RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 PICALMQ13492 652 aa10.75□□□□□ -0.69
SS18-220ENST00000582092 GRIK5Q16478 980 aa10.75□□□□□ -0.69
SS18-220ENST00000582092 SUPT20HL1Q3ZLR7 823 aa10.75□□□□□ -0.69
SS18-220ENST00000582092 FAM47AQ5JRC9 791 aa10.75□□□□□ -0.69
SS18-220ENST00000582092 REM2Q8IYK8 340 aaPredicted RBP10.75□□□□□ -0.69
SS18-220ENST00000582092 FBXO18Q8NFZ0 1043 aa10.75□□□□□ -0.69
SS18-220ENST00000582092 BICD2Q8TD16 824 aa10.75□□□□□ -0.69
SS18-220ENST00000582092 CHAMP1Q96JM3 812 aa10.75□□□□□ -0.69
SS18-220ENST00000582092 VEZTQ9HBM0 779 aa10.75□□□□□ -0.69
SS18-220ENST00000582092 BRMS1Q9HCU9 246 aa10.75□□□□□ -0.69
SS18-220ENST00000582092 ASTN2O75129 1339 aaPredicted RBP10.75□□□□□ -0.69
SS18-220ENST00000582092 MYH2Q9UKX2 1941 aa10.74□□□□□ -0.69
SS18-220ENST00000582092 PPP1R12BO60237 982 aaPredicted RBP10.74□□□□□ -0.69
SS18-220ENST00000582092 DEXIO95424 95 aa10.74□□□□□ -0.69
SS18-220ENST00000582092 CDC27P30260 824 aa10.74□□□□□ -0.69
SS18-220ENST00000582092 CEBPZQ03701 1054 aaKnown RBP10.74□□□□□ -0.69
SS18-220ENST00000582092 ZSCAN23Q3MJ62 389 aa10.74□□□□□ -0.69
SS18-220ENST00000582092 PPP4R3BQ5MIZ7 849 aa10.74□□□□□ -0.69
SS18-220ENST00000582092 CCDC183Q5T5S1 534 aa10.74□□□□□ -0.69
SS18-220ENST00000582092 DGKHQ86XP1 1220 aa10.74□□□□□ -0.69
SS18-220ENST00000582092 CCDC82Q8N4S0 544 aa10.74□□□□□ -0.69
SS18-220ENST00000582092 ENAHQ8N8S7 591 aaPredicted RBP10.74□□□□□ -0.69
SS18-220ENST00000582092 GPT2Q8TD30 523 aa10.74□□□□□ -0.69
SS18-220ENST00000582092 PHKBQ93100 1093 aa10.74□□□□□ -0.69
SS18-220ENST00000582092 DYNLL2Q96FJ2 89 aa10.74□□□□□ -0.69
SS18-220ENST00000582092 ZBED3Q96IU2 234 aaPredicted RBP10.74□□□□□ -0.69
SS18-220ENST00000582092 MRIQ9BWK5 157 aa10.74□□□□□ -0.69
SS18-220ENST00000582092 SENP2Q9HC62 589 aa10.74□□□□□ -0.69
SS18-220ENST00000582092 WBP1LQ9NX94 342 aa10.74□□□□□ -0.69
SS18-220ENST00000582092 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.74□□□□□ -0.69
SS18-220ENST00000582092 DAGLAQ9Y4D2 1042 aa10.74□□□□□ -0.69
SS18-220ENST00000582092 GAKO14976 1311 aa10.74□□□□□ -0.69
SS18-220ENST00000582092 ELP1O95163 1332 aa10.74□□□□□ -0.69
SS18-220ENST00000582092 STK36Q9NRP7 1315 aa10.74□□□□□ -0.69
SS18-220ENST00000582092 GADD45BO75293 160 aaPredicted RBP10.73□□□□□ -0.69
SS18-220ENST00000582092 FDPSP14324 419 aaKnown RBP10.73□□□□□ -0.69
SS18-220ENST00000582092 CRKP46108 304 aa10.73□□□□□ -0.69
SS18-220ENST00000582092 CDK8P49336 464 aa10.73□□□□□ -0.69
SS18-220ENST00000582092 STK38Q15208 465 aa10.73□□□□□ -0.69
SS18-220ENST00000582092 SEC23AQ15436 765 aa10.73□□□□□ -0.69
SS18-220ENST00000582092 KRT40Q6A162 431 aa10.73□□□□□ -0.69
SS18-220ENST00000582092 CRACR2BQ8N4Y2 399 aaPredicted RBP10.73□□□□□ -0.69
SS18-220ENST00000582092 HOOK2Q96ED9 719 aa10.73□□□□□ -0.69
SS18-220ENST00000582092 PRMT6Q96LA8 375 aaPredicted RBP10.73□□□□□ -0.69
SS18-220ENST00000582092 DEFB129Q9H1M3 183 aa10.73□□□□□ -0.69
SS18-220ENST00000582092 RBM27Q9P2N5 1060 aaKnown RBP10.73□□□□□ -0.69
SS18-220ENST00000582092 TACC3Q9Y6A5 838 aa10.73□□□□□ -0.69
SS18-220ENST00000582092 BAZ2AQ9UIF9 1905 aaKnown RBP10.73□□□□□ -0.69
SS18-220ENST00000582092 FLT1P17948 1338 aa10.73□□□□□ -0.69
SS18-220ENST00000582092 THSD7BQ9C0I4 1608 aa10.73□□□□□ -0.69
SS18-220ENST00000582092 CLRN2A0PK11 232 aa10.72□□□□□ -0.69
SS18-220ENST00000582092 ME1P48163 572 aa10.72□□□□□ -0.69
SS18-220ENST00000582092 FAM173BQ6P4H8 233 aa10.72□□□□□ -0.69
SS18-220ENST00000582092 CCDC73Q6ZRK6 1079 aa10.72□□□□□ -0.69
SS18-220ENST00000582092 C16orf86Q6ZW13 317 aa10.72□□□□□ -0.69
SS18-220ENST00000582092 ZSCAN29Q8IWY8 852 aaPredicted RBP10.72□□□□□ -0.69
SS18-220ENST00000582092 LEO1Q8WVC0 666 aaPredicted RBP10.72□□□□□ -0.69
SS18-220ENST00000582092 RNF26Q9BY78 433 aaPredicted RBP10.72□□□□□ -0.69
SS18-220ENST00000582092 PRDM10Q9NQV6 1147 aa10.72□□□□□ -0.69
SS18-220ENST00000582092 TCP11L1Q9NUJ3 509 aa10.72□□□□□ -0.69
SS18-220ENST00000582092 ZNF70Q9UC06 446 aaPredicted RBP10.72□□□□□ -0.69
SS18-220ENST00000582092 SWAP70Q9UH65 585 aa10.72□□□□□ -0.69
SS18-220ENST00000582092 STX8Q9UNK0 236 aa10.72□□□□□ -0.69
SS18-220ENST00000582092 UNCXA6NJT0 531 aa10.71□□□□□ -0.69
SS18-220ENST00000582092 FOXN1O15353 648 aa10.71□□□□□ -0.69
SS18-220ENST00000582092 PRPF3O43395 683 aaKnown RBP10.71□□□□□ -0.69
SS18-220ENST00000582092 AOC2O75106 756 aa10.71□□□□□ -0.69
SS18-220ENST00000582092 IREB2P48200 963 aaKnown RBP10.71□□□□□ -0.69
SS18-220ENST00000582092 RHBDL3P58872 404 aa10.71□□□□□ -0.69
SS18-220ENST00000582092 ZNF445P59923 1031 aa10.71□□□□□ -0.69
SS18-220ENST00000582092 SPDYE2Q495Y8 402 aa10.71□□□□□ -0.69
SS18-220ENST00000582092 OTUD7BQ6GQQ9 843 aa10.71□□□□□ -0.69
SS18-220ENST00000582092 DLK2Q6UY11 383 aa10.71□□□□□ -0.69
SS18-220ENST00000582092 PNMA1Q8ND90 353 aa10.71□□□□□ -0.69
SS18-220ENST00000582092 LZTS2Q9BRK4 669 aa10.71□□□□□ -0.69
SS18-220ENST00000582092 DHX36Q9H2U1 1008 aaKnown RBP10.71□□□□□ -0.69
SS18-220ENST00000582092 TSPY26PQ9H489 355 aa10.71□□□□□ -0.69
SS18-220ENST00000582092 TDRD3Q9H7E2 651 aaKnown RBP10.71□□□□□ -0.69
SS18-220ENST00000582092 GRPEL1Q9HAV7 217 aa10.71□□□□□ -0.69
SS18-220ENST00000582092 NID2Q14112 1375 aa10.7□□□□□ -0.7
SS18-220ENST00000582092 SYCE3A1L190 88 aa10.7□□□□□ -0.7
SS18-220ENST00000582092 MPHOSPH10O00566 681 aaKnown RBP10.7□□□□□ -0.7
SS18-220ENST00000582092 NMT2O60551 498 aa10.7□□□□□ -0.7
SS18-220ENST00000582092 SLC10A3P09131 477 aa10.7□□□□□ -0.7
SS18-220ENST00000582092 PLCD1P51178 756 aa10.7□□□□□ -0.7
SS18-220ENST00000582092 RASA3Q14644 834 aa10.7□□□□□ -0.7
SS18-220ENST00000582092 ZRSR1Q15695 479 aaKnown RBP10.7□□□□□ -0.7
SS18-220ENST00000582092 NTRK3Q16288 839 aa10.7□□□□□ -0.7
SS18-220ENST00000582092 PRAMEF18Q5VWM3 479 aa10.7□□□□□ -0.7
SS18-220ENST00000582092 CDC42EP5Q6NZY7 148 aa10.7□□□□□ -0.7
SS18-220ENST00000582092 LRSAM1Q6UWE0 723 aa10.7□□□□□ -0.7
SS18-220ENST00000582092 NEDD1Q8NHV4 660 aa10.7□□□□□ -0.7
SS18-220ENST00000582092 KCNG4Q8TDN1 519 aa10.7□□□□□ -0.7
SS18-220ENST00000582092 ZDHHC15Q96MV8 337 aa10.7□□□□□ -0.7
SS18-220ENST00000582092 MAP3K14Q99558 947 aa10.7□□□□□ -0.7
SS18-220ENST00000582092 FAM217BQ9NTX9 383 aaPredicted RBP10.7□□□□□ -0.7
SS18-220ENST00000582092 DDX19AQ9NUU7 478 aaKnown RBP10.7□□□□□ -0.7
SS18-220ENST00000582092 RTEL1Q9NZ71 1219 aa10.7□□□□□ -0.7
SS18-220ENST00000582092 SERPINB13Q9UIV8 391 aa10.7□□□□□ -0.7
SS18-220ENST00000582092 RCOR1Q9UKL0 485 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms