RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 JAKMIP1Q96N16 626 aaKnown RBP10.93□□□□□ -0.66
UBBP4-201ENST00000583708 FEZ1Q99689 392 aa10.93□□□□□ -0.66
UBBP4-201ENST00000583708 KAT14Q9H8E8 782 aa10.93□□□□□ -0.66
UBBP4-201ENST00000583708 HOXC10Q9NYD6 342 aa10.93□□□□□ -0.66
UBBP4-201ENST00000583708 PNMA3Q9UL41 463 aa10.93□□□□□ -0.66
UBBP4-201ENST00000583708 PNMA2Q9UL42 364 aa10.93□□□□□ -0.66
UBBP4-201ENST00000583708 STX8Q9UNK0 236 aa10.93□□□□□ -0.66
UBBP4-201ENST00000583708 FZD1Q9UP38 647 aa10.93□□□□□ -0.66
UBBP4-201ENST00000583708 TACC3Q9Y6A5 838 aa10.93□□□□□ -0.66
UBBP4-201ENST00000583708 LAMA4Q16363 1823 aa10.93□□□□□ -0.66
UBBP4-201ENST00000583708 MYPNQ86TC9 1320 aa10.92□□□□□ -0.66
UBBP4-201ENST00000583708 USP17L15C9J2P7 530 aa10.92□□□□□ -0.66
UBBP4-201ENST00000583708 USP17L13C9JLJ4 530 aa10.92□□□□□ -0.66
UBBP4-201ENST00000583708 USP17L11C9JVI0 530 aa10.92□□□□□ -0.66
UBBP4-201ENST00000583708 USP17L18D6R9N7 530 aa10.92□□□□□ -0.66
UBBP4-201ENST00000583708 USP17L22D6RA61 530 aa10.92□□□□□ -0.66
UBBP4-201ENST00000583708 USP17L17D6RBQ6 530 aa10.92□□□□□ -0.66
UBBP4-201ENST00000583708 USP17L19D6RCP7 530 aa10.92□□□□□ -0.66
UBBP4-201ENST00000583708 USP17L20D6RJB6 530 aa10.92□□□□□ -0.66
UBBP4-201ENST00000583708 F5H6K3 240 aa10.92□□□□□ -0.66
UBBP4-201ENST00000583708 SLURP2P0DP57 97 aa10.92□□□□□ -0.66
UBBP4-201ENST00000583708 SMARCA1P28370 1054 aa10.92□□□□□ -0.66
UBBP4-201ENST00000583708 VEGFBP49765 207 aa10.92□□□□□ -0.66
UBBP4-201ENST00000583708 KLRC3Q07444 240 aa10.92□□□□□ -0.66
UBBP4-201ENST00000583708 USP17L24Q0WX57 530 aa10.92□□□□□ -0.66
UBBP4-201ENST00000583708 WTAPQ15007 396 aa10.92□□□□□ -0.66
UBBP4-201ENST00000583708 TMEM67Q5HYA8 995 aa10.92□□□□□ -0.66
UBBP4-201ENST00000583708 GPATCH4Q5T3I0 446 aaKnown RBP10.92□□□□□ -0.66
UBBP4-201ENST00000583708 CYP4F22Q6NT55 531 aa10.92□□□□□ -0.66
UBBP4-201ENST00000583708 PAXIP1Q6ZW49 1069 aaPredicted RBP10.92□□□□□ -0.66
UBBP4-201ENST00000583708 CATIPQ7Z7H3 387 aa10.92□□□□□ -0.66
UBBP4-201ENST00000583708 STK11IPQ8N1F8 1099 aa10.92□□□□□ -0.66
UBBP4-201ENST00000583708 ENAHQ8N8S7 591 aaPredicted RBP10.92□□□□□ -0.66
UBBP4-201ENST00000583708 CHURC1Q8WUH1 139 aa10.92□□□□□ -0.66
UBBP4-201ENST00000583708 DCAF4Q8WV16 495 aa10.92□□□□□ -0.66
UBBP4-201ENST00000583708 TBC1D32Q96NH3 1257 aa10.92□□□□□ -0.66
UBBP4-201ENST00000583708 TMEM47Q9BQJ4 181 aa10.92□□□□□ -0.66
UBBP4-201ENST00000583708 CFHR5Q9BXR6 569 aa10.92□□□□□ -0.66
UBBP4-201ENST00000583708 AGXT2Q9BYV1 514 aa10.92□□□□□ -0.66
UBBP4-201ENST00000583708 INCENPQ9NQS7 918 aa10.92□□□□□ -0.66
UBBP4-201ENST00000583708 AGTPBP1Q9UPW5 1226 aa10.92□□□□□ -0.66
UBBP4-201ENST00000583708 TNKSO95271 1327 aa10.91□□□□□ -0.66
UBBP4-201ENST00000583708 CCL15-CCL14A0A0B4J2E2 113 aa10.91□□□□□ -0.66
UBBP4-201ENST00000583708 TRIM75PA6NK02 468 aa10.91□□□□□ -0.66
UBBP4-201ENST00000583708 DDAH1O94760 285 aa10.91□□□□□ -0.66
UBBP4-201ENST00000583708 CASTP20810 708 aaKnown RBP10.91□□□□□ -0.66
UBBP4-201ENST00000583708 OSBPP22059 807 aa10.91□□□□□ -0.66
UBBP4-201ENST00000583708 KIF5BP33176 963 aa10.91□□□□□ -0.66
UBBP4-201ENST00000583708 GJA5P36382 358 aa10.91□□□□□ -0.66
UBBP4-201ENST00000583708 GNAQP50148 359 aa10.91□□□□□ -0.66
UBBP4-201ENST00000583708 EVCP57679 992 aa10.91□□□□□ -0.66
UBBP4-201ENST00000583708 FGD1P98174 961 aa10.91□□□□□ -0.66
UBBP4-201ENST00000583708 ATP2B2Q01814 1243 aa10.91□□□□□ -0.66
UBBP4-201ENST00000583708 KIF23Q02241 960 aaPredicted RBP10.91□□□□□ -0.66
UBBP4-201ENST00000583708 TRAF1Q13077 416 aa10.91□□□□□ -0.66
UBBP4-201ENST00000583708 RABEP1Q15276 862 aa10.91□□□□□ -0.66
UBBP4-201ENST00000583708 CCL15Q16663 113 aa10.91□□□□□ -0.66
UBBP4-201ENST00000583708 CYB5R4Q7L1T6 521 aa10.91□□□□□ -0.66
UBBP4-201ENST00000583708 FAM160B2Q86V87 743 aa10.91□□□□□ -0.66
UBBP4-201ENST00000583708 DNAJC5GQ8N7S2 189 aa10.91□□□□□ -0.66
UBBP4-201ENST00000583708 PNMA1Q8ND90 353 aa10.91□□□□□ -0.66
UBBP4-201ENST00000583708 ACER1Q8TDN7 264 aa10.91□□□□□ -0.66
UBBP4-201ENST00000583708 LZTS2Q9BRK4 669 aa10.91□□□□□ -0.66
UBBP4-201ENST00000583708 EMILIN3Q9NT22 766 aa10.91□□□□□ -0.66
UBBP4-201ENST00000583708 SAGE1Q9NXZ1 904 aa10.91□□□□□ -0.66
UBBP4-201ENST00000583708 DOCK1Q14185 1865 aa10.91□□□□□ -0.66
UBBP4-201ENST00000583708 CCDC196A0A1B0GTZ2 297 aa10.9□□□□□ -0.66
UBBP4-201ENST00000583708 A0A1W2PRG0 241 aa10.9□□□□□ -0.66
UBBP4-201ENST00000583708 CCDC69A6NI79 296 aa10.9□□□□□ -0.66
UBBP4-201ENST00000583708 SH2B2O14492 632 aaPredicted RBP10.9□□□□□ -0.66
UBBP4-201ENST00000583708 SNHG28P0DPA3 235 aa10.9□□□□□ -0.66
UBBP4-201ENST00000583708 GCLCP48506 637 aaPredicted RBP10.9□□□□□ -0.66
UBBP4-201ENST00000583708 MCM2P49736 904 aa10.9□□□□□ -0.66
UBBP4-201ENST00000583708 HMGCS2P54868 508 aa10.9□□□□□ -0.66
UBBP4-201ENST00000583708 ANTXR2P58335 489 aa10.9□□□□□ -0.66
UBBP4-201ENST00000583708 MTMR2Q13614 643 aa10.9□□□□□ -0.66
UBBP4-201ENST00000583708 MOGSQ13724 837 aa10.9□□□□□ -0.66
UBBP4-201ENST00000583708 COG2Q14746 738 aa10.9□□□□□ -0.66
UBBP4-201ENST00000583708 ADCK5Q3MIX3 580 aa10.9□□□□□ -0.66
UBBP4-201ENST00000583708 ASPRV1Q53RT3 343 aa10.9□□□□□ -0.66
UBBP4-201ENST00000583708 NOM1Q5C9Z4 860 aaKnown RBP10.9□□□□□ -0.66
UBBP4-201ENST00000583708 SLFN13Q68D06 897 aa10.9□□□□□ -0.66
UBBP4-201ENST00000583708 LBX2Q6XYB7 198 aa10.9□□□□□ -0.66
UBBP4-201ENST00000583708 IFNL1Q8IU54 200 aa10.9□□□□□ -0.66
UBBP4-201ENST00000583708 MB21D1Q8N884 522 aa10.9□□□□□ -0.66
UBBP4-201ENST00000583708 BRI3BPQ8WY22 251 aa10.9□□□□□ -0.66
UBBP4-201ENST00000583708 MAF1Q9H063 256 aa10.9□□□□□ -0.66
UBBP4-201ENST00000583708 LY9Q9HBG7 655 aa10.9□□□□□ -0.66
UBBP4-201ENST00000583708 FEM1BQ9UK73 627 aa10.9□□□□□ -0.66
UBBP4-201ENST00000583708 TAF6LQ9Y6J9 622 aa10.9□□□□□ -0.66
UBBP4-201ENST00000583708 NDUFB10O96000 172 aa10.89□□□□□ -0.67
UBBP4-201ENST00000583708 BMP3P12645 472 aa10.89□□□□□ -0.67
UBBP4-201ENST00000583708 SLC1A4P43007 532 aa10.89□□□□□ -0.67
UBBP4-201ENST00000583708 GPAT2Q6NUI2 795 aa10.89□□□□□ -0.67
UBBP4-201ENST00000583708 BTNL9Q6UXG8 535 aa10.89□□□□□ -0.67
UBBP4-201ENST00000583708 NFXL1Q6ZNB6 911 aa10.89□□□□□ -0.67
UBBP4-201ENST00000583708 CATSPERGQ6ZRH7 1159 aa10.89□□□□□ -0.67
UBBP4-201ENST00000583708 PRPF38AQ8NAV1 312 aaKnown RBP10.89□□□□□ -0.67
UBBP4-201ENST00000583708 CNKSR2Q8WXI2 1034 aa10.89□□□□□ -0.67
UBBP4-201ENST00000583708 ZNF274Q96GC6 653 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms