RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 LRRC41Q15345 812 aa23.57■■□□□ 1.36
LIMD2-209ENST00000580222 RNPC3Q96LT9 517 aaKnown RBP23.57■■□□□ 1.36
LIMD2-209ENST00000580222 SEPT4O43236 478 aa23.56■■□□□ 1.36
LIMD2-209ENST00000580222 BAG3O95817 575 aa23.56■■□□□ 1.36
LIMD2-209ENST00000580222 ADORA2AP29274 412 aa23.56■■□□□ 1.36
LIMD2-209ENST00000580222 OLFML2BQ68BL8 750 aa23.56■■□□□ 1.36
LIMD2-209ENST00000580222 FEZ1Q99689 392 aa23.56■■□□□ 1.36
LIMD2-209ENST00000580222 NOL10Q9BSC4 688 aaKnown RBP23.56■■□□□ 1.36
LIMD2-209ENST00000580222 MOV10L1Q9BXT6 1211 aaKnown RBP23.56■■□□□ 1.36
LIMD2-209ENST00000580222 KIAA1683Q9H0B3 1180 aa23.56■■□□□ 1.36
LIMD2-209ENST00000580222 BDP1A6H8Y1 2624 aa23.56■■□□□ 1.36
LIMD2-209ENST00000580222 TMEM265A0A087WTH1 108 aa23.55■■□□□ 1.36
LIMD2-209ENST00000580222 MTX1Q13505 466 aa23.55■■□□□ 1.36
LIMD2-209ENST00000580222 FAM47AQ5JRC9 791 aa23.55■■□□□ 1.36
LIMD2-209ENST00000580222 C1orf53Q5VUE5 145 aa23.55■■□□□ 1.36
LIMD2-209ENST00000580222 TATDN1Q6P1N9 297 aa23.55■■□□□ 1.36
LIMD2-209ENST00000580222 CEP85Q6P2H3 762 aa23.55■■□□□ 1.36
LIMD2-209ENST00000580222 DPP9Q86TI2 863 aa23.55■■□□□ 1.36
LIMD2-209ENST00000580222 PLCG2P16885 1265 aa23.54■■□□□ 1.36
LIMD2-209ENST00000580222 DNAJB2P25686 324 aa23.54■■□□□ 1.36
LIMD2-209ENST00000580222 RAB3GAP1Q15042 981 aa23.54■■□□□ 1.36
LIMD2-209ENST00000580222 RPAP3Q9H6T3 665 aaPredicted RBP23.54■■□□□ 1.36
LIMD2-209ENST00000580222 CYP2E1P05181 493 aaPredicted RBP23.53■■□□□ 1.36
LIMD2-209ENST00000580222 GUCY1A2P33402 732 aa23.53■■□□□ 1.36
LIMD2-209ENST00000580222 ATP8B2P98198 1209 aa23.53■■□□□ 1.36
LIMD2-209ENST00000580222 AAMPQ13685 434 aa23.53■■□□□ 1.36
LIMD2-209ENST00000580222 PNMA6EA0A0J9YXQ4 647 aa23.52■■□□□ 1.36
LIMD2-209ENST00000580222 RPAP2Q8IXW5 612 aaPredicted RBP23.52■■□□□ 1.36
LIMD2-209ENST00000580222 PPM1EQ8WY54 764 aa23.52■■□□□ 1.36
LIMD2-209ENST00000580222 ZNF576Q9H609 170 aa23.52■■□□□ 1.36
LIMD2-209ENST00000580222 PIH1D3Q9NQM4 214 aaKnown RBP23.52■■□□□ 1.36
LIMD2-209ENST00000580222 TACC3Q9Y6A5 838 aa23.52■■□□□ 1.36
LIMD2-209ENST00000580222 KIAA0355O15063 1070 aa23.51■■□□□ 1.35
LIMD2-209ENST00000580222 HLA-DOAP06340 250 aa23.51■■□□□ 1.35
LIMD2-209ENST00000580222 UQCRFS1P1P0C7P4 283 aa23.51■■□□□ 1.35
LIMD2-209ENST00000580222 PHF24Q9UPV7 400 aa23.51■■□□□ 1.35
LIMD2-209ENST00000580222 CLTBP09497 229 aa23.5■■□□□ 1.35
LIMD2-209ENST00000580222 ERCC3P19447 782 aa23.5■■□□□ 1.35
LIMD2-209ENST00000580222 USP14P54578 494 aa23.5■■□□□ 1.35
LIMD2-209ENST00000580222 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.49■■□□□ 1.35
LIMD2-209ENST00000580222 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.49■■□□□ 1.35
LIMD2-209ENST00000580222 A0A1W2PRG0 241 aa23.49■■□□□ 1.35
LIMD2-209ENST00000580222 HMMRO75330 724 aa23.49■■□□□ 1.35
LIMD2-209ENST00000580222 KIAA1755Q5JYT7 1200 aa23.49■■□□□ 1.35
LIMD2-209ENST00000580222 SPATC1LQ9H0A9 340 aa23.49■■□□□ 1.35
LIMD2-209ENST00000580222 XIRP2A4UGR9 3374 aa23.48■■□□□ 1.35
LIMD2-209ENST00000580222 GRXCR1A8MXD5 290 aa23.48■■□□□ 1.35
LIMD2-209ENST00000580222 STRNO43815 780 aa23.48■■□□□ 1.35
LIMD2-209ENST00000580222 PQBP1O60828 265 aaKnown RBP23.48■■□□□ 1.35
LIMD2-209ENST00000580222 RAG1P15918 1043 aa23.48■■□□□ 1.35
LIMD2-209ENST00000580222 SHMT1P34896 483 aa23.48■■□□□ 1.35
LIMD2-209ENST00000580222 PLA2G5P39877 138 aa23.48■■□□□ 1.35
LIMD2-209ENST00000580222 PBX2P40425 430 aa23.48■■□□□ 1.35
LIMD2-209ENST00000580222 ZAP70P43403 619 aa23.48■■□□□ 1.35
LIMD2-209ENST00000580222 EVX2Q03828 476 aa23.48■■□□□ 1.35
LIMD2-209ENST00000580222 POLA2Q14181 598 aa23.48■■□□□ 1.35
LIMD2-209ENST00000580222 ABCB5Q2M3G0 1257 aa23.48■■□□□ 1.35
LIMD2-209ENST00000580222 CERKLQ49MI3 558 aaPredicted RBP23.48■■□□□ 1.35
LIMD2-209ENST00000580222 MIGA1Q8NAN2 632 aa23.48■■□□□ 1.35
LIMD2-209ENST00000580222 SSH3Q8TE77 659 aa23.48■■□□□ 1.35
LIMD2-209ENST00000580222 TIFAQ96CG3 184 aa23.48■■□□□ 1.35
LIMD2-209ENST00000580222 DBNDD2Q9BQY9 259 aa23.48■■□□□ 1.35
LIMD2-209ENST00000580222 PGK1P00558 417 aa23.47■■□□□ 1.35
LIMD2-209ENST00000580222 TAL1P17542 331 aaPredicted RBP23.47■■□□□ 1.35
LIMD2-209ENST00000580222 FPGSQ05932 587 aa23.47■■□□□ 1.35
LIMD2-209ENST00000580222 C16orf59Q7L2K0 433 aa23.47■■□□□ 1.35
LIMD2-209ENST00000580222 MAML3Q96JK9 1138 aa23.47■■□□□ 1.35
LIMD2-209ENST00000580222 ASB2Q96Q27 587 aa23.47■■□□□ 1.35
LIMD2-209ENST00000580222 SERPINB13Q9UIV8 391 aa23.47■■□□□ 1.35
LIMD2-209ENST00000580222 CYP7A1P22680 504 aa23.46■■□□□ 1.35
LIMD2-209ENST00000580222 PLCD1P51178 756 aa23.46■■□□□ 1.35
LIMD2-209ENST00000580222 FAAP100Q0VG06 881 aa23.46■■□□□ 1.35
LIMD2-209ENST00000580222 ADGRE1Q14246 886 aa23.46■■□□□ 1.35
LIMD2-209ENST00000580222 COG2Q14746 738 aa23.46■■□□□ 1.35
LIMD2-209ENST00000580222 SEPT2Q15019 361 aa23.46■■□□□ 1.35
LIMD2-209ENST00000580222 ADAMTS19Q8TE59 1207 aa23.46■■□□□ 1.35
LIMD2-209ENST00000580222 LENG1Q96BZ8 264 aaPredicted RBP23.46■■□□□ 1.35
LIMD2-209ENST00000580222 PRDM12Q9H4Q4 367 aa23.46■■□□□ 1.35
LIMD2-209ENST00000580222 XPNPEP3Q9NQH7 507 aa23.46■■□□□ 1.35
LIMD2-209ENST00000580222 TMEM39AQ9NV64 488 aa23.46■■□□□ 1.35
LIMD2-209ENST00000580222 PCDHB15Q9Y5E8 787 aa23.46■■□□□ 1.35
LIMD2-209ENST00000580222 CHD7Q9P2D1 2997 aa23.46■■□□□ 1.35
LIMD2-209ENST00000580222 TTC39AQ5SRH9 613 aa23.45■■□□□ 1.34
LIMD2-209ENST00000580222 SIRT2Q8IXJ6 389 aa23.45■■□□□ 1.34
LIMD2-209ENST00000580222 SHCBP1Q8NEM2 672 aa23.45■■□□□ 1.34
LIMD2-209ENST00000580222 ATXN2LQ8WWM7 1075 aaKnown RBP23.45■■□□□ 1.34
LIMD2-209ENST00000580222 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.45■■□□□ 1.34
LIMD2-209ENST00000580222 EHD4Q9H223 541 aa23.45■■□□□ 1.34
LIMD2-209ENST00000580222 REV3LO60673 3130 aa23.45■■□□□ 1.34
LIMD2-209ENST00000580222 A0A1W2PQ45 241 aaPredicted RBP23.44■■□□□ 1.34
LIMD2-209ENST00000580222 A0A1W2PQY0 241 aa23.44■■□□□ 1.34
LIMD2-209ENST00000580222 G3BP1Q13283 466 aaKnown RBP eCLIP23.44■■□□□ 1.34
LIMD2-209ENST00000580222 HOXC10Q9NYD6 342 aa23.44■■□□□ 1.34
LIMD2-209ENST00000580222 CDK5RAP2Q96SN8 1893 aa23.44■■□□□ 1.34
LIMD2-209ENST00000580222 MAP3K12Q12852 859 aa23.43■■□□□ 1.34
LIMD2-209ENST00000580222 CCDC85BQ15834 202 aaPredicted RBP23.43■■□□□ 1.34
LIMD2-209ENST00000580222 PBX4Q9BYU1 374 aa23.43■■□□□ 1.34
LIMD2-209ENST00000580222 USP5P45974 858 aa23.42■■□□□ 1.34
LIMD2-209ENST00000580222 OS9Q13438 667 aaPredicted RBP23.42■■□□□ 1.34
LIMD2-209ENST00000580222 TNNI3KQ59H18 835 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms