RNA–Protein interactions for RNA: ENST00000582126.1

KPNB1-212, Transcript of karyopherin subunit beta 1, humanhuman

TSL 5

Gene KPNB1, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-212ENST00000582126 LDLRAD1Q5T700 205 aa16.63■□□□□ 0.25
KPNB1-212ENST00000582126 LRRC47Q8N1G4 583 aaKnown RBP16.63■□□□□ 0.25
KPNB1-212ENST00000582126 SMC1BQ8NDV3 1235 aa16.63■□□□□ 0.25
KPNB1-212ENST00000582126 RBM46Q8TBY0 533 aaKnown RBP16.63■□□□□ 0.25
KPNB1-212ENST00000582126 ZKSCAN4Q969J2 545 aaPredicted RBP16.63■□□□□ 0.25
KPNB1-212ENST00000582126 WDR18Q9BV38 432 aa16.63■□□□□ 0.25
KPNB1-212ENST00000582126 SLKQ9H2G2 1235 aaPredicted RBP16.63■□□□□ 0.25
KPNB1-212ENST00000582126 AS3MTQ9HBK9 375 aa16.63■□□□□ 0.25
KPNB1-212ENST00000582126 TMX2Q9Y320 296 aa16.63■□□□□ 0.25
KPNB1-212ENST00000582126 SCRN1Q12765 414 aa16.62■□□□□ 0.25
KPNB1-212ENST00000582126 PRKG1Q13976 671 aa16.62■□□□□ 0.25
KPNB1-212ENST00000582126 GRM4Q14833 912 aa16.62■□□□□ 0.25
KPNB1-212ENST00000582126 ZNF784Q8NCA9 323 aaPredicted RBP16.62■□□□□ 0.25
KPNB1-212ENST00000582126 INTS4Q96HW7 963 aaKnown RBP16.62■□□□□ 0.25
KPNB1-212ENST00000582126 IPO9Q96P70 1041 aaKnown RBP16.62■□□□□ 0.25
KPNB1-212ENST00000582126 MYL10Q9BUA6 226 aa16.62■□□□□ 0.25
KPNB1-212ENST00000582126 GBA2Q9HCG7 927 aaPredicted RBP16.62■□□□□ 0.25
KPNB1-212ENST00000582126 RBM28Q9NW13 759 aaKnown RBP16.62■□□□□ 0.25
KPNB1-212ENST00000582126 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.62■□□□□ 0.25
KPNB1-212ENST00000582126 CCDC196A0A1B0GTZ2 297 aa16.61■□□□□ 0.25
KPNB1-212ENST00000582126 A0A1W2PRG0 241 aa16.61■□□□□ 0.25
KPNB1-212ENST00000582126 DHX16O60231 1041 aaKnown RBP16.61■□□□□ 0.25
KPNB1-212ENST00000582126 TOMM70O94826 608 aa16.61■□□□□ 0.25
KPNB1-212ENST00000582126 CELF2O95319 508 aaKnown RBP16.61■□□□□ 0.25
KPNB1-212ENST00000582126 PDHBP11177 359 aa16.61■□□□□ 0.25
KPNB1-212ENST00000582126 KIF5BP33176 963 aa16.61■□□□□ 0.25
KPNB1-212ENST00000582126 ATP2B2Q01814 1243 aa16.61■□□□□ 0.25
KPNB1-212ENST00000582126 FMR1Q06787 632 aaKnown RBP eCLIP16.61■□□□□ 0.253e-8■■■□□ 16.5
KPNB1-212ENST00000582126 TTLL12Q14166 644 aaPredicted RBP16.61■□□□□ 0.25
KPNB1-212ENST00000582126 RTN1Q16799 776 aa16.61■□□□□ 0.25
KPNB1-212ENST00000582126 CTCFLQ8NI51 663 aaPredicted RBP16.61■□□□□ 0.25
KPNB1-212ENST00000582126 ACER1Q8TDN7 264 aa16.61■□□□□ 0.25
KPNB1-212ENST00000582126 DCAF4Q8WV16 495 aa16.61■□□□□ 0.25
KPNB1-212ENST00000582126 LLPHQ9BRT6 129 aaKnown RBP16.61■□□□□ 0.25
KPNB1-212ENST00000582126 KIAA1683Q9H0B3 1180 aa16.61■□□□□ 0.25
KPNB1-212ENST00000582126 FAM217BQ9NTX9 383 aaPredicted RBP16.61■□□□□ 0.25
KPNB1-212ENST00000582126 NAP1L2Q9ULW6 460 aaPredicted RBP16.61■□□□□ 0.25
KPNB1-212ENST00000582126 SPDYE5A6NIY4 337 aa16.6■□□□□ 0.25
KPNB1-212ENST00000582126 RXRAP19793 462 aa16.6■□□□□ 0.25
KPNB1-212ENST00000582126 ECE1P42892 770 aa16.6■□□□□ 0.25
KPNB1-212ENST00000582126 STK3Q13188 491 aa16.6■□□□□ 0.25
KPNB1-212ENST00000582126 ASPRV1Q53RT3 343 aa16.6■□□□□ 0.25
KPNB1-212ENST00000582126 MOB2Q70IA6 237 aa16.6■□□□□ 0.25
KPNB1-212ENST00000582126 CCDC83Q8IWF9 413 aa16.6■□□□□ 0.25
KPNB1-212ENST00000582126 NECAB1Q8N987 351 aa16.6■□□□□ 0.25
KPNB1-212ENST00000582126 FANCBQ8NB91 859 aa16.6■□□□□ 0.25
KPNB1-212ENST00000582126 ZNF280CQ8ND82 737 aa16.6■□□□□ 0.25
KPNB1-212ENST00000582126 NUP133Q8WUM0 1156 aa16.6■□□□□ 0.25
KPNB1-212ENST00000582126 GMCL1Q96IK5 515 aa16.6■□□□□ 0.25
KPNB1-212ENST00000582126 VCPKMTQ9H867 229 aa16.6■□□□□ 0.25
KPNB1-212ENST00000582126 ZNF408Q9H9D4 720 aa16.6■□□□□ 0.25
KPNB1-212ENST00000582126 GOPCQ9HD26 462 aa16.6■□□□□ 0.25
KPNB1-212ENST00000582126 PTPRFP10586 1907 aa16.59■□□□□ 0.25
KPNB1-212ENST00000582126 NDUFB10O96000 172 aa16.59■□□□□ 0.25
KPNB1-212ENST00000582126 CDC27P30260 824 aa16.59■□□□□ 0.25
KPNB1-212ENST00000582126 CCT2P78371 535 aaKnown RBP16.59■□□□□ 0.25
KPNB1-212ENST00000582126 PPATQ06203 517 aa16.59■□□□□ 0.25
KPNB1-212ENST00000582126 FSTL1Q12841 308 aa16.59■□□□□ 0.25
KPNB1-212ENST00000582126 GPATCH4Q5T3I0 446 aaKnown RBP16.59■□□□□ 0.25
KPNB1-212ENST00000582126 TMTC3Q6ZXV5 915 aa16.59■□□□□ 0.25
KPNB1-212ENST00000582126 CCDC84Q86UT8 332 aaPredicted RBP16.59■□□□□ 0.25
KPNB1-212ENST00000582126 ERO1BQ86YB8 467 aa16.59■□□□□ 0.25
KPNB1-212ENST00000582126 RAB11FIP4Q86YS3 637 aa16.59■□□□□ 0.25
KPNB1-212ENST00000582126 C2orf69Q8N8R5 385 aa16.59■□□□□ 0.25
KPNB1-212ENST00000582126 LPAR1Q92633 364 aa16.59■□□□□ 0.25
KPNB1-212ENST00000582126 C12orf42Q96LP6 360 aa16.59■□□□□ 0.25
KPNB1-212ENST00000582126 NCOA5Q9HCD5 579 aaKnown RBP16.59■□□□□ 0.25
KPNB1-212ENST00000582126 MAD2L2Q9UI95 211 aa16.59■□□□□ 0.25
KPNB1-212ENST00000582126 AFG3L2Q9Y4W6 797 aa16.59■□□□□ 0.25
KPNB1-212ENST00000582126 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.59■□□□□ 0.25
KPNB1-212ENST00000582126 LOC285556D6RIA3 1793 aa16.59■□□□□ 0.25
KPNB1-212ENST00000582126 PALM3A6NDB9 673 aaPredicted RBP16.58■□□□□ 0.24
KPNB1-212ENST00000582126 USP17L10C9JJH3 530 aa16.58■□□□□ 0.24
KPNB1-212ENST00000582126 F5H6K3 240 aa16.58■□□□□ 0.24
KPNB1-212ENST00000582126 CDKL5O76039 1030 aa16.58■□□□□ 0.24
KPNB1-212ENST00000582126 PARP1P09874 1014 aaKnown RBP16.58■□□□□ 0.24
KPNB1-212ENST00000582126 IFNAR1P17181 557 aa16.58■□□□□ 0.24
KPNB1-212ENST00000582126 GNAQP50148 359 aa16.58■□□□□ 0.24
KPNB1-212ENST00000582126 USP14P54578 494 aa16.58■□□□□ 0.24
KPNB1-212ENST00000582126 KLRC3Q07444 240 aa16.58■□□□□ 0.24
KPNB1-212ENST00000582126 ZNF543Q08ER8 600 aa16.58■□□□□ 0.24
KPNB1-212ENST00000582126 PPIL2Q13356 520 aa16.58■□□□□ 0.24
KPNB1-212ENST00000582126 NTRK3Q16288 839 aa16.58■□□□□ 0.24
KPNB1-212ENST00000582126 CST9Q5W186 159 aa16.58■□□□□ 0.24
KPNB1-212ENST00000582126 SLFN13Q68D06 897 aa16.58■□□□□ 0.24
KPNB1-212ENST00000582126 CPLX2Q6PUV4 134 aaKnown RBP16.58■□□□□ 0.24
KPNB1-212ENST00000582126 NSUN7Q8NE18 718 aaKnown RBP16.58■□□□□ 0.24
KPNB1-212ENST00000582126 SMARCC2Q8TAQ2 1214 aa16.58■□□□□ 0.24
KPNB1-212ENST00000582126 CLMNQ96JQ2 1002 aa16.58■□□□□ 0.24
KPNB1-212ENST00000582126 FEZ1Q99689 392 aa16.58■□□□□ 0.24
KPNB1-212ENST00000582126 ZHX2Q9Y6X8 837 aa16.58■□□□□ 0.24
KPNB1-212ENST00000582126 STK36Q9NRP7 1315 aa16.57■□□□□ 0.24
KPNB1-212ENST00000582126 C19orf81C9J6K1 198 aa16.57■□□□□ 0.24
KPNB1-212ENST00000582126 UBE2Q2LH0YL09 131 aa16.57■□□□□ 0.24
KPNB1-212ENST00000582126 CPLX1O14810 134 aa16.57■□□□□ 0.24
KPNB1-212ENST00000582126 CTDNEP1O95476 244 aa16.57■□□□□ 0.24
KPNB1-212ENST00000582126 ADD1P35611 737 aaKnown RBP16.57■□□□□ 0.24
KPNB1-212ENST00000582126 BACE1P56817 501 aa16.57■□□□□ 0.24
KPNB1-212ENST00000582126 FUT2Q10981 343 aa16.57■□□□□ 0.24
KPNB1-212ENST00000582126 SH3D19Q5HYK7 790 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms