RNA–Protein interactions for RNA: ENST00000584939.1

ITGB4-213, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-213ENST00000584939 TRIM32Q13049 653 aa20.53■□□□□ 0.88
ITGB4-213ENST00000584939 COG2Q14746 738 aa20.53■□□□□ 0.88
ITGB4-213ENST00000584939 MORN1Q5T089 497 aa20.53■□□□□ 0.88
ITGB4-213ENST00000584939 TRIB2Q92519 343 aa20.53■□□□□ 0.88
ITGB4-213ENST00000584939 LPAR1Q92633 364 aa20.53■□□□□ 0.88
ITGB4-213ENST00000584939 USP6NLQ92738 828 aa20.53■□□□□ 0.88
ITGB4-213ENST00000584939 GCC1Q96CN9 775 aa20.53■□□□□ 0.88
ITGB4-213ENST00000584939 FSD1Q9BTV5 496 aa20.53■□□□□ 0.88
ITGB4-213ENST00000584939 SH2D4AQ9H788 454 aa20.53■□□□□ 0.88
ITGB4-213ENST00000584939 KANSL2Q9H9L4 492 aa20.53■□□□□ 0.88
ITGB4-213ENST00000584939 HOXC10Q9NYD6 342 aa20.53■□□□□ 0.88
ITGB4-213ENST00000584939 DOCK3Q8IZD9 2030 aa20.53■□□□□ 0.88
ITGB4-213ENST00000584939 BAZ2AQ9UIF9 1905 aaKnown RBP20.53■□□□□ 0.88
ITGB4-213ENST00000584939 SALL3Q9BXA9 1300 aa20.53■□□□□ 0.88
ITGB4-213ENST00000584939 APPP05067 770 aa20.52■□□□□ 0.88
ITGB4-213ENST00000584939 EEF2P13639 858 aaKnown RBP20.52■□□□□ 0.88
ITGB4-213ENST00000584939 IRX6P78412 446 aaPredicted RBP20.52■□□□□ 0.88
ITGB4-213ENST00000584939 ATP2B2Q01814 1243 aa20.52■□□□□ 0.88
ITGB4-213ENST00000584939 WDR78Q5VTH9 848 aa20.52■□□□□ 0.88
ITGB4-213ENST00000584939 UBE2Q1Q7Z7E8 422 aa20.52■□□□□ 0.88
ITGB4-213ENST00000584939 SPICE1Q8N0Z3 855 aa20.52■□□□□ 0.88
ITGB4-213ENST00000584939 STK11IPQ8N1F8 1099 aa20.52■□□□□ 0.88
ITGB4-213ENST00000584939 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.52■□□□□ 0.88
ITGB4-213ENST00000584939 VCPKMTQ9H867 229 aa20.52■□□□□ 0.88
ITGB4-213ENST00000584939 PATL2C9JE40 543 aaKnown RBP20.51■□□□□ 0.87
ITGB4-213ENST00000584939 FARP2O94887 1054 aaPredicted RBP20.51■□□□□ 0.87
ITGB4-213ENST00000584939 CAPN2P17655 700 aa20.51■□□□□ 0.87
ITGB4-213ENST00000584939 RGS2P41220 211 aa20.51■□□□□ 0.87
ITGB4-213ENST00000584939 TDO2P48775 406 aa20.51■□□□□ 0.87
ITGB4-213ENST00000584939 TRMT44Q8IYL2 757 aaKnown RBP20.51■□□□□ 0.87
ITGB4-213ENST00000584939 SEC62Q99442 399 aaKnown RBP20.51■□□□□ 0.87
ITGB4-213ENST00000584939 MKNK2Q9HBH9 465 aa20.51■□□□□ 0.87
ITGB4-213ENST00000584939 EPB41L4AQ9HCS5 686 aaPredicted RBP20.51■□□□□ 0.87
ITGB4-213ENST00000584939 HMX1Q9NP08 348 aaPredicted RBP20.51■□□□□ 0.87
ITGB4-213ENST00000584939 RPTORQ8N122 1335 aa20.51■□□□□ 0.87
ITGB4-213ENST00000584939 BRCA2P51587 3418 aa20.5■□□□□ 0.87
ITGB4-213ENST00000584939 ZMYM1Q5SVZ6 1142 aa20.5■□□□□ 0.87
ITGB4-213ENST00000584939 CRISPLD2Q9H0B8 497 aa20.5■□□□□ 0.87
ITGB4-213ENST00000584939 ZKSCAN1P17029 563 aaPredicted RBP20.49■□□□□ 0.87
ITGB4-213ENST00000584939 RASA1P20936 1047 aa20.49■□□□□ 0.87
ITGB4-213ENST00000584939 MAP2K5Q13163 448 aa20.49■□□□□ 0.87
ITGB4-213ENST00000584939 SMC5Q8IY18 1101 aa20.49■□□□□ 0.87
ITGB4-213ENST00000584939 IFNL3Q8IZI9 196 aa20.49■□□□□ 0.87
ITGB4-213ENST00000584939 DPF3Q92784 378 aa20.49■□□□□ 0.87
ITGB4-213ENST00000584939 APBA2Q99767 749 aa20.49■□□□□ 0.87
ITGB4-213ENST00000584939 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.49■□□□□ 0.87
ITGB4-213ENST00000584939 STAP2Q9UGK3 403 aa20.49■□□□□ 0.87
ITGB4-213ENST00000584939 SLC15A5A6NIM6 579 aa20.48■□□□□ 0.87
ITGB4-213ENST00000584939 WDR46O15213 610 aaKnown RBP20.48■□□□□ 0.87
ITGB4-213ENST00000584939 FLOT1O75955 427 aa20.48■□□□□ 0.87
ITGB4-213ENST00000584939 PRKAR2AP13861 404 aaKnown RBP20.48■□□□□ 0.87
ITGB4-213ENST00000584939 PTPREP23469 700 aa20.48■□□□□ 0.87
ITGB4-213ENST00000584939 DSG3P32926 999 aa20.48■□□□□ 0.87
ITGB4-213ENST00000584939 CCL14Q16627 93 aa20.48■□□□□ 0.87
ITGB4-213ENST00000584939 MAP3K21Q5TCX8 1036 aa20.48■□□□□ 0.87
ITGB4-213ENST00000584939 HTATIP2Q9BUP3 242 aa20.48■□□□□ 0.87
ITGB4-213ENST00000584939 NACAP1Q9BZK3 213 aa20.48■□□□□ 0.87
ITGB4-213ENST00000584939 IVNS1ABPQ9Y6Y0 642 aa20.48■□□□□ 0.87
ITGB4-213ENST00000584939 MKI67P46013 3256 aaKnown RBP20.48■□□□□ 0.87
ITGB4-213ENST00000584939 PLXNB2O15031 1838 aa20.48■□□□□ 0.87
ITGB4-213ENST00000584939 ROBO3Q96MS0 1386 aa20.47■□□□□ 0.87
ITGB4-213ENST00000584939 PDE1AP54750 535 aa20.47■□□□□ 0.87
ITGB4-213ENST00000584939 SAMD1Q6SPF0 538 aaPredicted RBP20.47■□□□□ 0.87
ITGB4-213ENST00000584939 MB21D1Q8N884 522 aa20.47■□□□□ 0.87
ITGB4-213ENST00000584939 MOV10L1Q9BXT6 1211 aaKnown RBP20.47■□□□□ 0.87
ITGB4-213ENST00000584939 GOPCQ9HD26 462 aa20.47■□□□□ 0.87
ITGB4-213ENST00000584939 H0YGN5 161 aa20.46■□□□□ 0.87
ITGB4-213ENST00000584939 RAD21O60216 631 aa20.46■□□□□ 0.87
ITGB4-213ENST00000584939 CACNB2Q08289 660 aaPredicted RBP20.46■□□□□ 0.87
ITGB4-213ENST00000584939 ZNF444Q8N0Y2 327 aaPredicted RBP20.46■□□□□ 0.87
ITGB4-213ENST00000584939 EVI5LQ96CN4 794 aa20.46■□□□□ 0.87
ITGB4-213ENST00000584939 ATG4CQ96DT6 458 aa20.46■□□□□ 0.87
ITGB4-213ENST00000584939 SPATC1LQ9H0A9 340 aa20.46■□□□□ 0.87
ITGB4-213ENST00000584939 RWDD1Q9H446 243 aaPredicted RBP20.46■□□□□ 0.87
ITGB4-213ENST00000584939 ZNF287Q9HBT7 754 aa20.46■□□□□ 0.87
ITGB4-213ENST00000584939 PRDM1O75626 825 aa20.45■□□□□ 0.86
ITGB4-213ENST00000584939 SLC34A2O95436 690 aa20.45■□□□□ 0.86
ITGB4-213ENST00000584939 GRB14Q14449 540 aa20.45■□□□□ 0.86
ITGB4-213ENST00000584939 PLS1Q14651 629 aa20.45■□□□□ 0.86
ITGB4-213ENST00000584939 NAPBQ9H115 298 aa20.45■□□□□ 0.86
ITGB4-213ENST00000584939 NYAP2Q9P242 653 aa20.45■□□□□ 0.86
ITGB4-213ENST00000584939 ERCC3P19447 782 aa20.44■□□□□ 0.86
ITGB4-213ENST00000584939 CCDC129Q6ZRS4 1044 aa20.44■□□□□ 0.86
ITGB4-213ENST00000584939 SHCBP1Q8NEM2 672 aa20.44■□□□□ 0.86
ITGB4-213ENST00000584939 PAWRQ96IZ0 340 aaKnown RBP20.44■□□□□ 0.86
ITGB4-213ENST00000584939 LNPKQ9C0E8 428 aa20.44■□□□□ 0.86
ITGB4-213ENST00000584939 FBXO28Q9NVF7 368 aa20.44■□□□□ 0.86
ITGB4-213ENST00000584939 MYH8P13535 1937 aa20.44■□□□□ 0.86
ITGB4-213ENST00000584939 STRNO43815 780 aa20.43■□□□□ 0.86
ITGB4-213ENST00000584939 HOXC6P09630 235 aa20.43■□□□□ 0.86
ITGB4-213ENST00000584939 FAM83BQ5T0W9 1011 aa20.43■□□□□ 0.86
ITGB4-213ENST00000584939 MFSD14CQ5VZR4 134 aa20.43■□□□□ 0.86
ITGB4-213ENST00000584939 ANKLE1Q8NAG6 615 aa20.43■□□□□ 0.86
ITGB4-213ENST00000584939 DIS3LQ8TF46 1054 aaKnown RBP20.43■□□□□ 0.86
ITGB4-213ENST00000584939 FLRT1Q9NZU1 646 aa20.43■□□□□ 0.86
ITGB4-213ENST00000584939 CLIP2Q9UDT6 1046 aa20.43■□□□□ 0.86
ITGB4-213ENST00000584939 IGKV6D-41A0A0C4DH26 115 aa20.42■□□□□ 0.86
ITGB4-213ENST00000584939 SLC3A2P08195 630 aaKnown RBP20.42■□□□□ 0.86
ITGB4-213ENST00000584939 CCND3P30281 292 aaPredicted RBP20.42■□□□□ 0.86
ITGB4-213ENST00000584939 PDE4BQ07343 736 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms