RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 ANKRD13CQ8N6S4 541 aa27.44■■□□□ 1.98
LSM7-202ENST00000585395 ASCC2Q9H1I8 757 aaPredicted RBP27.44■■□□□ 1.98
LSM7-202ENST00000585395 EPB41L4AQ9HCS5 686 aaPredicted RBP27.44■■□□□ 1.98
LSM7-202ENST00000585395 MYPNQ86TC9 1320 aa27.43■■□□□ 1.98
LSM7-202ENST00000585395 CDC45O75419 566 aa27.43■■□□□ 1.98
LSM7-202ENST00000585395 GCLCP48506 637 aaPredicted RBP27.43■■□□□ 1.98
LSM7-202ENST00000585395 TMEM179Q6ZVK1 233 aa27.43■■□□□ 1.98
LSM7-202ENST00000585395 STK11IPQ8N1F8 1099 aa27.43■■□□□ 1.98
LSM7-202ENST00000585395 KIAA1211Q6ZU35 1233 aa27.42■■□□□ 1.98
LSM7-202ENST00000585395 C16orf86Q6ZW13 317 aa27.42■■□□□ 1.98
LSM7-202ENST00000585395 CCDC17Q96LX7 622 aa27.42■■□□□ 1.98
LSM7-202ENST00000585395 DSCC1Q9BVC3 393 aa27.42■■□□□ 1.98
LSM7-202ENST00000585395 BIN2Q9UBW5 565 aaPredicted RBP27.42■■□□□ 1.98
LSM7-202ENST00000585395 CTNNA3Q9UI47 895 aa27.42■■□□□ 1.98
LSM7-202ENST00000585395 MGAMO43451 1857 aa27.42■■□□□ 1.98
LSM7-202ENST00000585395 FARP2O94887 1054 aaPredicted RBP27.41■■□□□ 1.98
LSM7-202ENST00000585395 PDE4BQ07343 736 aa27.41■■□□□ 1.98
LSM7-202ENST00000585395 ARHGEF10LQ9HCE6 1279 aa27.41■■□□□ 1.98
LSM7-202ENST00000585395 ROBO3Q96MS0 1386 aa27.4■■□□□ 1.98
LSM7-202ENST00000585395 CAPN2P17655 700 aa27.4■■□□□ 1.98
LSM7-202ENST00000585395 VPS53Q5VIR6 699 aa27.4■■□□□ 1.98
LSM7-202ENST00000585395 ACER1Q8TDN7 264 aa27.4■■□□□ 1.98
LSM7-202ENST00000585395 U2AF1L4Q8WU68 220 aaKnown RBP27.4■■□□□ 1.98
LSM7-202ENST00000585395 KIAA1683Q9H0B3 1180 aa27.4■■□□□ 1.98
LSM7-202ENST00000585395 MKNK2Q9HBH9 465 aa27.4■■□□□ 1.98
LSM7-202ENST00000585395 EMILIN3Q9NT22 766 aa27.4■■□□□ 1.98
LSM7-202ENST00000585395 SGSM2O43147 1006 aa27.39■■□□□ 1.98
LSM7-202ENST00000585395 AKR1B1P15121 316 aa27.39■■□□□ 1.98
LSM7-202ENST00000585395 ATP2B2Q01814 1243 aa27.39■■□□□ 1.98
LSM7-202ENST00000585395 ICA1Q05084 483 aa27.39■■□□□ 1.98
LSM7-202ENST00000585395 PPARAQ07869 468 aa27.39■■□□□ 1.98
LSM7-202ENST00000585395 FAM110CQ1W6H9 321 aa27.39■■□□□ 1.98
LSM7-202ENST00000585395 SLAIN1Q8ND83 568 aa27.39■■□□□ 1.98
LSM7-202ENST00000585395 SH2D4AQ9H788 454 aa27.39■■□□□ 1.98
LSM7-202ENST00000585395 LAMA3Q16787 3333 aa27.38■■□□□ 1.97
LSM7-202ENST00000585395 TNPO2O14787 897 aaKnown RBP27.38■■□□□ 1.97
LSM7-202ENST00000585395 FGAP02671 866 aa27.38■■□□□ 1.97
LSM7-202ENST00000585395 HOXA7P31268 230 aaPredicted RBP27.38■■□□□ 1.97
LSM7-202ENST00000585395 GUCY1A2P33402 732 aa27.38■■□□□ 1.97
LSM7-202ENST00000585395 SMIM22K7EJ46 135 aa27.37■■□□□ 1.97
LSM7-202ENST00000585395 EVI5O60447 810 aa27.37■■□□□ 1.97
LSM7-202ENST00000585395 C12orf42Q96LP6 360 aa27.37■■□□□ 1.97
LSM7-202ENST00000585395 USP17L15C9J2P7 530 aa27.36■■□□□ 1.97
LSM7-202ENST00000585395 USP17L13C9JLJ4 530 aa27.36■■□□□ 1.97
LSM7-202ENST00000585395 USP17L11C9JVI0 530 aa27.36■■□□□ 1.97
LSM7-202ENST00000585395 USP17L18D6R9N7 530 aa27.36■■□□□ 1.97
LSM7-202ENST00000585395 USP17L22D6RA61 530 aa27.36■■□□□ 1.97
LSM7-202ENST00000585395 USP17L17D6RBQ6 530 aa27.36■■□□□ 1.97
LSM7-202ENST00000585395 USP17L19D6RCP7 530 aa27.36■■□□□ 1.97
LSM7-202ENST00000585395 USP17L20D6RJB6 530 aa27.36■■□□□ 1.97
LSM7-202ENST00000585395 SGPL1O95470 568 aa27.36■■□□□ 1.97
LSM7-202ENST00000585395 HERVK_113P62684 666 aa27.36■■□□□ 1.97
LSM7-202ENST00000585395 PRKCZQ05513 592 aa27.36■■□□□ 1.97
LSM7-202ENST00000585395 USP17L24Q0WX57 530 aa27.36■■□□□ 1.97
LSM7-202ENST00000585395 CCAR1Q8IX12 1150 aaKnown RBP27.36■■□□□ 1.97
LSM7-202ENST00000585395 GTF3C2Q8WUA4 911 aaPredicted RBP27.36■■□□□ 1.97
LSM7-202ENST00000585395 COA7Q96BR5 231 aa27.36■■□□□ 1.97
LSM7-202ENST00000585395 P2RX7Q99572 595 aaKnown RBP27.36■■□□□ 1.97
LSM7-202ENST00000585395 ESYT1Q9BSJ8 1104 aa27.36■■□□□ 1.97
LSM7-202ENST00000585395 ANAPC4Q9UJX5 808 aa27.36■■□□□ 1.97
LSM7-202ENST00000585395 FOXP2O15409 715 aa27.35■■□□□ 1.97
LSM7-202ENST00000585395 PCP11498 1178 aaKnown RBP27.35■■□□□ 1.97
LSM7-202ENST00000585395 VCAM1P19320 739 aa27.35■■□□□ 1.97
LSM7-202ENST00000585395 MNX1P50219 401 aaPredicted RBP27.35■■□□□ 1.97
LSM7-202ENST00000585395 ZNF444Q8N0Y2 327 aaPredicted RBP27.35■■□□□ 1.97
LSM7-202ENST00000585395 PAGR1Q9BTK6 254 aa27.35■■□□□ 1.97
LSM7-202ENST00000585395 CWC22Q9HCG8 908 aaKnown RBP27.35■■□□□ 1.97
LSM7-202ENST00000585395 SOX1O00570 391 aaPredicted RBP27.34■■□□□ 1.97
LSM7-202ENST00000585395 ZNF213O14771 459 aa27.34■■□□□ 1.97
LSM7-202ENST00000585395 NT5C2P49902 561 aa27.34■■□□□ 1.97
LSM7-202ENST00000585395 IMMTQ16891 758 aaKnown RBP27.34■■□□□ 1.97
LSM7-202ENST00000585395 CLEC10AQ8IUN9 316 aa27.34■■□□□ 1.97
LSM7-202ENST00000585395 UNC93B1Q9H1C4 597 aa27.34■■□□□ 1.97
LSM7-202ENST00000585395 RNF41Q9H4P4 317 aaPredicted RBP27.34■■□□□ 1.97
LSM7-202ENST00000585395 RPAP3Q9H6T3 665 aaPredicted RBP27.34■■□□□ 1.97
LSM7-202ENST00000585395 U3KPZ7 1027 aaPredicted RBP27.34■■□□□ 1.97
LSM7-202ENST00000585395 RAD21O60216 631 aa27.33■■□□□ 1.97
LSM7-202ENST00000585395 TANGO6Q9C0B7 1094 aa27.33■■□□□ 1.97
LSM7-202ENST00000585395 KANSL2Q9H9L4 492 aa27.33■■□□□ 1.97
LSM7-202ENST00000585395 LRCH3Q96II8 777 aa27.32■■□□□ 1.96
LSM7-202ENST00000585395 EIF5BO60841 1220 aaKnown RBP27.31■■□□□ 1.96
LSM7-202ENST00000585395 PPP4R3BQ5MIZ7 849 aa27.31■■□□□ 1.96
LSM7-202ENST00000585395 GPR153Q6NV75 609 aa27.31■■□□□ 1.96
LSM7-202ENST00000585395 GPRC5AQ8NFJ5 357 aa27.31■■□□□ 1.96
LSM7-202ENST00000585395 A0A1W2PRG0 241 aa27.3■■□□□ 1.96
LSM7-202ENST00000585395 ADCY3O60266 1144 aa27.3■■□□□ 1.96
LSM7-202ENST00000585395 CATSPERGQ6ZRH7 1159 aa27.3■■□□□ 1.96
LSM7-202ENST00000585395 PXYLP1Q8TE99 480 aa27.3■■□□□ 1.96
LSM7-202ENST00000585395 GOPCQ9HD26 462 aa27.3■■□□□ 1.96
LSM7-202ENST00000585395 MORF4L1Q9UBU8 362 aa27.3■■□□□ 1.96
LSM7-202ENST00000585395 GABRQQ9UN88 632 aa27.3■■□□□ 1.96
LSM7-202ENST00000585395 GTF3C3Q9Y5Q9 886 aa27.3■■□□□ 1.96
LSM7-202ENST00000585395 PRDM1O75626 825 aa27.29■■□□□ 1.96
LSM7-202ENST00000585395 TFRCP02786 760 aaKnown RBP27.29■■□□□ 1.96
LSM7-202ENST00000585395 EEF2P13639 858 aaKnown RBP27.29■■□□□ 1.96
LSM7-202ENST00000585395 RASA1P20936 1047 aa27.29■■□□□ 1.96
LSM7-202ENST00000585395 CTDSPL2Q05D32 466 aa27.29■■□□□ 1.96
LSM7-202ENST00000585395 SAMD1Q6SPF0 538 aaPredicted RBP27.29■■□□□ 1.96
LSM7-202ENST00000585395 MFSD6Q6ZSS7 791 aa27.29■■□□□ 1.96
LSM7-202ENST00000585395 LPAR1Q92633 364 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms