RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 ASCC2Q9H1I8 757 aaPredicted RBP19.41■□□□□ 0.7
RNF43-206ENST00000582293 ZFYVE28Q9HCC9 887 aa19.41■□□□□ 0.7
RNF43-206ENST00000582293 TCP11L1Q9NUJ3 509 aa19.41■□□□□ 0.7
RNF43-206ENST00000582293 E7EWF7 191 aa19.4■□□□□ 0.7
RNF43-206ENST00000582293 KDM4AO75164 1064 aa19.4■□□□□ 0.7
RNF43-206ENST00000582293 TTLL1O95922 423 aa19.4■□□□□ 0.7
RNF43-206ENST00000582293 CREB3L3Q68CJ9 461 aa19.4■□□□□ 0.7
RNF43-206ENST00000582293 SPICE1Q8N0Z3 855 aa19.4■□□□□ 0.7
RNF43-206ENST00000582293 LRRC47Q8N1G4 583 aaKnown RBP19.4■□□□□ 0.7
RNF43-206ENST00000582293 ZNF296Q8WUU4 475 aaPredicted RBP19.4■□□□□ 0.7
RNF43-206ENST00000582293 PARK7Q99497 189 aaKnown RBP19.4■□□□□ 0.7
RNF43-206ENST00000582293 ZSWIM5Q9P217 1185 aa19.4■□□□□ 0.7
RNF43-206ENST00000582293 ZSWIM8A7E2V4 1837 aa19.39■□□□□ 0.7
RNF43-206ENST00000582293 PARP14Q460N5 1801 aa19.39■□□□□ 0.7
RNF43-206ENST00000582293 BCRP11274 1271 aa19.39■□□□□ 0.69
RNF43-206ENST00000582293 CATSPERGQ6ZRH7 1159 aa19.39■□□□□ 0.69
RNF43-206ENST00000582293 CYB5R4Q7L1T6 521 aa19.39■□□□□ 0.69
RNF43-206ENST00000582293 ESR2Q92731 530 aa19.39■□□□□ 0.69
RNF43-206ENST00000582293 P2RX7Q99572 595 aaKnown RBP19.39■□□□□ 0.69
RNF43-206ENST00000582293 ZKSCAN3Q9BRR0 538 aa19.39■□□□□ 0.69
RNF43-206ENST00000582293 RPAP3Q9H6T3 665 aaPredicted RBP19.39■□□□□ 0.69
RNF43-206ENST00000582293 SH2D4AQ9H788 454 aa19.39■□□□□ 0.69
RNF43-206ENST00000582293 PRDM10Q9NQV6 1147 aa19.39■□□□□ 0.69
RNF43-206ENST00000582293 CPA4Q9UI42 421 aa19.39■□□□□ 0.69
RNF43-206ENST00000582293 CASP8AP2Q9UKL3 1982 aa19.39■□□□□ 0.69
RNF43-206ENST00000582293 F5H6K3 240 aa19.38■□□□□ 0.69
RNF43-206ENST00000582293 PEX10O60683 326 aa19.38■□□□□ 0.69
RNF43-206ENST00000582293 NDUFB10O96000 172 aa19.38■□□□□ 0.69
RNF43-206ENST00000582293 KLRC3Q07444 240 aa19.38■□□□□ 0.69
RNF43-206ENST00000582293 RASGRP2Q7LDG7 609 aa19.38■□□□□ 0.69
RNF43-206ENST00000582293 LPAR1Q92633 364 aa19.38■□□□□ 0.69
RNF43-206ENST00000582293 SYNPO2Q9UMS6 1093 aa19.38■□□□□ 0.69
RNF43-206ENST00000582293 USP17L15C9J2P7 530 aa19.37■□□□□ 0.69
RNF43-206ENST00000582293 USP17L13C9JLJ4 530 aa19.37■□□□□ 0.69
RNF43-206ENST00000582293 USP17L11C9JVI0 530 aa19.37■□□□□ 0.69
RNF43-206ENST00000582293 USP17L18D6R9N7 530 aa19.37■□□□□ 0.69
RNF43-206ENST00000582293 USP17L22D6RA61 530 aa19.37■□□□□ 0.69
RNF43-206ENST00000582293 USP17L17D6RBQ6 530 aa19.37■□□□□ 0.69
RNF43-206ENST00000582293 USP17L19D6RCP7 530 aa19.37■□□□□ 0.69
RNF43-206ENST00000582293 USP17L20D6RJB6 530 aa19.37■□□□□ 0.69
RNF43-206ENST00000582293 USP17L24Q0WX57 530 aa19.37■□□□□ 0.69
RNF43-206ENST00000582293 PABPC4Q13310 644 aaKnown RBP eCLIP19.37■□□□□ 0.69
RNF43-206ENST00000582293 RASEFQ8IZ41 740 aa19.37■□□□□ 0.69
RNF43-206ENST00000582293 GMCL1P1Q8NEA9 526 aa19.37■□□□□ 0.69
RNF43-206ENST00000582293 NUP88Q99567 741 aaPredicted RBP19.37■□□□□ 0.69
RNF43-206ENST00000582293 KRT23Q9C075 422 aa19.37■□□□□ 0.69
RNF43-206ENST00000582293 CNNM2Q9H8M5 875 aa19.37■□□□□ 0.69
RNF43-206ENST00000582293 PNMA3Q9UL41 463 aa19.37■□□□□ 0.69
RNF43-206ENST00000582293 STX8Q9UNK0 236 aa19.37■□□□□ 0.69
RNF43-206ENST00000582293 A0A0G2JMZ2 1700 aa19.37■□□□□ 0.69
RNF43-206ENST00000582293 WDR46O15213 610 aaKnown RBP19.36■□□□□ 0.69
RNF43-206ENST00000582293 OSBPP22059 807 aa19.36■□□□□ 0.69
RNF43-206ENST00000582293 CTGFP29279 349 aa19.36■□□□□ 0.69
RNF43-206ENST00000582293 NT5C2P49902 561 aa19.36■□□□□ 0.69
RNF43-206ENST00000582293 ANTXR2P58335 489 aa19.36■□□□□ 0.69
RNF43-206ENST00000582293 HERVK_113P62684 666 aa19.36■□□□□ 0.69
RNF43-206ENST00000582293 MB21D2Q8IYB1 491 aaPredicted RBP19.36■□□□□ 0.69
RNF43-206ENST00000582293 KCNB2Q92953 911 aa19.36■□□□□ 0.69
RNF43-206ENST00000582293 TMEM47Q9BQJ4 181 aa19.36■□□□□ 0.69
RNF43-206ENST00000582293 TXNRD2Q9NNW7 524 aa19.36■□□□□ 0.69
RNF43-206ENST00000582293 FKTNO75072 461 aa19.35■□□□□ 0.69
RNF43-206ENST00000582293 IRX3P78415 501 aaPredicted RBP19.35■□□□□ 0.69
RNF43-206ENST00000582293 SEC23AQ15436 765 aa19.35■□□□□ 0.69
RNF43-206ENST00000582293 FAM83BQ5T0W9 1011 aa19.35■□□□□ 0.69
RNF43-206ENST00000582293 GOPCQ9HD26 462 aa19.35■□□□□ 0.69
RNF43-206ENST00000582293 RBPJLQ9UBG7 517 aa19.35■□□□□ 0.69
RNF43-206ENST00000582293 SPDYE16A6NNV3 312 aaPredicted RBP19.34■□□□□ 0.69
RNF43-206ENST00000582293 CNMDO75829 334 aa19.34■□□□□ 0.69
RNF43-206ENST00000582293 HSPA4P34932 840 aa19.34■□□□□ 0.69
RNF43-206ENST00000582293 SP3Q02447 781 aa19.34■□□□□ 0.69
RNF43-206ENST00000582293 TSGA10IPQ3SY00 556 aa19.34■□□□□ 0.69
RNF43-206ENST00000582293 COL13A1Q5TAT6 717 aaPredicted RBP19.34■□□□□ 0.69
RNF43-206ENST00000582293 SLFN13Q68D06 897 aa19.34■□□□□ 0.69
RNF43-206ENST00000582293 ANKRD13CQ8N6S4 541 aa19.34■□□□□ 0.69
RNF43-206ENST00000582293 ENAHQ8N8S7 591 aaPredicted RBP19.34■□□□□ 0.69
RNF43-206ENST00000582293 SMCR8Q8TEV9 937 aaPredicted RBP19.34■□□□□ 0.69
RNF43-206ENST00000582293 ANKS1AQ92625 1134 aa19.34■□□□□ 0.69
RNF43-206ENST00000582293 ZSCAN10Q96SZ4 725 aaPredicted RBP19.34■□□□□ 0.69
RNF43-206ENST00000582293 ARHGAP39Q9C0H5 1083 aa19.34■□□□□ 0.69
RNF43-206ENST00000582293 FBXO28Q9NVF7 368 aa19.34■□□□□ 0.69
RNF43-206ENST00000582293 TNKSO95271 1327 aa19.33■□□□□ 0.69
RNF43-206ENST00000582293 ADCK5Q3MIX3 580 aa19.33■□□□□ 0.68
RNF43-206ENST00000582293 LBX2Q6XYB7 198 aa19.33■□□□□ 0.68
RNF43-206ENST00000582293 CHST3Q7LGC8 479 aa19.33■□□□□ 0.68
RNF43-206ENST00000582293 DGKHQ86XP1 1220 aa19.33■□□□□ 0.68
RNF43-206ENST00000582293 NCOA7Q8NI08 942 aa19.33■□□□□ 0.68
RNF43-206ENST00000582293 CD99L2Q8TCZ2 262 aa19.33■□□□□ 0.68
RNF43-206ENST00000582293 TTC14Q96N46 770 aa19.33■□□□□ 0.68
RNF43-206ENST00000582293 USP26Q9BXU7 913 aa19.33■□□□□ 0.68
RNF43-206ENST00000582293 TANGO6Q9C0B7 1094 aa19.33■□□□□ 0.68
RNF43-206ENST00000582293 SENP2Q9HC62 589 aa19.33■□□□□ 0.68
RNF43-206ENST00000582293 MORF4L1Q9UBU8 362 aa19.33■□□□□ 0.68
RNF43-206ENST00000582293 RAD21O60216 631 aa19.32■□□□□ 0.68
RNF43-206ENST00000582293 REC8O95072 547 aa19.32■□□□□ 0.68
RNF43-206ENST00000582293 SEC24BO95487 1268 aa19.32■□□□□ 0.68
RNF43-206ENST00000582293 TOP1P11387 765 aaKnown RBP19.32■□□□□ 0.68
RNF43-206ENST00000582293 DSG3P32926 999 aa19.32■□□□□ 0.68
RNF43-206ENST00000582293 LACTBP83111 547 aaPredicted RBP19.32■□□□□ 0.68
RNF43-206ENST00000582293 COG2Q14746 738 aa19.32■□□□□ 0.68
RNF43-206ENST00000582293 Q3C1V9 767 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms