RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 CWC22Q9HCG8 908 aaKnown RBP25.53■■□□□ 1.68
CSNK1D-216ENST00000581108 HMX1Q9NP08 348 aaPredicted RBP25.53■■□□□ 1.68
CSNK1D-216ENST00000581108 M0R2C6 588 aa25.52■■□□□ 1.68
CSNK1D-216ENST00000581108 GPAA1O43292 621 aa25.52■■□□□ 1.68
CSNK1D-216ENST00000581108 GLRX3O76003 335 aaKnown RBP25.52■■□□□ 1.68
CSNK1D-216ENST00000581108 SBK1Q52WX2 424 aa25.52■■□□□ 1.68
CSNK1D-216ENST00000581108 WDR78Q5VTH9 848 aa25.52■■□□□ 1.68
CSNK1D-216ENST00000581108 SPICE1Q8N0Z3 855 aa25.52■■□□□ 1.68
CSNK1D-216ENST00000581108 STK11IPQ8N1F8 1099 aa25.52■■□□□ 1.68
CSNK1D-216ENST00000581108 DPF3Q92784 378 aa25.52■■□□□ 1.68
CSNK1D-216ENST00000581108 CRISPLD2Q9H0B8 497 aa25.52■■□□□ 1.68
CSNK1D-216ENST00000581108 HOXC10Q9NYD6 342 aa25.52■■□□□ 1.68
CSNK1D-216ENST00000581108 RPTORQ8N122 1335 aa25.52■■□□□ 1.68
CSNK1D-216ENST00000581108 MINDY4BA8MYZ0 360 aa25.51■■□□□ 1.67
CSNK1D-216ENST00000581108 MX1P20591 662 aa25.51■■□□□ 1.67
CSNK1D-216ENST00000581108 RGS2P41220 211 aa25.51■■□□□ 1.67
CSNK1D-216ENST00000581108 ANKRD45Q5TZF3 282 aa25.51■■□□□ 1.67
CSNK1D-216ENST00000581108 GIMAP6Q6P9H5 292 aa25.51■■□□□ 1.67
CSNK1D-216ENST00000581108 GCC1Q96CN9 775 aa25.51■■□□□ 1.67
CSNK1D-216ENST00000581108 EEF2P13639 858 aaKnown RBP25.5■■□□□ 1.67
CSNK1D-216ENST00000581108 ATP2B2Q01814 1243 aa25.5■■□□□ 1.67
CSNK1D-216ENST00000581108 CCL14Q16627 93 aa25.5■■□□□ 1.67
CSNK1D-216ENST00000581108 LPAR1Q92633 364 aa25.5■■□□□ 1.67
CSNK1D-216ENST00000581108 SEC62Q99442 399 aaKnown RBP25.5■■□□□ 1.67
CSNK1D-216ENST00000581108 SH2D4AQ9H788 454 aa25.5■■□□□ 1.67
CSNK1D-216ENST00000581108 VCPKMTQ9H867 229 aa25.5■■□□□ 1.67
CSNK1D-216ENST00000581108 KANSL2Q9H9L4 492 aa25.5■■□□□ 1.67
CSNK1D-216ENST00000581108 EPB41L4AQ9HCS5 686 aaPredicted RBP25.5■■□□□ 1.67
CSNK1D-216ENST00000581108 SALL3Q9BXA9 1300 aa25.49■■□□□ 1.67
CSNK1D-216ENST00000581108 H0YGN5 161 aa25.49■■□□□ 1.67
CSNK1D-216ENST00000581108 APPP05067 770 aa25.49■■□□□ 1.67
CSNK1D-216ENST00000581108 PRKAR2AP13861 404 aaKnown RBP25.49■■□□□ 1.67
CSNK1D-216ENST00000581108 CAPN2P17655 700 aa25.49■■□□□ 1.67
CSNK1D-216ENST00000581108 MAP2K5Q13163 448 aa25.49■■□□□ 1.67
CSNK1D-216ENST00000581108 LRRFIP1Q32MZ4 808 aaKnown RBP25.49■■□□□ 1.67
CSNK1D-216ENST00000581108 MAP3K21Q5TCX8 1036 aa25.49■■□□□ 1.67
CSNK1D-216ENST00000581108 HTATIP2Q9BUP3 242 aa25.49■■□□□ 1.67
CSNK1D-216ENST00000581108 ZKSCAN1P17029 563 aaPredicted RBP25.48■■□□□ 1.67
CSNK1D-216ENST00000581108 GNAT2P19087 354 aa25.48■■□□□ 1.67
CSNK1D-216ENST00000581108 PTPREP23469 700 aa25.48■■□□□ 1.67
CSNK1D-216ENST00000581108 HDAC1Q13547 482 aaPredicted RBP25.48■■□□□ 1.67
CSNK1D-216ENST00000581108 TRMT44Q8IYL2 757 aaKnown RBP25.48■■□□□ 1.67
CSNK1D-216ENST00000581108 FSD1Q9BTV5 496 aa25.48■■□□□ 1.67
CSNK1D-216ENST00000581108 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.48■■□□□ 1.67
CSNK1D-216ENST00000581108 ZBTB47Q9UFB7 747 aaPredicted RBP25.48■■□□□ 1.67
CSNK1D-216ENST00000581108 PARP14Q460N5 1801 aa25.48■■□□□ 1.67
CSNK1D-216ENST00000581108 SLC15A5A6NIM6 579 aa25.47■■□□□ 1.67
CSNK1D-216ENST00000581108 PATL2C9JE40 543 aaKnown RBP25.47■■□□□ 1.67
CSNK1D-216ENST00000581108 FLOT1O75955 427 aa25.47■■□□□ 1.67
CSNK1D-216ENST00000581108 RASA1P20936 1047 aa25.47■■□□□ 1.67
CSNK1D-216ENST00000581108 DSG3P32926 999 aa25.47■■□□□ 1.67
CSNK1D-216ENST00000581108 TDO2P48775 406 aa25.47■■□□□ 1.67
CSNK1D-216ENST00000581108 CACNB2Q08289 660 aaPredicted RBP25.47■■□□□ 1.67
CSNK1D-216ENST00000581108 APBA2Q99767 749 aa25.47■■□□□ 1.67
CSNK1D-216ENST00000581108 MKNK2Q9HBH9 465 aa25.47■■□□□ 1.67
CSNK1D-216ENST00000581108 GREB1LQ9C091 1923 aaPredicted RBP25.47■■□□□ 1.67
CSNK1D-216ENST00000581108 IFNL3Q8IZI9 196 aa25.46■■□□□ 1.67
CSNK1D-216ENST00000581108 PAWRQ96IZ0 340 aaKnown RBP25.46■■□□□ 1.67
CSNK1D-216ENST00000581108 MOV10L1Q9BXT6 1211 aaKnown RBP25.46■■□□□ 1.67
CSNK1D-216ENST00000581108 IVNS1ABPQ9Y6Y0 642 aa25.46■■□□□ 1.67
CSNK1D-216ENST00000581108 A0A0G2JMZ2 1700 aa25.46■■□□□ 1.67
CSNK1D-216ENST00000581108 WDR46O15213 610 aaKnown RBP25.45■■□□□ 1.66
CSNK1D-216ENST00000581108 HABP4Q5JVS0 413 aaKnown RBP25.45■■□□□ 1.66
CSNK1D-216ENST00000581108 ZMYM1Q5SVZ6 1142 aa25.45■■□□□ 1.66
CSNK1D-216ENST00000581108 SAMD1Q6SPF0 538 aaPredicted RBP25.45■■□□□ 1.66
CSNK1D-216ENST00000581108 DIS3LQ8TF46 1054 aaKnown RBP25.45■■□□□ 1.66
CSNK1D-216ENST00000581108 ATG4CQ96DT6 458 aa25.45■■□□□ 1.66
CSNK1D-216ENST00000581108 SPATC1LQ9H0A9 340 aa25.45■■□□□ 1.66
CSNK1D-216ENST00000581108 FLRT1Q9NZU1 646 aa25.45■■□□□ 1.66
CSNK1D-216ENST00000581108 ROBO3Q96MS0 1386 aa25.44■■□□□ 1.66
CSNK1D-216ENST00000581108 GRB14Q14449 540 aa25.44■■□□□ 1.66
CSNK1D-216ENST00000581108 COLQQ9Y215 455 aaPredicted RBP25.44■■□□□ 1.66
CSNK1D-216ENST00000581108 COL11A1P12107 1806 aaPredicted RBP25.44■■□□□ 1.66
CSNK1D-216ENST00000581108 RAD21O60216 631 aa25.43■■□□□ 1.66
CSNK1D-216ENST00000581108 CCND3P30281 292 aaPredicted RBP25.43■■□□□ 1.66
CSNK1D-216ENST00000581108 PLS1Q14651 629 aa25.43■■□□□ 1.66
CSNK1D-216ENST00000581108 MB21D1Q8N884 522 aa25.43■■□□□ 1.66
CSNK1D-216ENST00000581108 GOPCQ9HD26 462 aa25.43■■□□□ 1.66
CSNK1D-216ENST00000581108 STAP2Q9UGK3 403 aa25.43■■□□□ 1.66
CSNK1D-216ENST00000581108 PRDM1O75626 825 aa25.42■■□□□ 1.66
CSNK1D-216ENST00000581108 ERCC3P19447 782 aa25.42■■□□□ 1.66
CSNK1D-216ENST00000581108 NECAB2Q7Z6G3 386 aa25.42■■□□□ 1.66
CSNK1D-216ENST00000581108 ANKLE1Q8NAG6 615 aa25.42■■□□□ 1.66
CSNK1D-216ENST00000581108 NPLOC4Q8TAT6 608 aa25.42■■□□□ 1.66
CSNK1D-216ENST00000581108 NACAP1Q9BZK3 213 aa25.42■■□□□ 1.66
CSNK1D-216ENST00000581108 FBXO28Q9NVF7 368 aa25.42■■□□□ 1.66
CSNK1D-216ENST00000581108 ZNFX1Q9P2E3 1918 aaKnown RBP25.41■■□□□ 1.66
CSNK1D-216ENST00000581108 MYH4Q9Y623 1939 aa25.41■■□□□ 1.66
CSNK1D-216ENST00000581108 HOXC6P09630 235 aa25.41■■□□□ 1.66
CSNK1D-216ENST00000581108 MNX1P50219 401 aaPredicted RBP25.41■■□□□ 1.66
CSNK1D-216ENST00000581108 PDE1AP54750 535 aa25.41■■□□□ 1.66
CSNK1D-216ENST00000581108 ZNF444Q8N0Y2 327 aaPredicted RBP25.41■■□□□ 1.66
CSNK1D-216ENST00000581108 SHCBP1Q8NEM2 672 aa25.41■■□□□ 1.66
CSNK1D-216ENST00000581108 OGDHLQ9ULD0 1010 aa25.41■■□□□ 1.66
CSNK1D-216ENST00000581108 ALPK3Q96L96 1907 aa25.41■■□□□ 1.66
CSNK1D-216ENST00000581108 STRNO43815 780 aa25.4■■□□□ 1.66
CSNK1D-216ENST00000581108 FAM83BQ5T0W9 1011 aa25.4■■□□□ 1.66
CSNK1D-216ENST00000581108 CCDC129Q6ZRS4 1044 aa25.4■■□□□ 1.66
CSNK1D-216ENST00000581108 NYAP2Q9P242 653 aa25.4■■□□□ 1.66
CSNK1D-216ENST00000581108 ADAMTS5Q9UNA0 930 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms