RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 SOCS4Q8WXH5 440 aa21.39■■□□□ 1.01
ERBB2-221ENST00000584888 TRIB2Q92519 343 aa21.39■■□□□ 1.01
ERBB2-221ENST00000584888 HMX1Q9NP08 348 aaPredicted RBP21.39■■□□□ 1.01
ERBB2-221ENST00000584888 VCAM1P19320 739 aa21.38■■□□□ 1.01
ERBB2-221ENST00000584888 C16orf86Q6ZW13 317 aa21.38■■□□□ 1.01
ERBB2-221ENST00000584888 TICAM2Q86XR7 235 aa21.38■■□□□ 1.01
ERBB2-221ENST00000584888 PLEKHM2Q8IWE5 1019 aa21.38■■□□□ 1.01
ERBB2-221ENST00000584888 EVI5LQ96CN4 794 aa21.38■■□□□ 1.01
ERBB2-221ENST00000584888 SEC62Q99442 399 aaKnown RBP21.38■■□□□ 1.01
ERBB2-221ENST00000584888 FSD1Q9BTV5 496 aa21.38■■□□□ 1.01
ERBB2-221ENST00000584888 OSBPL3Q9H4L5 887 aa21.38■■□□□ 1.01
ERBB2-221ENST00000584888 RABGAP1Q9Y3P9 1069 aa21.38■■□□□ 1.01
ERBB2-221ENST00000584888 PLXNB2O15031 1838 aa21.37■■□□□ 1.01
ERBB2-221ENST00000584888 MPHOSPH10O00566 681 aaKnown RBP21.37■■□□□ 1.01
ERBB2-221ENST00000584888 CDK8P49336 464 aa21.37■■□□□ 1.01
ERBB2-221ENST00000584888 IRX6P78412 446 aaPredicted RBP21.37■■□□□ 1.01
ERBB2-221ENST00000584888 GPR142Q7Z601 462 aa21.37■■□□□ 1.01
ERBB2-221ENST00000584888 USP6NLQ92738 828 aa21.37■■□□□ 1.01
ERBB2-221ENST00000584888 CNMDO75829 334 aa21.36■■□□□ 1.01
ERBB2-221ENST00000584888 GNAT2P19087 354 aa21.36■■□□□ 1.01
ERBB2-221ENST00000584888 PLEKHH3Q7Z736 793 aa21.36■■□□□ 1.01
ERBB2-221ENST00000584888 DDRGK1Q96HY6 314 aa21.36■■□□□ 1.01
ERBB2-221ENST00000584888 PAWRQ96IZ0 340 aaKnown RBP21.36■■□□□ 1.01
ERBB2-221ENST00000584888 EPB41L4AQ9HCS5 686 aaPredicted RBP21.36■■□□□ 1.01
ERBB2-221ENST00000584888 A0A1W2PRG0 241 aa21.35■■□□□ 1.01
ERBB2-221ENST00000584888 PATL2C9JE40 543 aaKnown RBP21.35■■□□□ 1.01
ERBB2-221ENST00000584888 FXR1P51114 621 aaKnown RBP eCLIP21.35■■□□□ 1.01
ERBB2-221ENST00000584888 MORN1Q5T089 497 aa21.35■■□□□ 1.01
ERBB2-221ENST00000584888 MAP3K21Q5TCX8 1036 aa21.35■■□□□ 1.01
ERBB2-221ENST00000584888 CHRDL2Q6WN34 429 aa21.35■■□□□ 1.01
ERBB2-221ENST00000584888 LBX2Q6XYB7 198 aa21.35■■□□□ 1.01
ERBB2-221ENST00000584888 RPAP3Q9H6T3 665 aaPredicted RBP21.35■■□□□ 1.01
ERBB2-221ENST00000584888 ARPP21Q9UBL0 812 aaPredicted RBP21.35■■□□□ 1.01
ERBB2-221ENST00000584888 NR2E3Q9Y5X4 410 aa21.35■■□□□ 1.01
ERBB2-221ENST00000584888 PRKAR2AP13861 404 aaKnown RBP21.34■■□□□ 1.01
ERBB2-221ENST00000584888 CCNA1P78396 465 aa21.34■■□□□ 1.01
ERBB2-221ENST00000584888 SIAH1Q8IUQ4 282 aa21.34■■□□□ 1.01
ERBB2-221ENST00000584888 AMOTL1Q8IY63 956 aa21.34■■□□□ 1.01
ERBB2-221ENST00000584888 TRMT44Q8IYL2 757 aaKnown RBP21.34■■□□□ 1.01
ERBB2-221ENST00000584888 DIS3LQ8TF46 1054 aaKnown RBP21.34■■□□□ 1.01
ERBB2-221ENST00000584888 CCDC17Q96LX7 622 aa21.34■■□□□ 1.01
ERBB2-221ENST00000584888 FOXP2O15409 715 aa21.33■■□□□ 1.01
ERBB2-221ENST00000584888 AKR1B1P15121 316 aa21.33■■□□□ 1.01
ERBB2-221ENST00000584888 ZKSCAN1P17029 563 aaPredicted RBP21.33■■□□□ 1.01
ERBB2-221ENST00000584888 RGS2P41220 211 aa21.33■■□□□ 1.01
ERBB2-221ENST00000584888 TMEM179Q6ZVK1 233 aa21.33■■□□□ 1.01
ERBB2-221ENST00000584888 NECAB2Q7Z6G3 386 aa21.33■■□□□ 1.01
ERBB2-221ENST00000584888 IFNL3Q8IZI9 196 aa21.33■■□□□ 1.01
ERBB2-221ENST00000584888 ANKLE1Q8NAG6 615 aa21.33■■□□□ 1.01
ERBB2-221ENST00000584888 CWC22Q9HCG8 908 aaKnown RBP21.33■■□□□ 1.01
ERBB2-221ENST00000584888 BTBD7Q9P203 1132 aa21.33■■□□□ 1.01
ERBB2-221ENST00000584888 ROBO3Q96MS0 1386 aa21.33■■□□□ 1
ERBB2-221ENST00000584888 GREB1LQ9C091 1923 aaPredicted RBP21.33■■□□□ 1
ERBB2-221ENST00000584888 SPDYE16A6NNV3 312 aaPredicted RBP21.32■■□□□ 1
ERBB2-221ENST00000584888 EVI5O60447 810 aa21.32■■□□□ 1
ERBB2-221ENST00000584888 MAP2K5Q13163 448 aa21.32■■□□□ 1
ERBB2-221ENST00000584888 CCL14Q16627 93 aa21.32■■□□□ 1
ERBB2-221ENST00000584888 CACNB2Q08289 660 aaPredicted RBP21.31■■□□□ 1
ERBB2-221ENST00000584888 COG2Q14746 738 aa21.31■■□□□ 1
ERBB2-221ENST00000584888 WDR78Q5VTH9 848 aa21.31■■□□□ 1
ERBB2-221ENST00000584888 APBA2Q99767 749 aa21.31■■□□□ 1
ERBB2-221ENST00000584888 HELLSQ9NRZ9 838 aa21.31■■□□□ 1
ERBB2-221ENST00000584888 HOXC10Q9NYD6 342 aa21.31■■□□□ 1
ERBB2-221ENST00000584888 RBM27Q9P2N5 1060 aaKnown RBP21.31■■□□□ 1
ERBB2-221ENST00000584888 OGDHLQ9ULD0 1010 aa21.31■■□□□ 1
ERBB2-221ENST00000584888 TRIOBPQ9H2D6 2365 aa21.31■■□□□ 1
ERBB2-221ENST00000584888 PTPREP23469 700 aa21.3■■□□□ 1
ERBB2-221ENST00000584888 MNX1P50219 401 aaPredicted RBP21.3■■□□□ 1
ERBB2-221ENST00000584888 KIAA1755Q5JYT7 1200 aa21.3■■□□□ 1
ERBB2-221ENST00000584888 CLEC10AQ8IUN9 316 aa21.3■■□□□ 1
ERBB2-221ENST00000584888 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.3■■□□□ 1
ERBB2-221ENST00000584888 SLC15A5A6NIM6 579 aa21.29■■□□□ 1
ERBB2-221ENST00000584888 MINDY4BA8MYZ0 360 aa21.29■■□□□ 1
ERBB2-221ENST00000584888 RASA1P20936 1047 aa21.29■■□□□ 1
ERBB2-221ENST00000584888 PDE4AP27815 886 aa21.29■■□□□ 1
ERBB2-221ENST00000584888 CCDC129Q6ZRS4 1044 aa21.29■■□□□ 1
ERBB2-221ENST00000584888 TANGO6Q9C0B7 1094 aa21.29■■□□□ 1
ERBB2-221ENST00000584888 NBPF3Q9H094 633 aa21.29■■□□□ 1
ERBB2-221ENST00000584888 TMX2Q9Y320 296 aa21.29■■□□□ 1
ERBB2-221ENST00000584888 RLFQ13129 1914 aa21.28■■□□□ 1
ERBB2-221ENST00000584888 APPP05067 770 aa21.28■■□□□ 1
ERBB2-221ENST00000584888 CCND3P30281 292 aaPredicted RBP21.28■■□□□ 1
ERBB2-221ENST00000584888 TDO2P48775 406 aa21.28■■□□□ 1
ERBB2-221ENST00000584888 ICA1Q05084 483 aa21.28■■□□□ 1
ERBB2-221ENST00000584888 LPAR1Q92633 364 aa21.28■■□□□ 1
ERBB2-221ENST00000584888 FAM227BQ96M60 508 aa21.28■■□□□ 1
ERBB2-221ENST00000584888 PRO3102Q9H379 93 aa21.28■■□□□ 1
ERBB2-221ENST00000584888 ARHGEF10LQ9HCE6 1279 aa21.28■■□□□ 1
ERBB2-221ENST00000584888 IVNS1ABPQ9Y6Y0 642 aa21.28■■□□□ 1
ERBB2-221ENST00000584888 A0A0D9SFI3 127 aa21.27■■□□□ 1
ERBB2-221ENST00000584888 ALX1Q15699 326 aa21.27■■□□□ 1
ERBB2-221ENST00000584888 NACAP1Q9BZK3 213 aa21.27■■□□□ 1
ERBB2-221ENST00000584888 FLRT1Q9NZU1 646 aa21.27■■□□□ 1
ERBB2-221ENST00000584888 TRIM6-TRIM34B2RNG4 842 aa21.26■□□□□ 0.99
ERBB2-221ENST00000584888 HOXC6P09630 235 aa21.26■□□□□ 0.99
ERBB2-221ENST00000584888 GRB14Q14449 540 aa21.26■□□□□ 0.99
ERBB2-221ENST00000584888 MCMDC2Q4G0Z9 681 aa21.26■□□□□ 0.99
ERBB2-221ENST00000584888 VPS53Q5VIR6 699 aa21.26■□□□□ 0.99
ERBB2-221ENST00000584888 MFSD14CQ5VZR4 134 aa21.26■□□□□ 0.99
ERBB2-221ENST00000584888 LHX8Q68G74 356 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms