RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 TMX2Q9Y320 296 aa20.36■□□□□ 0.85
TRIM47-203ENST00000586495 TRIM32Q13049 653 aa20.35■□□□□ 0.85
TRIM47-203ENST00000586495 HABP4Q5JVS0 413 aaKnown RBP20.35■□□□□ 0.85
TRIM47-203ENST00000586495 USP6NLQ92738 828 aa20.35■□□□□ 0.85
TRIM47-203ENST00000586495 APBA2Q99767 749 aa20.35■□□□□ 0.85
TRIM47-203ENST00000586495 TANGO6Q9C0B7 1094 aa20.35■□□□□ 0.85
TRIM47-203ENST00000586495 IVNS1ABPQ9Y6Y0 642 aa20.35■□□□□ 0.85
TRIM47-203ENST00000586495 PLXNB2O15031 1838 aa20.34■□□□□ 0.85
TRIM47-203ENST00000586495 MYH8P13535 1937 aa20.34■□□□□ 0.85
TRIM47-203ENST00000586495 GNAT2P19087 354 aa20.34■□□□□ 0.85
TRIM47-203ENST00000586495 MAP2K5Q13163 448 aa20.34■□□□□ 0.85
TRIM47-203ENST00000586495 SBK1Q52WX2 424 aa20.34■□□□□ 0.85
TRIM47-203ENST00000586495 ANKLE1Q8NAG6 615 aa20.34■□□□□ 0.85
TRIM47-203ENST00000586495 OSBP2Q969R2 916 aa20.34■□□□□ 0.85
TRIM47-203ENST00000586495 VCPKMTQ9H867 229 aa20.34■□□□□ 0.85
TRIM47-203ENST00000586495 KANSL2Q9H9L4 492 aa20.34■□□□□ 0.85
TRIM47-203ENST00000586495 BTBD7Q9P203 1132 aa20.34■□□□□ 0.85
TRIM47-203ENST00000586495 NR2E3Q9Y5X4 410 aa20.34■□□□□ 0.85
TRIM47-203ENST00000586495 SLC15A5A6NIM6 579 aa20.33■□□□□ 0.85
TRIM47-203ENST00000586495 GSG1L2A8MUP6 293 aa20.33■□□□□ 0.85
TRIM47-203ENST00000586495 H0YGN5 161 aa20.33■□□□□ 0.85
TRIM47-203ENST00000586495 MAP3K21Q5TCX8 1036 aa20.33■□□□□ 0.85
TRIM47-203ENST00000586495 SIAH1Q8IUQ4 282 aa20.33■□□□□ 0.85
TRIM47-203ENST00000586495 SMIM22K7EJ46 135 aa20.32■□□□□ 0.84
TRIM47-203ENST00000586495 PRKAR2AP13861 404 aaKnown RBP20.32■□□□□ 0.84
TRIM47-203ENST00000586495 PTPREP23469 700 aa20.32■□□□□ 0.84
TRIM47-203ENST00000586495 NECAB2Q7Z6G3 386 aa20.32■□□□□ 0.84
TRIM47-203ENST00000586495 MB21D1Q8N884 522 aa20.32■□□□□ 0.84
TRIM47-203ENST00000586495 WDR46O15213 610 aaKnown RBP20.31■□□□□ 0.84
TRIM47-203ENST00000586495 GPAA1O43292 621 aa20.31■□□□□ 0.84
TRIM47-203ENST00000586495 FLOT1O75955 427 aa20.31■□□□□ 0.84
TRIM47-203ENST00000586495 DSG3P32926 999 aa20.31■□□□□ 0.84
TRIM47-203ENST00000586495 ATP2B2Q01814 1243 aa20.31■□□□□ 0.84
TRIM47-203ENST00000586495 CLEC10AQ8IUN9 316 aa20.31■□□□□ 0.84
TRIM47-203ENST00000586495 SPICE1Q8N0Z3 855 aa20.31■□□□□ 0.84
TRIM47-203ENST00000586495 PAWRQ96IZ0 340 aaKnown RBP20.31■□□□□ 0.84
TRIM47-203ENST00000586495 MKNK2Q9HBH9 465 aa20.31■□□□□ 0.84
TRIM47-203ENST00000586495 MINDY4BA8MYZ0 360 aa20.3■□□□□ 0.84
TRIM47-203ENST00000586495 APPP05067 770 aa20.3■□□□□ 0.84
TRIM47-203ENST00000586495 EEF2P13639 858 aaKnown RBP20.3■□□□□ 0.84
TRIM47-203ENST00000586495 TDO2P48775 406 aa20.3■□□□□ 0.84
TRIM47-203ENST00000586495 CACNB2Q08289 660 aaPredicted RBP20.3■□□□□ 0.84
TRIM47-203ENST00000586495 CCL14Q16627 93 aa20.3■□□□□ 0.84
TRIM47-203ENST00000586495 KIAA1755Q5JYT7 1200 aa20.3■□□□□ 0.84
TRIM47-203ENST00000586495 MFSD14CQ5VZR4 134 aa20.3■□□□□ 0.84
TRIM47-203ENST00000586495 PI4K2BQ8TCG2 481 aa20.3■□□□□ 0.84
TRIM47-203ENST00000586495 CRBNQ96SW2 442 aa20.3■□□□□ 0.84
TRIM47-203ENST00000586495 ZNF287Q9HBT7 754 aa20.3■□□□□ 0.84
TRIM47-203ENST00000586495 GOPCQ9HD26 462 aa20.3■□□□□ 0.84
TRIM47-203ENST00000586495 COLQQ9Y215 455 aaPredicted RBP20.3■□□□□ 0.84
TRIM47-203ENST00000586495 PATL2C9JE40 543 aaKnown RBP20.29■□□□□ 0.84
TRIM47-203ENST00000586495 STRNO43815 780 aa20.29■□□□□ 0.84
TRIM47-203ENST00000586495 EVI5O60447 810 aa20.29■□□□□ 0.84
TRIM47-203ENST00000586495 MX1P20591 662 aa20.29■□□□□ 0.84
TRIM47-203ENST00000586495 GRB14Q14449 540 aa20.29■□□□□ 0.84
TRIM47-203ENST00000586495 SHCBP1Q8NEM2 672 aa20.29■□□□□ 0.84
TRIM47-203ENST00000586495 FSD1Q9BTV5 496 aa20.29■□□□□ 0.84
TRIM47-203ENST00000586495 MOV10L1Q9BXT6 1211 aaKnown RBP20.29■□□□□ 0.84
TRIM47-203ENST00000586495 SPATC1LQ9H0A9 340 aa20.29■□□□□ 0.84
TRIM47-203ENST00000586495 OGDHLQ9ULD0 1010 aa20.29■□□□□ 0.84
TRIM47-203ENST00000586495 HOXC6P09630 235 aa20.28■□□□□ 0.84
TRIM47-203ENST00000586495 ANKRD45Q5TZF3 282 aa20.28■□□□□ 0.84
TRIM47-203ENST00000586495 NACAP1Q9BZK3 213 aa20.28■□□□□ 0.84
TRIM47-203ENST00000586495 NBPF3Q9H094 633 aa20.28■□□□□ 0.84
TRIM47-203ENST00000586495 ROBO3Q96MS0 1386 aa20.27■□□□□ 0.84
TRIM47-203ENST00000586495 M0R2C6 588 aa20.27■□□□□ 0.84
TRIM47-203ENST00000586495 ERCC3P19447 782 aa20.27■□□□□ 0.84
TRIM47-203ENST00000586495 RASA1P20936 1047 aa20.27■□□□□ 0.84
TRIM47-203ENST00000586495 PLS1Q14651 629 aa20.27■□□□□ 0.84
TRIM47-203ENST00000586495 DPP9Q86TI2 863 aa20.27■□□□□ 0.84
TRIM47-203ENST00000586495 IFNL3Q8IZI9 196 aa20.27■□□□□ 0.84
TRIM47-203ENST00000586495 STK11IPQ8N1F8 1099 aa20.27■□□□□ 0.84
TRIM47-203ENST00000586495 OTUD7AQ8TE49 926 aaPredicted RBP20.27■□□□□ 0.84
TRIM47-203ENST00000586495 DIS3LQ8TF46 1054 aaKnown RBP20.27■□□□□ 0.84
TRIM47-203ENST00000586495 ATG4CQ96DT6 458 aa20.27■□□□□ 0.84
TRIM47-203ENST00000586495 YTHDC1Q96MU7 727 aaKnown RBP20.27■□□□□ 0.84
TRIM47-203ENST00000586495 EPB41L4AQ9HCS5 686 aaPredicted RBP20.27■□□□□ 0.84
TRIM47-203ENST00000586495 SLC5A4Q9NY91 659 aa20.27■□□□□ 0.84
TRIM47-203ENST00000586495 RAD21O60216 631 aa20.26■□□□□ 0.83
TRIM47-203ENST00000586495 HDAC1Q13547 482 aaPredicted RBP20.26■□□□□ 0.83
TRIM47-203ENST00000586495 AAMPQ13685 434 aa20.26■□□□□ 0.83
TRIM47-203ENST00000586495 SAMD1Q6SPF0 538 aaPredicted RBP20.26■□□□□ 0.83
TRIM47-203ENST00000586495 ZNF444Q8N0Y2 327 aaPredicted RBP20.26■□□□□ 0.83
TRIM47-203ENST00000586495 MROH8Q9H579 483 aa20.26■□□□□ 0.83
TRIM47-203ENST00000586495 C11orf49Q9H6J7 331 aa20.26■□□□□ 0.83
TRIM47-203ENST00000586495 NYAP2Q9P242 653 aa20.26■□□□□ 0.83
TRIM47-203ENST00000586495 ADORA2AP29274 412 aa20.25■□□□□ 0.83
TRIM47-203ENST00000586495 CCND3P30281 292 aaPredicted RBP20.25■□□□□ 0.83
TRIM47-203ENST00000586495 ZMYM1Q5SVZ6 1142 aa20.25■□□□□ 0.83
TRIM47-203ENST00000586495 CHRDL2Q6WN34 429 aa20.25■□□□□ 0.83
TRIM47-203ENST00000586495 NCAPG2Q86XI2 1143 aa20.25■□□□□ 0.83
TRIM47-203ENST00000586495 NPLOC4Q8TAT6 608 aa20.25■□□□□ 0.83
TRIM47-203ENST00000586495 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.25■□□□□ 0.83
TRIM47-203ENST00000586495 FLRT1Q9NZU1 646 aa20.25■□□□□ 0.83
TRIM47-203ENST00000586495 MSCO60682 206 aa20.24■□□□□ 0.83
TRIM47-203ENST00000586495 SLC25A27O95847 323 aa20.24■□□□□ 0.83
TRIM47-203ENST00000586495 SLC3A2P08195 630 aaKnown RBP20.24■□□□□ 0.83
TRIM47-203ENST00000586495 ABRAQ8N0Z2 381 aa20.24■□□□□ 0.83
TRIM47-203ENST00000586495 SEC62Q99442 399 aaKnown RBP20.24■□□□□ 0.83
TRIM47-203ENST00000586495 NAPBQ9H115 298 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms