RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	CD8B	P10966	210 aa		5.05	□□□□□ -1.6
MSI2-215	ENST00000582453	ANGEL2	Q5VTE6	544 aa	Known RBP	5.05	□□□□□ -1.6
MSI2-215	ENST00000582453	ZNF574	Q6ZN55	896 aa	Predicted RBP	5.05	□□□□□ -1.6
MSI2-215	ENST00000582453	ABI1	Q8IZP0	508 aa		5.05	□□□□□ -1.6
MSI2-215	ENST00000582453	ATG4C	Q96DT6	458 aa		5.05	□□□□□ -1.6
MSI2-215	ENST00000582453		Q96M66	194 aa		5.05	□□□□□ -1.6
MSI2-215	ENST00000582453	HSPA12B	Q96MM6	686 aa		5.05	□□□□□ -1.6
MSI2-215	ENST00000582453	KREMEN1	Q96MU8	473 aa		5.05	□□□□□ -1.6
MSI2-215	ENST00000582453	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	5.05	□□□□□ -1.6	3e-8	■□□□□ 10.6
MSI2-215	ENST00000582453	CCSER2	Q9H7U1	834 aa		5.05	□□□□□ -1.6
MSI2-215	ENST00000582453	SEMA3G	Q9NS98	782 aa		5.05	□□□□□ -1.6
MSI2-215	ENST00000582453	KCNH3	Q9ULD8	1083 aa		5.05	□□□□□ -1.6
MSI2-215	ENST00000582453	CCDC88B	A6NC98	1476 aa		5.05	□□□□□ -1.6
MSI2-215	ENST00000582453	UBOX5	O94941	541 aa		5.04	□□□□□ -1.6
MSI2-215	ENST00000582453	NME1	P15531	152 aa	Known RBP	5.04	□□□□□ -1.6
MSI2-215	ENST00000582453	FUT4	P22083	530 aa		5.04	□□□□□ -1.6
MSI2-215	ENST00000582453	SOX9	P48436	509 aa		5.04	□□□□□ -1.6
MSI2-215	ENST00000582453	CHMP4BP1	P59074	171 aa		5.04	□□□□□ -1.6
MSI2-215	ENST00000582453	CDKAL1	Q5VV42	579 aa		5.04	□□□□□ -1.6
MSI2-215	ENST00000582453	INTS3	Q68E01	1043 aa	Known RBP	5.04	□□□□□ -1.6
MSI2-215	ENST00000582453	DTWD2	Q8NBA8	298 aa		5.04	□□□□□ -1.6
MSI2-215	ENST00000582453	RBBP8NL	Q8NC74	664 aa	Predicted RBP	5.04	□□□□□ -1.6
MSI2-215	ENST00000582453	ANTXR1	Q9H6X2	564 aa		5.04	□□□□□ -1.6
MSI2-215	ENST00000582453	GINM1	Q9NU53	330 aa		5.04	□□□□□ -1.6
MSI2-215	ENST00000582453	PDS5B	Q9NTI5	1447 aa		5.04	□□□□□ -1.6
MSI2-215	ENST00000582453		H3BS24	57 aa		5.03	□□□□□ -1.6
MSI2-215	ENST00000582453	ERCC5	P28715	1186 aa	Predicted RBP	5.03	□□□□□ -1.6
MSI2-215	ENST00000582453	CD96	P40200	585 aa		5.03	□□□□□ -1.6
MSI2-215	ENST00000582453	IRAK1	P51617	712 aa		5.03	□□□□□ -1.6
MSI2-215	ENST00000582453	RNF4	P78317	190 aa		5.03	□□□□□ -1.6
MSI2-215	ENST00000582453	IKZF1	Q13422	519 aa		5.03	□□□□□ -1.6
MSI2-215	ENST00000582453	PLCL1	Q15111	1095 aa		5.03	□□□□□ -1.6
MSI2-215	ENST00000582453	TAB3	Q8N5C8	712 aa	Predicted RBP	5.03	□□□□□ -1.6
MSI2-215	ENST00000582453	VWCE	Q96DN2	955 aa		5.03	□□□□□ -1.6
MSI2-215	ENST00000582453	TM9SF2	Q99805	663 aa		5.03	□□□□□ -1.6
MSI2-215	ENST00000582453	GPR62	Q9BZJ7	368 aa		5.03	□□□□□ -1.6
MSI2-215	ENST00000582453	TRIT1	Q9H3H1	467 aa	Known RBP	5.03	□□□□□ -1.6
MSI2-215	ENST00000582453	ACBD3	Q9H3P7	528 aa		5.03	□□□□□ -1.6
MSI2-215	ENST00000582453	LMCD1	Q9NZU5	365 aa		5.03	□□□□□ -1.6
MSI2-215	ENST00000582453	ADGRE2	Q9UHX3	823 aa		5.03	□□□□□ -1.6
MSI2-215	ENST00000582453	PPT2	Q9UMR5	302 aa		5.03	□□□□□ -1.6
MSI2-215	ENST00000582453	EFR3B	Q9Y2G0	817 aa		5.03	□□□□□ -1.6
MSI2-215	ENST00000582453	INPP5F	Q9Y2H2	1132 aa		5.03	□□□□□ -1.6
MSI2-215	ENST00000582453	CLEC3A	O75596	197 aa		5.02	□□□□□ -1.61
MSI2-215	ENST00000582453	SRF	P11831	508 aa		5.02	□□□□□ -1.61
MSI2-215	ENST00000582453	POLR2B	P30876	1174 aa	Known RBP	5.02	□□□□□ -1.61
MSI2-215	ENST00000582453	FBXW10	Q5XX13	1052 aa		5.02	□□□□□ -1.61
MSI2-215	ENST00000582453	SLC23A3	Q6PIS1	610 aa		5.02	□□□□□ -1.61
MSI2-215	ENST00000582453	CBLL1	Q75N03	491 aa		5.02	□□□□□ -1.61
MSI2-215	ENST00000582453	TMPRSS7	Q7RTY8	843 aa		5.02	□□□□□ -1.61
MSI2-215	ENST00000582453	SEC16B	Q96JE7	1060 aa		5.02	□□□□□ -1.61
MSI2-215	ENST00000582453	ATP13A1	Q9HD20	1204 aa		5.02	□□□□□ -1.61
MSI2-215	ENST00000582453	GPATCH2	Q9NW75	528 aa		5.02	□□□□□ -1.61
MSI2-215	ENST00000582453	ZSWIM5	Q9P217	1185 aa		5.02	□□□□□ -1.61
MSI2-215	ENST00000582453	ZP2	Q05996	745 aa		5.01	□□□□□ -1.61
MSI2-215	ENST00000582453	ZNF792	Q3KQV3	632 aa		5.01	□□□□□ -1.61
MSI2-215	ENST00000582453	NBPF12	Q5TAG4	269 aa	Predicted RBP	5.01	□□□□□ -1.61
MSI2-215	ENST00000582453	PI4K2B	Q8TCG2	481 aa		5.01	□□□□□ -1.61
MSI2-215	ENST00000582453	UBE2F	Q969M7	185 aa		5.01	□□□□□ -1.61
MSI2-215	ENST00000582453	DHRS1	Q96LJ7	313 aa		5.01	□□□□□ -1.61
MSI2-215	ENST00000582453	CRBN	Q96SW2	442 aa		5.01	□□□□□ -1.61
MSI2-215	ENST00000582453	SLC9A7	Q96T83	725 aa		5.01	□□□□□ -1.61
MSI2-215	ENST00000582453	DUSP15	Q9H1R2	295 aa	Predicted RBP	5.01	□□□□□ -1.61
MSI2-215	ENST00000582453	LRRN2	O75325	713 aa		5	□□□□□ -1.61
MSI2-215	ENST00000582453	ACR	P10323	421 aa		5	□□□□□ -1.61
MSI2-215	ENST00000582453	GUCY2C	P25092	1073 aa		5	□□□□□ -1.61
MSI2-215	ENST00000582453	GIPR	P48546	466 aa		5	□□□□□ -1.61
MSI2-215	ENST00000582453	NASP	P49321	788 aa	Predicted RBP	5	□□□□□ -1.61
MSI2-215	ENST00000582453	EIF6	P56537	245 aa	Known RBP	5	□□□□□ -1.61
MSI2-215	ENST00000582453	GNL2	Q13823	731 aa	Known RBP	5	□□□□□ -1.61
MSI2-215	ENST00000582453	GAB4	Q2WGN9	574 aa		5	□□□□□ -1.61
MSI2-215	ENST00000582453	CCDC81	Q6ZN84	652 aa		5	□□□□□ -1.61
MSI2-215	ENST00000582453	LSR	Q86X29	649 aa	Predicted RBP	5	□□□□□ -1.61
MSI2-215	ENST00000582453	OR6P1	Q8NGX9	317 aa		5	□□□□□ -1.61
MSI2-215	ENST00000582453	SLC6A18	Q96N87	628 aa		5	□□□□□ -1.61
MSI2-215	ENST00000582453	SRRT	Q9BXP5	876 aa	Known RBP	5	□□□□□ -1.61
MSI2-215	ENST00000582453	ASCC2	Q9H1I8	757 aa	Predicted RBP	5	□□□□□ -1.61
MSI2-215	ENST00000582453	MBNL3	Q9NUK0	354 aa	Known RBP	5	□□□□□ -1.61
MSI2-215	ENST00000582453	STRIP2	Q9ULQ0	834 aa		5	□□□□□ -1.61
MSI2-215	ENST00000582453	NES	P48681	1621 aa		4.99	□□□□□ -1.61
MSI2-215	ENST00000582453	RBAK-RBAKDN	I3L0D1	243 aa		4.99	□□□□□ -1.61
MSI2-215	ENST00000582453	RNASE1	P07998	156 aa	Known RBP	4.99	□□□□□ -1.61
MSI2-215	ENST00000582453	ATF4	P18848	351 aa	Predicted RBP	4.99	□□□□□ -1.61
MSI2-215	ENST00000582453	TPP2	P29144	1249 aa	Predicted RBP	4.99	□□□□□ -1.61
MSI2-215	ENST00000582453	NBPF9	Q3BBW0	867 aa		4.99	□□□□□ -1.61
MSI2-215	ENST00000582453	TSPYL5	Q86VY4	417 aa	Predicted RBP	4.99	□□□□□ -1.61
MSI2-215	ENST00000582453	TMEM192	Q8IY95	271 aa		4.99	□□□□□ -1.61
MSI2-215	ENST00000582453	ENOX1	Q8TC92	643 aa	Known RBP	4.99	□□□□□ -1.61
MSI2-215	ENST00000582453	CARS2	Q9HA77	564 aa	Known RBP	4.99	□□□□□ -1.61
MSI2-215	ENST00000582453	CAPN10	Q9HC96	672 aa		4.99	□□□□□ -1.61
MSI2-215	ENST00000582453	ADAMTS6	Q9UKP5	1117 aa		4.99	□□□□□ -1.61
MSI2-215	ENST00000582453	ESR1	P03372	595 aa		4.98	□□□□□ -1.61
MSI2-215	ENST00000582453	NMI	Q13287	307 aa	Predicted RBP	4.98	□□□□□ -1.61
MSI2-215	ENST00000582453	CLEC16A	Q2KHT3	1053 aa		4.98	□□□□□ -1.61
MSI2-215	ENST00000582453	MCTP1	Q6DN14	999 aa		4.98	□□□□□ -1.61
MSI2-215	ENST00000582453	VPS37D	Q86XT2	251 aa		4.98	□□□□□ -1.61
MSI2-215	ENST00000582453	C19orf47	Q8N9M1	422 aa	Known RBP	4.98	□□□□□ -1.61
MSI2-215	ENST00000582453	SYTL5	Q8TDW5	730 aa	Predicted RBP	4.98	□□□□□ -1.61
MSI2-215	ENST00000582453	CPLX3	Q8WVH0	158 aa		4.98	□□□□□ -1.61
MSI2-215	ENST00000582453	SMARCC1	Q92922	1105 aa	Predicted RBP	4.98	□□□□□ -1.61

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