RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 A0A1W2PPC1 479 aa29.68■■■□□ 2.34
CDC42EP4-205ENST00000580315 HERVK_113P62684 666 aa29.68■■■□□ 2.34
CDC42EP4-205ENST00000580315 SEPT2Q15019 361 aa29.68■■■□□ 2.34
CDC42EP4-205ENST00000580315 GPRC5AQ8NFJ5 357 aa29.68■■■□□ 2.34
CDC42EP4-205ENST00000580315 TRIB2Q92519 343 aa29.68■■■□□ 2.34
CDC42EP4-205ENST00000580315 LAMA3Q16787 3333 aa29.68■■■□□ 2.34
CDC42EP4-205ENST00000580315 MINDY4BA8MYZ0 360 aa29.67■■■□□ 2.34
CDC42EP4-205ENST00000580315 RILPL2Q969X0 211 aa29.67■■■□□ 2.34
CDC42EP4-205ENST00000580315 KIAA1683Q9H0B3 1180 aa29.67■■■□□ 2.34
CDC42EP4-205ENST00000580315 EPB41L4AQ9HCS5 686 aaPredicted RBP29.67■■■□□ 2.34
CDC42EP4-205ENST00000580315 HELLSQ9NRZ9 838 aa29.67■■■□□ 2.34
CDC42EP4-205ENST00000580315 CYP2B6P20813 491 aa29.66■■■□□ 2.34
CDC42EP4-205ENST00000580315 GUCY1A2P33402 732 aa29.66■■■□□ 2.34
CDC42EP4-205ENST00000580315 IFNL3Q8IZI9 196 aa29.66■■■□□ 2.34
CDC42EP4-205ENST00000580315 EMILIN3Q9NT22 766 aa29.66■■■□□ 2.34
CDC42EP4-205ENST00000580315 RBPJLQ9UBG7 517 aa29.66■■■□□ 2.34
CDC42EP4-205ENST00000580315 MNX1P50219 401 aaPredicted RBP29.65■■■□□ 2.34
CDC42EP4-205ENST00000580315 ZYXQ15942 572 aaKnown RBP29.65■■■□□ 2.34
CDC42EP4-205ENST00000580315 ACER1Q8TDN7 264 aa29.65■■■□□ 2.34
CDC42EP4-205ENST00000580315 C12orf42Q96LP6 360 aa29.65■■■□□ 2.34
CDC42EP4-205ENST00000580315 NUDT12Q9BQG2 462 aa29.65■■■□□ 2.34
CDC42EP4-205ENST00000580315 SMIM22K7EJ46 135 aa29.64■■■□□ 2.34
CDC42EP4-205ENST00000580315 XRCC5P13010 732 aaKnown RBP29.64■■■□□ 2.34
CDC42EP4-205ENST00000580315 AKR1B1P15121 316 aa29.64■■■□□ 2.34
CDC42EP4-205ENST00000580315 MAP3K21Q5TCX8 1036 aa29.64■■■□□ 2.34
CDC42EP4-205ENST00000580315 SOCS4Q8WXH5 440 aa29.64■■■□□ 2.34
CDC42EP4-205ENST00000580315 NBPF3Q9H094 633 aa29.64■■■□□ 2.34
CDC42EP4-205ENST00000580315 NAPBQ9H115 298 aa29.64■■■□□ 2.34
CDC42EP4-205ENST00000580315 ZNF287Q9HBT7 754 aa29.64■■■□□ 2.34
CDC42EP4-205ENST00000580315 PLXNB2O15031 1838 aa29.64■■■□□ 2.33
CDC42EP4-205ENST00000580315 Q3C1V9 767 aa29.63■■■□□ 2.33
CDC42EP4-205ENST00000580315 MKNK2Q9HBH9 465 aa29.63■■■□□ 2.33
CDC42EP4-205ENST00000580315 OGDHLQ9ULD0 1010 aa29.63■■■□□ 2.33
CDC42EP4-205ENST00000580315 ROBO3Q96MS0 1386 aa29.63■■■□□ 2.33
CDC42EP4-205ENST00000580315 BAZ2AQ9UIF9 1905 aaKnown RBP29.63■■■□□ 2.33
CDC42EP4-205ENST00000580315 PRKAR2AP13861 404 aaKnown RBP29.62■■■□□ 2.33
CDC42EP4-205ENST00000580315 MAPK4P31152 587 aa29.62■■■□□ 2.33
CDC42EP4-205ENST00000580315 POTEEQ6S8J3 1075 aa29.62■■■□□ 2.33
CDC42EP4-205ENST00000580315 CCDC129Q6ZRS4 1044 aa29.62■■■□□ 2.33
CDC42EP4-205ENST00000580315 C7orf61Q8IZ16 206 aa29.62■■■□□ 2.33
CDC42EP4-205ENST00000580315 SH2D4AQ9H788 454 aa29.62■■■□□ 2.33
CDC42EP4-205ENST00000580315 ARHGEF10LQ9HCE6 1279 aa29.62■■■□□ 2.33
CDC42EP4-205ENST00000580315 SOX1O00570 391 aaPredicted RBP29.61■■■□□ 2.33
CDC42EP4-205ENST00000580315 SLC3A2P08195 630 aaKnown RBP29.61■■■□□ 2.33
CDC42EP4-205ENST00000580315 ERVK-9P63128 1117 aa29.61■■■□□ 2.33
CDC42EP4-205ENST00000580315 ERVK-24P63145 666 aa29.61■■■□□ 2.33
CDC42EP4-205ENST00000580315 ICA1Q05084 483 aa29.61■■■□□ 2.33
CDC42EP4-205ENST00000580315 MCMDC2Q4G0Z9 681 aa29.61■■■□□ 2.33
CDC42EP4-205ENST00000580315 PORCNQ9H237 461 aa29.61■■■□□ 2.33
CDC42EP4-205ENST00000580315 ALPK3Q96L96 1907 aa29.61■■■□□ 2.33
CDC42EP4-205ENST00000580315 USP17L15C9J2P7 530 aa29.6■■■□□ 2.33
CDC42EP4-205ENST00000580315 USP17L13C9JLJ4 530 aa29.6■■■□□ 2.33
CDC42EP4-205ENST00000580315 USP17L11C9JVI0 530 aa29.6■■■□□ 2.33
CDC42EP4-205ENST00000580315 USP17L18D6R9N7 530 aa29.6■■■□□ 2.33
CDC42EP4-205ENST00000580315 USP17L22D6RA61 530 aa29.6■■■□□ 2.33
CDC42EP4-205ENST00000580315 USP17L17D6RBQ6 530 aa29.6■■■□□ 2.33
CDC42EP4-205ENST00000580315 USP17L19D6RCP7 530 aa29.6■■■□□ 2.33
CDC42EP4-205ENST00000580315 USP17L20D6RJB6 530 aa29.6■■■□□ 2.33
CDC42EP4-205ENST00000580315 USP17L24Q0WX57 530 aa29.6■■■□□ 2.33
CDC42EP4-205ENST00000580315 STK11IPQ8N1F8 1099 aa29.6■■■□□ 2.33
CDC42EP4-205ENST00000580315 GTF3C2Q8WUA4 911 aaPredicted RBP29.6■■■□□ 2.33
CDC42EP4-205ENST00000580315 USP6NLQ92738 828 aa29.6■■■□□ 2.33
CDC42EP4-205ENST00000580315 FAM227BQ96M60 508 aa29.6■■■□□ 2.33
CDC42EP4-205ENST00000580315 GDF15Q99988 308 aa29.6■■■□□ 2.33
CDC42EP4-205ENST00000580315 C11orf49Q9H6J7 331 aa29.6■■■□□ 2.33
CDC42EP4-205ENST00000580315 CCAR1Q8IX12 1150 aaKnown RBP29.59■■■□□ 2.33
CDC42EP4-205ENST00000580315 TRMT44Q8IYL2 757 aaKnown RBP29.59■■■□□ 2.33
CDC42EP4-205ENST00000580315 PAGR1Q9BTK6 254 aa29.59■■■□□ 2.33
CDC42EP4-205ENST00000580315 KANSL2Q9H9L4 492 aa29.59■■■□□ 2.33
CDC42EP4-205ENST00000580315 ZMYND8Q9ULU4 1186 aaPredicted RBP29.59■■■□□ 2.33
CDC42EP4-205ENST00000580315 A0A0D9SFI3 127 aa29.58■■■□□ 2.33
CDC42EP4-205ENST00000580315 VCAM1P19320 739 aa29.58■■■□□ 2.33
CDC42EP4-205ENST00000580315 NMIQ13287 307 aaPredicted RBP29.58■■■□□ 2.33
CDC42EP4-205ENST00000580315 GPR142Q7Z601 462 aa29.58■■■□□ 2.33
CDC42EP4-205ENST00000580315 LRCH3Q96II8 777 aa29.58■■■□□ 2.33
CDC42EP4-205ENST00000580315 A0A1W2PRG0 241 aa29.57■■■□□ 2.32
CDC42EP4-205ENST00000580315 ZKSCAN1P17029 563 aaPredicted RBP29.57■■■□□ 2.32
CDC42EP4-205ENST00000580315 SDSP20132 328 aa29.57■■■□□ 2.32
CDC42EP4-205ENST00000580315 RASA1P20936 1047 aa29.57■■■□□ 2.32
CDC42EP4-205ENST00000580315 BMP8BP34820 402 aa29.57■■■□□ 2.32
CDC42EP4-205ENST00000580315 PDE4BQ07343 736 aa29.57■■■□□ 2.32
CDC42EP4-205ENST00000580315 CACNB2Q08289 660 aaPredicted RBP29.57■■■□□ 2.32
CDC42EP4-205ENST00000580315 MORN1Q5T089 497 aa29.57■■■□□ 2.32
CDC42EP4-205ENST00000580315 PLEKHH3Q7Z736 793 aa29.57■■■□□ 2.32
CDC42EP4-205ENST00000580315 ZNF444Q8N0Y2 327 aaPredicted RBP29.57■■■□□ 2.32
CDC42EP4-205ENST00000580315 HIP1O00291 1037 aa29.56■■■□□ 2.32
CDC42EP4-205ENST00000580315 PDE4AP27815 886 aa29.56■■■□□ 2.32
CDC42EP4-205ENST00000580315 RGS2P41220 211 aa29.56■■■□□ 2.32
CDC42EP4-205ENST00000580315 MFAP1P55081 439 aaKnown RBP29.56■■■□□ 2.32
CDC42EP4-205ENST00000580315 PPARAQ07869 468 aa29.56■■■□□ 2.32
CDC42EP4-205ENST00000580315 TMX2Q9Y320 296 aa29.56■■■□□ 2.32
CDC42EP4-205ENST00000580315 ATP2B2Q01814 1243 aa29.55■■■□□ 2.32
CDC42EP4-205ENST00000580315 CCL14Q16627 93 aa29.55■■■□□ 2.32
CDC42EP4-205ENST00000580315 CATSPERGQ6ZRH7 1159 aa29.55■■■□□ 2.32
CDC42EP4-205ENST00000580315 CLEC10AQ8IUN9 316 aa29.55■■■□□ 2.32
CDC42EP4-205ENST00000580315 LPAR1Q92633 364 aa29.55■■■□□ 2.32
CDC42EP4-205ENST00000580315 RPAP3Q9H6T3 665 aaPredicted RBP29.55■■■□□ 2.32
CDC42EP4-205ENST00000580315 DIAPH3Q9NSV4 1193 aa29.55■■■□□ 2.32
CDC42EP4-205ENST00000580315 VPS53Q5VIR6 699 aa29.54■■■□□ 2.32
CDC42EP4-205ENST00000580315 RABGAP1Q9Y3P9 1069 aa29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms