000587260 AS3MTQ9HBK9 375 aa17.43■□□□□ 0.38
NFIX-208ENST00000587260 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.43■□□□□ 0.38
NFIX-208ENST00000587260 SLC12A7Q9Y666 1083 aa17.43■□□□□ 0.38
NFIX-208ENST00000587260 SCRN1Q12765 414 aa17.42■□□□□ 0.38
NFIX-208ENST00000587260 STK3Q13188 491 aa17.42■□□□□ 0.38
NFIX-208ENST00000587260 DGKZQ13574 1117 aa17.42■□□□□ 0.38
NFIX-208ENST00000587260 MTMR2Q13614 643 aa17.42■□□□□ 0.38
NFIX-208ENST00000587260 PPP2R5BQ15173 497 aa17.42■□□□□ 0.38
NFIX-208ENST00000587260 SYNE3Q6ZMZ3 975 aa17.42■□□□□ 0.38
NFIX-208ENST00000587260 CCDC144CPQ8IYA2 1237 aa17.42■□□□□ 0.38
NFIX-208ENST00000587260 NECAB1Q8N987 351 aa17.42■□□□□ 0.38
NFIX-208ENST00000587260 NUP133Q8WUM0 1156 aa17.42■□□□□ 0.38
NFIX-208ENST00000587260 OPTNQ96CV9 577 aa17.42■□□□□ 0.38
NFIX-208ENST00000587260 CWC22Q9HCG8 908 aaKnown RBP17.42■□□□□ 0.38
NFIX-208ENST00000587260 ABT1Q9ULW3 272 aaKnown RBP17.42■□□□□ 0.38
NFIX-208ENST00000587260 LOC285556D6RIA3 1793 aa17.42■□□□□ 0.38
NFIX-208ENST00000587260 SPDYE5A6NIY4 337 aa17.42■□□□□ 0.38
NFIX-208ENST00000587260 ZBTB43O43298 467 aa17.42■□□□□ 0.38
NFIX-208ENST00000587260 DDIT3P35638 169 aa17.42■□□□□ 0.38
NFIX-208ENST00000587260 SPP2Q13103 211 aa17.42■□□□□ 0.38
NFIX-208ENST00000587260 CATIPQ7Z7H3 387 aa17.42■□□□□ 0.38
NFIX-208ENST00000587260 ERO1BQ86YB8 467 aa17.42■□□□□ 0.38
NFIX-208ENST00000587260 CCDC83Q8IWF9 413 aa17.42■□□□□ 0.38
NFIX-208ENST00000587260 ZNF280CQ8ND82 737 aa17.42■□□□□ 0.38
NFIX-208ENST00000587260 LLPHQ9BRT6 129 aaKnown RBP17.42■□□□□ 0.38
NFIX-208ENST00000587260 TMEM88BA6NKF7 163 aa17.41■□□□□ 0.38
NFIX-208ENST00000587260 DHX16O60231 1041 aaKnown RBP17.41■□□□□ 0.38
NFIX-208ENST00000587260 DDAH1O94760 285 aa17.41■□□□□ 0.38
NFIX-208ENST00000587260 CALM1P0DP23 149 aa17.41■□□□□ 0.38
NFIX-208ENST00000587260 CALM2P0DP24 149 aa17.41■□□□□ 0.38
NFIX-208ENST00000587260 CALM3P0DP25 149 aa17.41■□□□□ 0.38
NFIX-208ENST00000587260 TROAPQ12815 778 aa17.41■□□□□ 0.38
NFIX-208ENST00000587260 MKRN3Q13064 507 aaKnown RBP17.41■□□□□ 0.38
NFIX-208ENST00000587260 SAPCD2Q86UD0 394 aa17.41■□□□□ 0.38
NFIX-208ENST00000587260 SPICE1Q8N0Z3 855 aa17.41■□□□□ 0.38
NFIX-208ENST00000587260 SLC10A4Q96EP9 437 aa17.41■□□□□ 0.38
NFIX-208ENST00000587260 MAP3K14Q99558 947 aa17.41■□□□□ 0.38
NFIX-208ENST00000587260 SH2D4AQ9H788 454 aa17.41■□□□□ 0.38
NFIX-208ENST00000587260 ISY1Q9ULR0 285 aaKnown RBP17.41■□□□□ 0.38
NFIX-208ENST00000587260 TMX2Q9Y320 296 aa17.41■□□□□ 0.38
NFIX-208ENST00000587260 GJA5P36382 358 aa17.4■□□□□ 0.38
NFIX-208ENST00000587260 PPATQ06203 517 aa17.4■□□□□ 0.38
NFIX-208ENST00000587260 MKL1Q969V6 931 aa17.4■□□□□ 0.38
NFIX-208ENST00000587260 WDR18Q9BV38 432 aa17.4■□□□□ 0.38
NFIX-208ENST00000587260 AFG3L2Q9Y4W6 797 aa17.4■□□□□ 0.38
NFIX-208ENST00000587260 TLL2Q9Y6L7 1015 aa17.4■□□□□ 0.38
NFIX-208ENST00000587260 GOLGA8AA7E2F4 631 aa17.39■□□□□ 0.37
NFIX-208ENST00000587260 USP17L10C9JJH3 530 aa17.39■□□□□ 0.37
NFIX-208ENST00000587260 IRF6O14896 467 aa17.39■□□□□ 0.37
NFIX-208ENST00000587260 NDUFB10O96000 172 aa17.39■□□□□ 0.37
NFIX-208ENST00000587260 METAP2P50579 478 aaKnown RBP eCLIP17.39■□□□□ 0.37
NFIX-208ENST00000587260 CCT2P78371 535 aaKnown RBP17.39■□□□□ 0.37
NFIX-208ENST00000587260 KIAA1755Q5JYT7 1200 aa17.39■□□□□ 0.37
NFIX-208ENST00000587260 SPRYD3Q8NCJ5 442 aa17.39■□□□□ 0.37
NFIX-208ENST00000587260 WNK4Q96J92 1243 aa17.39■□□□□ 0.37
NFIX-208ENST00000587260 GOPCQ9HD26 462 aa17.39■□□□□ 0.37
NFIX-208ENST00000587260 FAM217BQ9NTX9 383 aaPredicted RBP17.39■□□□□ 0.37
NFIX-208ENST00000587260 FRMPD2Q68DX3 1309 aaPredicted RBP17.39■□□□□ 0.37
NFIX-208ENST00000587260 CEP350Q5VT06 3117 aa17.38■□□□□ 0.37
NFIX-208ENST00000587260 UNCXA6NJT0 531 aa17.38■□□□□ 0.37
NFIX-208ENST00000587260 F5H6K3 240 aa17.38■□□□□ 0.37
NFIX-208ENST00000587260 HMGCS2P54868 508 aa17.38■□□□□ 0.37
NFIX-208ENST00000587260 KLRC3Q07444 240 aa17.38■□□□□ 0.37
NFIX-208ENST00000587260 PPIL2Q13356 520 aa17.38■□□□□ 0.37
NFIX-208ENST00000587260 CCDC96Q2M329 555 aa17.38■□□□□ 0.37
NFIX-208ENST00000587260 SLFN13Q68D06 897 aa17.38■□□□□ 0.37
NFIX-208ENST00000587260 FANCBQ8NB91 859 aa17.38■□□□□ 0.37
NFIX-208ENST00000587260 GMCL1P1Q8NEA9 526 aa17.38■□□□□ 0.37
NFIX-208ENST00000587260 SMARCC2Q8TAQ2 1214 aa17.38■□□□□ 0.37
NFIX-208ENST00000587260 NUP88Q99567 741 aaPredicted RBP17.38■□□□□ 0.37
NFIX-208ENST00000587260 KIAA1683Q9H0B3 1180 aa17.38■□□□□ 0.37
NFIX-208ENST00000587260 VCPKMTQ9H867 229 aa17.38■□□□□ 0.37
NFIX-208ENST00000587260 SYNPO2Q9UMS6 1093 aa17.38■□□□□ 0.37
NFIX-208ENST00000587260 CCDC196A0A1B0GTZ2 297 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms