RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 CTR9Q6PD62 1173 aa25.12■■□□□ 1.61
CCDC42-203ENST00000581598 SIAH1Q8IUQ4 282 aa25.12■■□□□ 1.61
CCDC42-203ENST00000581598 APPBP2Q92624 585 aa25.12■■□□□ 1.61
CCDC42-203ENST00000581598 DPF3Q92784 378 aa25.12■■□□□ 1.61
CCDC42-203ENST00000581598 APBA2Q99767 749 aa25.12■■□□□ 1.61
CCDC42-203ENST00000581598 ARHGEF10LQ9HCE6 1279 aa25.12■■□□□ 1.61
CCDC42-203ENST00000581598 HOXC10Q9NYD6 342 aa25.12■■□□□ 1.61
CCDC42-203ENST00000581598 CYP2D7A0A087X1C5 515 aa25.11■■□□□ 1.61
CCDC42-203ENST00000581598 ICA1Q05084 483 aa25.11■■□□□ 1.61
CCDC42-203ENST00000581598 COG2Q14746 738 aa25.11■■□□□ 1.61
CCDC42-203ENST00000581598 SBK1Q52WX2 424 aa25.11■■□□□ 1.61
CCDC42-203ENST00000581598 BTBD7Q9P203 1132 aa25.11■■□□□ 1.61
CCDC42-203ENST00000581598 SMIM22K7EJ46 135 aa25.1■■□□□ 1.61
CCDC42-203ENST00000581598 RNF113AO15541 343 aaKnown RBP25.1■■□□□ 1.61
CCDC42-203ENST00000581598 ZKSCAN1P17029 563 aaPredicted RBP25.1■■□□□ 1.61
CCDC42-203ENST00000581598 MAP2K5Q13163 448 aa25.1■■□□□ 1.61
CCDC42-203ENST00000581598 GREB1LQ9C091 1923 aaPredicted RBP25.1■■□□□ 1.61
CCDC42-203ENST00000581598 PARP14Q460N5 1801 aa25.09■■□□□ 1.61
CCDC42-203ENST00000581598 SLC15A5A6NIM6 579 aa25.09■■□□□ 1.61
CCDC42-203ENST00000581598 PRKAR2AP13861 404 aaKnown RBP25.09■■□□□ 1.61
CCDC42-203ENST00000581598 PTPREP23469 700 aa25.09■■□□□ 1.61
CCDC42-203ENST00000581598 LRRFIP1Q32MZ4 808 aaKnown RBP25.09■■□□□ 1.61
CCDC42-203ENST00000581598 OSBP2Q969R2 916 aa25.09■■□□□ 1.61
CCDC42-203ENST00000581598 VCPKMTQ9H867 229 aa25.09■■□□□ 1.61
CCDC42-203ENST00000581598 CWC22Q9HCG8 908 aaKnown RBP25.09■■□□□ 1.61
CCDC42-203ENST00000581598 ZNF236Q9UL36 1845 aa25.08■■□□□ 1.61
CCDC42-203ENST00000581598 GSG1L2A8MUP6 293 aa25.08■■□□□ 1.61
CCDC42-203ENST00000581598 ERC2O15083 957 aa25.08■■□□□ 1.61
CCDC42-203ENST00000581598 KIAA1755Q5JYT7 1200 aa25.08■■□□□ 1.61
CCDC42-203ENST00000581598 TSHZ3Q63HK5 1081 aa25.08■■□□□ 1.61
CCDC42-203ENST00000581598 MB21D1Q8N884 522 aa25.08■■□□□ 1.61
CCDC42-203ENST00000581598 TANGO6Q9C0B7 1094 aa25.08■■□□□ 1.61
CCDC42-203ENST00000581598 KANSL2Q9H9L4 492 aa25.08■■□□□ 1.61
CCDC42-203ENST00000581598 ROBO3Q96MS0 1386 aa25.07■■□□□ 1.6
CCDC42-203ENST00000581598 HOXC6P09630 235 aa25.07■■□□□ 1.6
CCDC42-203ENST00000581598 GRB14Q14449 540 aa25.07■■□□□ 1.6
CCDC42-203ENST00000581598 SHCBP1Q8NEM2 672 aa25.07■■□□□ 1.6
CCDC42-203ENST00000581598 PI4K2BQ8TCG2 481 aa25.07■■□□□ 1.6
CCDC42-203ENST00000581598 OGDHLQ9ULD0 1010 aa25.07■■□□□ 1.6
CCDC42-203ENST00000581598 COLQQ9Y215 455 aaPredicted RBP25.07■■□□□ 1.6
CCDC42-203ENST00000581598 NR2E3Q9Y5X4 410 aa25.07■■□□□ 1.6
CCDC42-203ENST00000581598 WDR46O15213 610 aaKnown RBP25.06■■□□□ 1.6
CCDC42-203ENST00000581598 GNAT2P19087 354 aa25.06■■□□□ 1.6
CCDC42-203ENST00000581598 DSG3P32926 999 aa25.06■■□□□ 1.6
CCDC42-203ENST00000581598 FXR1P51114 621 aaKnown RBP eCLIP25.06■■□□□ 1.6
CCDC42-203ENST00000581598 CACNB2Q08289 660 aaPredicted RBP25.06■■□□□ 1.6
CCDC42-203ENST00000581598 NECAB2Q7Z6G3 386 aa25.06■■□□□ 1.6
CCDC42-203ENST00000581598 CLEC10AQ8IUN9 316 aa25.06■■□□□ 1.6
CCDC42-203ENST00000581598 PAWRQ96IZ0 340 aaKnown RBP25.06■■□□□ 1.6
CCDC42-203ENST00000581598 IVNS1ABPQ9Y6Y0 642 aa25.06■■□□□ 1.6
CCDC42-203ENST00000581598 ALPK3Q96L96 1907 aa25.06■■□□□ 1.6
CCDC42-203ENST00000581598 GPAA1O43292 621 aa25.05■■□□□ 1.6
CCDC42-203ENST00000581598 CCL14Q16627 93 aa25.05■■□□□ 1.6
CCDC42-203ENST00000581598 STRNO43815 780 aa25.04■■□□□ 1.6
CCDC42-203ENST00000581598 EEF2P13639 858 aaKnown RBP25.04■■□□□ 1.6
CCDC42-203ENST00000581598 MNX1P50219 401 aaPredicted RBP25.04■■□□□ 1.6
CCDC42-203ENST00000581598 WDR78Q5VTH9 848 aa25.04■■□□□ 1.6
CCDC42-203ENST00000581598 MOV10L1Q9BXT6 1211 aaKnown RBP25.04■■□□□ 1.6
CCDC42-203ENST00000581598 SPATC1LQ9H0A9 340 aa25.04■■□□□ 1.6
CCDC42-203ENST00000581598 NEFLP07196 543 aa25.03■■□□□ 1.6
CCDC42-203ENST00000581598 DIS3LQ8TF46 1054 aaKnown RBP25.03■■□□□ 1.6
CCDC42-203ENST00000581598 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.03■■□□□ 1.6
CCDC42-203ENST00000581598 SALL3Q9BXA9 1300 aa25.03■■□□□ 1.6
CCDC42-203ENST00000581598 FLOT1O75955 427 aa25.02■■□□□ 1.6
CCDC42-203ENST00000581598 IGHA2P01877 340 aa25.02■■□□□ 1.6
CCDC42-203ENST00000581598 MX1P20591 662 aa25.02■■□□□ 1.6
CCDC42-203ENST00000581598 RASA1P20936 1047 aa25.02■■□□□ 1.6
CCDC42-203ENST00000581598 MFSD14CQ5VZR4 134 aa25.02■■□□□ 1.6
CCDC42-203ENST00000581598 SPICE1Q8N0Z3 855 aa25.02■■□□□ 1.6
CCDC42-203ENST00000581598 NBPF3Q9H094 633 aa25.02■■□□□ 1.6
CCDC42-203ENST00000581598 EPB41L4AQ9HCS5 686 aaPredicted RBP25.02■■□□□ 1.6
CCDC42-203ENST00000581598 ADAMTS5Q9UNA0 930 aa25.02■■□□□ 1.6
CCDC42-203ENST00000581598 FRMPD3Q5JV73 1810 aa25.01■■□□□ 1.59
CCDC42-203ENST00000581598 M0R2C6 588 aa25.01■■□□□ 1.59
CCDC42-203ENST00000581598 EVI5O60447 810 aa25.01■■□□□ 1.59
CCDC42-203ENST00000581598 IRX6P78412 446 aaPredicted RBP25.01■■□□□ 1.59
CCDC42-203ENST00000581598 OTUD7AQ8TE49 926 aaPredicted RBP25.01■■□□□ 1.59
CCDC42-203ENST00000581598 CRBNQ96SW2 442 aa25.01■■□□□ 1.59
CCDC42-203ENST00000581598 GOPCQ9HD26 462 aa25.01■■□□□ 1.59
CCDC42-203ENST00000581598 FLRT1Q9NZU1 646 aa25.01■■□□□ 1.59
CCDC42-203ENST00000581598 SZT2Q5T011 3432 aa25■■□□□ 1.59
CCDC42-203ENST00000581598 PATL2C9JE40 543 aaKnown RBP25■■□□□ 1.59
CCDC42-203ENST00000581598 CCND3P30281 292 aaPredicted RBP25■■□□□ 1.59
CCDC42-203ENST00000581598 HDAC1Q13547 482 aaPredicted RBP25■■□□□ 1.59
CCDC42-203ENST00000581598 LHX8Q68G74 356 aa25■■□□□ 1.59
CCDC42-203ENST00000581598 ATG4CQ96DT6 458 aa25■■□□□ 1.59
CCDC42-203ENST00000581598 MROH8Q9H579 483 aa25■■□□□ 1.59
CCDC42-203ENST00000581598 MKNK2Q9HBH9 465 aa25■■□□□ 1.59
CCDC42-203ENST00000581598 ZNF287Q9HBT7 754 aa25■■□□□ 1.59
CCDC42-203ENST00000581598 NYAP2Q9P242 653 aa25■■□□□ 1.59
CCDC42-203ENST00000581598 COL11A1P12107 1806 aaPredicted RBP25■■□□□ 1.59
CCDC42-203ENST00000581598 TRIOBPQ9H2D6 2365 aa25■■□□□ 1.59
CCDC42-203ENST00000581598 MINDY4BA8MYZ0 360 aa24.99■■□□□ 1.59
CCDC42-203ENST00000581598 ERCC3P19447 782 aa24.99■■□□□ 1.59
CCDC42-203ENST00000581598 TDO2P48775 406 aa24.99■■□□□ 1.59
CCDC42-203ENST00000581598 AAMPQ13685 434 aa24.99■■□□□ 1.59
CCDC42-203ENST00000581598 CHRDL2Q6WN34 429 aa24.99■■□□□ 1.59
CCDC42-203ENST00000581598 ABRAQ8N0Z2 381 aa24.99■■□□□ 1.59
CCDC42-203ENST00000581598 NPLOC4Q8TAT6 608 aa24.99■■□□□ 1.59
CCDC42-203ENST00000581598 PRO3102Q9H379 93 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms