RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 MRPL41Q8IXM3 137 aaKnown RBP7.4□□□□□ -1.22
SMCHD1-205ENST00000581383 EAF1Q96JC9 268 aaPredicted RBP7.4□□□□□ -1.22
SMCHD1-205ENST00000581383 DIRC2Q96SL1 478 aa7.4□□□□□ -1.22
SMCHD1-205ENST00000581383 PPP1R16BQ96T49 567 aa7.4□□□□□ -1.22
SMCHD1-205ENST00000581383 SUPT16HQ9Y5B9 1047 aaKnown RBP7.4□□□□□ -1.22
SMCHD1-205ENST00000581383 CNTNAP4Q9C0A0 1308 aa7.4□□□□□ -1.22
SMCHD1-205ENST00000581383 GFRA2O00451 464 aa7.39□□□□□ -1.23
SMCHD1-205ENST00000581383 IGSF3O75054 1194 aa7.39□□□□□ -1.23
SMCHD1-205ENST00000581383 F13A1P00488 732 aa7.39□□□□□ -1.23
SMCHD1-205ENST00000581383 GARTP22102 1010 aa7.39□□□□□ -1.23
SMCHD1-205ENST00000581383 HK2P52789 917 aa7.39□□□□□ -1.23
SMCHD1-205ENST00000581383 BNC2Q6ZN30 1099 aaPredicted RBP7.39□□□□□ -1.23
SMCHD1-205ENST00000581383 SYDE1Q6ZW31 735 aaPredicted RBP7.39□□□□□ -1.23
SMCHD1-205ENST00000581383 TMPRSS7Q7RTY8 843 aa7.39□□□□□ -1.23
SMCHD1-205ENST00000581383 SLC43A3Q8NBI5 491 aa7.39□□□□□ -1.23
SMCHD1-205ENST00000581383 ABHD4Q8TB40 342 aa7.39□□□□□ -1.23
SMCHD1-205ENST00000581383 SREK1Q8WXA9 508 aaKnown RBP7.39□□□□□ -1.23
SMCHD1-205ENST00000581383 GPRASP2Q96D09 838 aa7.39□□□□□ -1.23
SMCHD1-205ENST00000581383 GPATCH2Q9NW75 528 aa7.39□□□□□ -1.23
SMCHD1-205ENST00000581383 UBP1Q9NZI7 540 aa7.39□□□□□ -1.23
SMCHD1-205ENST00000581383 PPP1R1BQ9UD71 204 aaPredicted RBP7.39□□□□□ -1.23
SMCHD1-205ENST00000581383 ST14Q9Y5Y6 855 aa7.39□□□□□ -1.23
SMCHD1-205ENST00000581383 ZNF503-AS2A6NEH8 195 aa7.38□□□□□ -1.23
SMCHD1-205ENST00000581383 GREM1O60565 184 aa7.38□□□□□ -1.23
SMCHD1-205ENST00000581383 TPP2P29144 1249 aaPredicted RBP7.38□□□□□ -1.23
SMCHD1-205ENST00000581383 DNAJA1P31689 397 aaKnown RBP7.38□□□□□ -1.23
SMCHD1-205ENST00000581383 GJA8P48165 433 aa7.38□□□□□ -1.23
SMCHD1-205ENST00000581383 MCATQ8IVS2 390 aaKnown RBP7.38□□□□□ -1.23
SMCHD1-205ENST00000581383 PIWIL2Q8TC59 973 aaKnown RBP7.38□□□□□ -1.23
SMCHD1-205ENST00000581383 NSUN3Q9H649 340 aaKnown RBP7.38□□□□□ -1.23
SMCHD1-205ENST00000581383 KCNQ5Q9NR82 932 aa7.38□□□□□ -1.23
SMCHD1-205ENST00000581383 ADAM30Q9UKF2 790 aa7.38□□□□□ -1.23
SMCHD1-205ENST00000581383 CEP131Q9UPN4 1083 aa7.38□□□□□ -1.23
SMCHD1-205ENST00000581383 NFIBO00712 420 aa7.37□□□□□ -1.23
SMCHD1-205ENST00000581383 TLR3O15455 904 aaKnown RBP7.37□□□□□ -1.23
SMCHD1-205ENST00000581383 LTKP29376 864 aa7.37□□□□□ -1.23
SMCHD1-205ENST00000581383 FBLN7Q53RD9 439 aa7.37□□□□□ -1.23
SMCHD1-205ENST00000581383 PRR23BQ6ZRT6 265 aa7.37□□□□□ -1.23
SMCHD1-205ENST00000581383 FAM196AQ6ZSG2 479 aa7.37□□□□□ -1.23
SMCHD1-205ENST00000581383 ANKLE2Q86XL3 938 aa7.37□□□□□ -1.23
SMCHD1-205ENST00000581383 VPS37DQ86XT2 251 aa7.37□□□□□ -1.23
SMCHD1-205ENST00000581383 FBXO27Q8NI29 283 aa7.37□□□□□ -1.23
SMCHD1-205ENST00000581383 ZSCAN18Q8TBC5 510 aaPredicted RBP7.37□□□□□ -1.23
SMCHD1-205ENST00000581383 MYLIPQ8WY64 445 aa7.37□□□□□ -1.23
SMCHD1-205ENST00000581383 TOX2Q96NM4 488 aa7.37□□□□□ -1.23
SMCHD1-205ENST00000581383 NT5C1AQ9BXI3 368 aa7.37□□□□□ -1.23
SMCHD1-205ENST00000581383 TANGO6Q9C0B7 1094 aa7.37□□□□□ -1.23
SMCHD1-205ENST00000581383 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.37□□□□□ -1.23
SMCHD1-205ENST00000581383 KLHL3Q9UH77 587 aa7.37□□□□□ -1.23
SMCHD1-205ENST00000581383 DUSP13Q9UII6 198 aa7.37□□□□□ -1.23
SMCHD1-205ENST00000581383 FAM221AA4D161 298 aa7.36□□□□□ -1.23
SMCHD1-205ENST00000581383 CRKP46108 304 aa7.36□□□□□ -1.23
SMCHD1-205ENST00000581383 ARID5AQ03989 594 aa7.36□□□□□ -1.23
SMCHD1-205ENST00000581383 APOBRQ0VD83 1088 aa7.36□□□□□ -1.23
SMCHD1-205ENST00000581383 MLECQ14165 292 aa7.36□□□□□ -1.23
SMCHD1-205ENST00000581383 CLEC16AQ2KHT3 1053 aa7.36□□□□□ -1.23
SMCHD1-205ENST00000581383 CCDC84Q86UT8 332 aaPredicted RBP7.36□□□□□ -1.23
SMCHD1-205ENST00000581383 PHACTR4Q8IZ21 702 aa7.36□□□□□ -1.23
SMCHD1-205ENST00000581383 GATAD2BQ8WXI9 593 aa7.36□□□□□ -1.23
SMCHD1-205ENST00000581383 ACSF2Q96CM8 615 aaPredicted RBP7.36□□□□□ -1.23
SMCHD1-205ENST00000581383 DRC1Q96MC2 740 aa7.36□□□□□ -1.23
SMCHD1-205ENST00000581383 ASCC2Q9H1I8 757 aaPredicted RBP7.36□□□□□ -1.23
SMCHD1-205ENST00000581383 TMEM59LQ9UK28 342 aa7.36□□□□□ -1.23
SMCHD1-205ENST00000581383 CORINQ9Y5Q5 1042 aa7.36□□□□□ -1.23
SMCHD1-205ENST00000581383 TMEM253P0C7T8 217 aa7.35□□□□□ -1.23
SMCHD1-205ENST00000581383 SF3A1Q15459 793 aaKnown RBP7.35□□□□□ -1.23
SMCHD1-205ENST00000581383 SEZ6Q53EL9 994 aa7.35□□□□□ -1.23
SMCHD1-205ENST00000581383 FBXO15Q8NCQ5 510 aaPredicted RBP7.35□□□□□ -1.23
SMCHD1-205ENST00000581383 RASGRP4Q8TDF6 673 aa7.35□□□□□ -1.23
SMCHD1-205ENST00000581383 DCP1AQ9NPI6 582 aaPredicted RBP7.35□□□□□ -1.23
SMCHD1-205ENST00000581383 DNAJC25-GNG10A0A024R161 153 aa7.34□□□□□ -1.23
SMCHD1-205ENST00000581383 UPK3BL1B0FP48 263 aa7.34□□□□□ -1.23
SMCHD1-205ENST00000581383 UPK3BL2E5RIL1 263 aa7.34□□□□□ -1.23
SMCHD1-205ENST00000581383 CILPO75339 1184 aa7.34□□□□□ -1.23
SMCHD1-205ENST00000581383 ATF4P18848 351 aaPredicted RBP7.34□□□□□ -1.23
SMCHD1-205ENST00000581383 EGR3Q06889 387 aa7.34□□□□□ -1.23
SMCHD1-205ENST00000581383 RALGPS1Q5JS13 557 aa7.34□□□□□ -1.23
SMCHD1-205ENST00000581383 LCE5AQ5TCM9 118 aa7.34□□□□□ -1.23
SMCHD1-205ENST00000581383 CYB5D2Q8WUJ1 264 aa7.34□□□□□ -1.23
SMCHD1-205ENST00000581383 GMLQ99445 158 aa7.34□□□□□ -1.23
SMCHD1-205ENST00000581383 EPB41L4BQ9H329 900 aa7.34□□□□□ -1.23
SMCHD1-205ENST00000581383 GINM1Q9NU53 330 aa7.34□□□□□ -1.23
SMCHD1-205ENST00000581383 EFR3BQ9Y2G0 817 aa7.34□□□□□ -1.23
SMCHD1-205ENST00000581383 ROBO2Q9HCK4 1378 aa7.33□□□□□ -1.24
SMCHD1-205ENST00000581383 GRIN3BO60391 1043 aa7.33□□□□□ -1.24
SMCHD1-205ENST00000581383 GBP1P32455 592 aa7.33□□□□□ -1.24
SMCHD1-205ENST00000581383 MESP2Q0VG99 397 aa7.33□□□□□ -1.24
SMCHD1-205ENST00000581383 OXR1Q8N573 874 aa7.33□□□□□ -1.24
SMCHD1-205ENST00000581383 BHLHE22Q8NFJ8 381 aaPredicted RBP7.33□□□□□ -1.24
SMCHD1-205ENST00000581383 DHX38Q92620 1227 aaKnown RBP7.33□□□□□ -1.24
SMCHD1-205ENST00000581383 NKD1Q969G9 470 aa7.33□□□□□ -1.24
SMCHD1-205ENST00000581383 SPATA32Q96LK8 384 aa7.33□□□□□ -1.24
SMCHD1-205ENST00000581383 ADAMTS10Q9H324 1103 aa7.33□□□□□ -1.24
SMCHD1-205ENST00000581383 WASH4PA8MWX3 477 aa7.32□□□□□ -1.24
SMCHD1-205ENST00000581383 ATP2B1P20020 1258 aa7.32□□□□□ -1.24
SMCHD1-205ENST00000581383 MCM4P33991 863 aa7.32□□□□□ -1.24
SMCHD1-205ENST00000581383 NASPP49321 788 aaPredicted RBP7.32□□□□□ -1.24
SMCHD1-205ENST00000581383 MPP2Q14168 576 aa7.32□□□□□ -1.24
SMCHD1-205ENST00000581383 CWF19L2Q2TBE0 894 aaKnown RBP7.32□□□□□ -1.24
SMCHD1-205ENST00000581383 MCF2L2Q86YR7 1114 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms