RNA–Protein interactions for RNA: ENST00000583775.1

PRKCA-205, Transcript of protein kinase C alpha, humanhuman

TSL 3

Gene PRKCA, Length 321 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-205ENST00000583775 TUBGCP6Q96RT7 1819 aa7.6□□□□□ -1.19
PRKCA-205ENST00000583775 GPR182O15218 404 aa7.6□□□□□ -1.19
PRKCA-205ENST00000583775 RNMTO43148 476 aaKnown RBP7.6□□□□□ -1.19
PRKCA-205ENST00000583775 GNAI3P08754 354 aa7.6□□□□□ -1.19
PRKCA-205ENST00000583775 MAPK8P45983 427 aa7.6□□□□□ -1.19
PRKCA-205ENST00000583775 TTC39BQ5VTQ0 682 aaPredicted RBP7.6□□□□□ -1.19
PRKCA-205ENST00000583775 USPL1Q5W0Q7 1092 aa7.6□□□□□ -1.19
PRKCA-205ENST00000583775 ZNF530Q6P9A1 599 aaPredicted RBP7.6□□□□□ -1.19
PRKCA-205ENST00000583775 GJD3Q8N144 294 aa7.6□□□□□ -1.19
PRKCA-205ENST00000583775 LTV1Q96GA3 475 aaPredicted RBP7.6□□□□□ -1.19
PRKCA-205ENST00000583775 SETDB2Q96T68 719 aa7.6□□□□□ -1.19
PRKCA-205ENST00000583775 SMG9Q9H0W8 520 aaKnown RBP7.6□□□□□ -1.19
PRKCA-205ENST00000583775 UPF2Q9HAU5 1272 aaKnown RBP7.6□□□□□ -1.19
PRKCA-205ENST00000583775 KANSL3Q9P2N6 904 aa7.6□□□□□ -1.19
PRKCA-205ENST00000583775 J3QW42 95 aa7.59□□□□□ -1.19
PRKCA-205ENST00000583775 COBLO75128 1261 aa7.59□□□□□ -1.19
PRKCA-205ENST00000583775 HMMRO75330 724 aa7.59□□□□□ -1.19
PRKCA-205ENST00000583775 NRLP54845 237 aa7.59□□□□□ -1.19
PRKCA-205ENST00000583775 GP2P55259 537 aaKnown RBP7.59□□□□□ -1.19
PRKCA-205ENST00000583775 PLCB3Q01970 1234 aa7.59□□□□□ -1.19
PRKCA-205ENST00000583775 TAGLNQ01995 201 aaKnown RBP7.59□□□□□ -1.19
PRKCA-205ENST00000583775 C1orf141Q5JVX7 400 aa7.59□□□□□ -1.19
PRKCA-205ENST00000583775 CEP85Q6P2H3 762 aa7.59□□□□□ -1.19
PRKCA-205ENST00000583775 G2E3Q7L622 706 aa7.59□□□□□ -1.19
PRKCA-205ENST00000583775 FOXD4L4Q8WXT5 416 aaPredicted RBP7.59□□□□□ -1.19
PRKCA-205ENST00000583775 NSUN5Q96P11 429 aaKnown RBP7.59□□□□□ -1.19
PRKCA-205ENST00000583775 MIS18AQ9NYP9 233 aa7.59□□□□□ -1.19
PRKCA-205ENST00000583775 WWC3Q9ULE0 1092 aa7.59□□□□□ -1.19
PRKCA-205ENST00000583775 TRPA1O75762 1119 aa7.58□□□□□ -1.2
PRKCA-205ENST00000583775 SPINK2P20155 84 aa7.58□□□□□ -1.2
PRKCA-205ENST00000583775 TEFQ10587 303 aa7.58□□□□□ -1.2
PRKCA-205ENST00000583775 SETDB1Q15047 1291 aa7.58□□□□□ -1.2
PRKCA-205ENST00000583775 COL13A1Q5TAT6 717 aaPredicted RBP7.58□□□□□ -1.2
PRKCA-205ENST00000583775 USHBP1Q8N6Y0 703 aa7.58□□□□□ -1.2
PRKCA-205ENST00000583775 LRRC59Q96AG4 307 aaKnown RBP7.58□□□□□ -1.2
PRKCA-205ENST00000583775 RBCK1Q9BYM8 510 aa7.58□□□□□ -1.2
PRKCA-205ENST00000583775 LGR6Q9HBX8 967 aa7.58□□□□□ -1.2
PRKCA-205ENST00000583775 USP35Q9P2H5 1018 aa7.58□□□□□ -1.2
PRKCA-205ENST00000583775 RAXQ9Y2V3 346 aa7.58□□□□□ -1.2
PRKCA-205ENST00000583775 EREGO14944 169 aa7.57□□□□□ -1.2
PRKCA-205ENST00000583775 TNFRSF21O75509 655 aa7.57□□□□□ -1.2
PRKCA-205ENST00000583775 EGFRP00533 1210 aa7.57□□□□□ -1.2
PRKCA-205ENST00000583775 TGFB1P01137 390 aa7.57□□□□□ -1.2
PRKCA-205ENST00000583775 IGLV1-40P01703 118 aa7.57□□□□□ -1.2
PRKCA-205ENST00000583775 GNAI2P04899 355 aa7.57□□□□□ -1.2
PRKCA-205ENST00000583775 USP5P45974 858 aa7.57□□□□□ -1.2
PRKCA-205ENST00000583775 RBM25P49756 843 aaKnown RBP7.57□□□□□ -1.2
PRKCA-205ENST00000583775 XPCQ01831 940 aaPredicted RBP7.57□□□□□ -1.2
PRKCA-205ENST00000583775 ANKRD45Q5TZF3 282 aa7.57□□□□□ -1.2
PRKCA-205ENST00000583775 DNAJC14Q6Y2X3 702 aaPredicted RBP7.57□□□□□ -1.2
PRKCA-205ENST00000583775 BRINP3Q76B58 766 aa7.57□□□□□ -1.2
PRKCA-205ENST00000583775 NPM2Q86SE8 214 aaKnown RBP7.57□□□□□ -1.2
PRKCA-205ENST00000583775 ZDHHC13Q8IUH4 622 aa7.57□□□□□ -1.2
PRKCA-205ENST00000583775 ZSCAN29Q8IWY8 852 aaPredicted RBP7.57□□□□□ -1.2
PRKCA-205ENST00000583775 UBL7Q96S82 380 aaPredicted RBP7.57□□□□□ -1.2
PRKCA-205ENST00000583775 FAM129BQ96TA1 746 aa7.57□□□□□ -1.2
PRKCA-205ENST00000583775 MEIS3Q99687 375 aa7.57□□□□□ -1.2
PRKCA-205ENST00000583775 LNPKQ9C0E8 428 aa7.57□□□□□ -1.2
PRKCA-205ENST00000583775 SRA1Q9HD15 236 aaKnown RBP7.57□□□□□ -1.2
PRKCA-205ENST00000583775 ABI2Q9NYB9 513 aaPredicted RBP7.57□□□□□ -1.2
PRKCA-205ENST00000583775 SPG7Q9UQ90 795 aa7.57□□□□□ -1.2
PRKCA-205ENST00000583775 LAMB4A4D0S4 1761 aa7.56□□□□□ -1.2
PRKCA-205ENST00000583775 TM4SF5O14894 197 aa7.56□□□□□ -1.2
PRKCA-205ENST00000583775 PHACTR2O75167 634 aa7.56□□□□□ -1.2
PRKCA-205ENST00000583775 IGHA2P01877 340 aa7.56□□□□□ -1.2
PRKCA-205ENST00000583775 HSP90AB1P08238 724 aaKnown RBP7.56□□□□□ -1.2
PRKCA-205ENST00000583775 HOXD8P13378 290 aaPredicted RBP7.56□□□□□ -1.2
PRKCA-205ENST00000583775 ACPPP15309 386 aa7.56□□□□□ -1.2
PRKCA-205ENST00000583775 CES1P23141 567 aa7.56□□□□□ -1.2
PRKCA-205ENST00000583775 HSPA2P54652 639 aa7.56□□□□□ -1.2
PRKCA-205ENST00000583775 ATP8B2P98198 1209 aa7.56□□□□□ -1.2
PRKCA-205ENST00000583775 EHHADHQ08426 723 aa7.56□□□□□ -1.2
PRKCA-205ENST00000583775 BECN1Q14457 450 aa7.56□□□□□ -1.2
PRKCA-205ENST00000583775 RAPGEF4Q8WZA2 1011 aa7.56□□□□□ -1.2
PRKCA-205ENST00000583775 ASB16Q96NS5 453 aa7.56□□□□□ -1.2
PRKCA-205ENST00000583775 RNF19AQ9NV58 838 aa7.56□□□□□ -1.2
PRKCA-205ENST00000583775 TLR7Q9NYK1 1049 aaKnown RBP7.56□□□□□ -1.2
PRKCA-205ENST00000583775 DBF4Q9UBU7 674 aaPredicted RBP7.56□□□□□ -1.2
PRKCA-205ENST00000583775 HDAC5Q9UQL6 1122 aa7.56□□□□□ -1.2
PRKCA-205ENST00000583775 UBR2Q8IWV8 1755 aa7.56□□□□□ -1.2
PRKCA-205ENST00000583775 KDM6AO15550 1401 aaPredicted RBP7.55□□□□□ -1.2
PRKCA-205ENST00000583775 C5P01031 1676 aa7.55□□□□□ -1.2
PRKCA-205ENST00000583775 GSC2O15499 205 aa7.55□□□□□ -1.2
PRKCA-205ENST00000583775 ALDH1L1O75891 902 aa7.55□□□□□ -1.2
PRKCA-205ENST00000583775 RPLP1P05386 114 aaKnown RBP7.55□□□□□ -1.2
PRKCA-205ENST00000583775 PSAPP07602 524 aa7.55□□□□□ -1.2
PRKCA-205ENST00000583775 PHKG2P15735 406 aa7.55□□□□□ -1.2
PRKCA-205ENST00000583775 ZC3H6P61129 1189 aaKnown RBP7.55□□□□□ -1.2
PRKCA-205ENST00000583775 FZD5Q13467 585 aa7.55□□□□□ -1.2
PRKCA-205ENST00000583775 PDE12Q6L8Q7 609 aaKnown RBP7.55□□□□□ -1.2
PRKCA-205ENST00000583775 IFNL2Q8IZJ0 200 aa7.55□□□□□ -1.2
PRKCA-205ENST00000583775 ARMC10Q8N2F6 343 aa7.55□□□□□ -1.2
PRKCA-205ENST00000583775 USP44Q9H0E7 712 aa7.55□□□□□ -1.2
PRKCA-205ENST00000583775 CHRDQ9H2X0 955 aa7.55□□□□□ -1.2
PRKCA-205ENST00000583775 ZFYVE28Q9HCC9 887 aa7.55□□□□□ -1.2
PRKCA-205ENST00000583775 HYPKQ9NX55 129 aa7.55□□□□□ -1.2
PRKCA-205ENST00000583775 MEGF6O75095 1541 aa7.55□□□□□ -1.2
PRKCA-205ENST00000583775 PAPPAQ13219 1627 aa7.55□□□□□ -1.2
PRKCA-205ENST00000583775 SHANK3Q9BYB0 1731 aa7.55□□□□□ -1.2
PRKCA-205ENST00000583775 COL22A1Q8NFW1 1626 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms