RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 PPM1FP49593 454 aaPredicted RBP16.9■□□□□ 0.3
ITGB4-206ENST00000579662 TXNDC16Q9P2K2 825 aa16.89■□□□□ 0.3
ITGB4-206ENST00000579662 SWAP70Q9UH65 585 aa16.89■□□□□ 0.3
ITGB4-206ENST00000579662 THRAP3Q9Y2W1 955 aaKnown RBP16.89■□□□□ 0.3
ITGB4-206ENST00000579662 PHKA1P46020 1223 aa16.89■□□□□ 0.29
ITGB4-206ENST00000579662 CERKLQ49MI3 558 aaPredicted RBP16.89■□□□□ 0.29
ITGB4-206ENST00000579662 MCF2L2Q86YR7 1114 aa16.89■□□□□ 0.29
ITGB4-206ENST00000579662 NOD1Q9Y239 953 aa16.89■□□□□ 0.29
ITGB4-206ENST00000579662 CMA1P23946 247 aa16.89■□□□□ 0.29
ITGB4-206ENST00000579662 TAF12Q16514 161 aa16.89■□□□□ 0.29
ITGB4-206ENST00000579662 CFAP58Q5T655 872 aa16.89■□□□□ 0.29
ITGB4-206ENST00000579662 NEK8Q86SG6 692 aa16.89■□□□□ 0.29
ITGB4-206ENST00000579662 ZBTB1Q9Y2K1 713 aa16.89■□□□□ 0.29
ITGB4-206ENST00000579662 CSADQ9Y600 493 aa16.89■□□□□ 0.29
ITGB4-206ENST00000579662 TSPOAP1O95153 1857 aa16.89■□□□□ 0.29
ITGB4-206ENST00000579662 PPEF1O14829 653 aaPredicted RBP16.89■□□□□ 0.29
ITGB4-206ENST00000579662 FLOT1O75955 427 aa16.89■□□□□ 0.29
ITGB4-206ENST00000579662 FAM196AQ6ZSG2 479 aa16.89■□□□□ 0.29
ITGB4-206ENST00000579662 PALD1Q9ULE6 856 aa16.89■□□□□ 0.29
ITGB4-206ENST00000579662 MTMR6Q9Y217 621 aa16.89■□□□□ 0.29
ITGB4-206ENST00000579662 hCG_1642624A0A1W2PR95 340 aa16.88■□□□□ 0.29
ITGB4-206ENST00000579662 ATP5DP30049 168 aa16.88■□□□□ 0.29
ITGB4-206ENST00000579662 MIER3Q7Z3K6 550 aa16.88■□□□□ 0.29
ITGB4-206ENST00000579662 SYCE1Q8N0S2 351 aa16.88■□□□□ 0.29
ITGB4-206ENST00000579662 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.88■□□□□ 0.29
ITGB4-206ENST00000579662 V9GYY5 206 aaPredicted RBP16.88■□□□□ 0.29
ITGB4-206ENST00000579662 SELENOSQ9BQE4 189 aa16.88■□□□□ 0.29
ITGB4-206ENST00000579662 AGTPBP1Q9UPW5 1226 aa16.88■□□□□ 0.29
ITGB4-206ENST00000579662 KLRF2D3W0D1 207 aa16.88■□□□□ 0.29
ITGB4-206ENST00000579662 POLR2MP0CAP2 368 aa16.88■□□□□ 0.29
ITGB4-206ENST00000579662 EVCP57679 992 aa16.88■□□□□ 0.29
ITGB4-206ENST00000579662 ATRIPQ8WXE1 791 aa16.88■□□□□ 0.29
ITGB4-206ENST00000579662 KIAA1468Q9P260 1216 aa16.88■□□□□ 0.29
ITGB4-206ENST00000579662 ACTN4O43707 911 aaKnown RBP16.88■□□□□ 0.29
ITGB4-206ENST00000579662 OR52Z1P0C646 297 aa16.88■□□□□ 0.29
ITGB4-206ENST00000579662 CCDC17Q96LX7 622 aa16.88■□□□□ 0.29
ITGB4-206ENST00000579662 PNOCQ13519 176 aa16.88■□□□□ 0.29
ITGB4-206ENST00000579662 SFMBT2Q5VUG0 894 aa16.88■□□□□ 0.29
ITGB4-206ENST00000579662 PDIA3P30101 505 aaKnown RBP16.87■□□□□ 0.29
ITGB4-206ENST00000579662 KRT9P35527 623 aa16.87■□□□□ 0.29
ITGB4-206ENST00000579662 ICA1Q05084 483 aa16.87■□□□□ 0.29
ITGB4-206ENST00000579662 CCDC117Q8IWD4 279 aaPredicted RBP16.87■□□□□ 0.29
ITGB4-206ENST00000579662 GOLGA5Q8TBA6 731 aa16.87■□□□□ 0.29
ITGB4-206ENST00000579662 MAGEF1Q9HAY2 307 aa16.87■□□□□ 0.29
ITGB4-206ENST00000579662 GAS8O95995 478 aa16.87■□□□□ 0.29
ITGB4-206ENST00000579662 ERCC5P28715 1186 aaPredicted RBP16.87■□□□□ 0.29
ITGB4-206ENST00000579662 NBPF11Q86T75 865 aa16.87■□□□□ 0.29
ITGB4-206ENST00000579662 C8orf74Q6P047 294 aa16.87■□□□□ 0.29
ITGB4-206ENST00000579662 TICAM2Q86XR7 235 aa16.87■□□□□ 0.29
ITGB4-206ENST00000579662 PUS3Q9BZE2 481 aaKnown RBP16.87■□□□□ 0.29
ITGB4-206ENST00000579662 BLZF1Q9H2G9 400 aa16.87■□□□□ 0.29
ITGB4-206ENST00000579662 SLC5A4Q9NY91 659 aa16.87■□□□□ 0.29
ITGB4-206ENST00000579662 PCDHB13Q9Y5F0 798 aa16.87■□□□□ 0.29
ITGB4-206ENST00000579662 FAM169AQ9Y6X4 670 aa16.87■□□□□ 0.29
ITGB4-206ENST00000579662 YWHAEP62258 255 aaKnown RBP16.87■□□□□ 0.29
ITGB4-206ENST00000579662 FBXO11Q86XK2 927 aa16.87■□□□□ 0.29
ITGB4-206ENST00000579662 CCDC63Q8NA47 563 aa16.87■□□□□ 0.29
ITGB4-206ENST00000579662 ZNF408Q9H9D4 720 aa16.87■□□□□ 0.29
ITGB4-206ENST00000579662 H0YCG3 227 aa16.86■□□□□ 0.29
ITGB4-206ENST00000579662 NDC80O14777 642 aa16.86■□□□□ 0.29
ITGB4-206ENST00000579662 ADORA1P30542 326 aa16.86■□□□□ 0.29
ITGB4-206ENST00000579662 TRIM6Q9C030 488 aaPredicted RBP16.86■□□□□ 0.29
ITGB4-206ENST00000579662 KLHL30Q0D2K2 578 aa16.86■□□□□ 0.29
ITGB4-206ENST00000579662 USP28Q96RU2 1077 aa16.86■□□□□ 0.29
ITGB4-206ENST00000579662 BBOX1O75936 387 aa16.86■□□□□ 0.29
ITGB4-206ENST00000579662 LONP1P36776 959 aaKnown RBP16.86■□□□□ 0.29
ITGB4-206ENST00000579662 KRT26Q7Z3Y9 468 aa16.86■□□□□ 0.29
ITGB4-206ENST00000579662 TPH2Q8IWU9 490 aa16.86■□□□□ 0.29
ITGB4-206ENST00000579662 NELFCDQ8IXH7 590 aa16.86■□□□□ 0.29
ITGB4-206ENST00000579662 FOSP01100 380 aaPredicted RBP16.86■□□□□ 0.29
ITGB4-206ENST00000579662 MAGEA1P43355 309 aa16.86■□□□□ 0.29
ITGB4-206ENST00000579662 PABPC4Q13310 644 aaKnown RBP eCLIP16.86■□□□□ 0.29
ITGB4-206ENST00000579662 MSL1Q68DK7 614 aa16.86■□□□□ 0.29
ITGB4-206ENST00000579662 LAD1O00515 517 aa16.86■□□□□ 0.29
ITGB4-206ENST00000579662 INF2Q27J81 1249 aa16.86■□□□□ 0.29
ITGB4-206ENST00000579662 GPBP1Q86WP2 473 aa16.86■□□□□ 0.29
ITGB4-206ENST00000579662 MYOCDQ8IZQ8 938 aa16.86■□□□□ 0.29
ITGB4-206ENST00000579662 FBF1Q8TES7 1133 aa16.86■□□□□ 0.29
ITGB4-206ENST00000579662 TBC1D7Q9P0N9 293 aa16.86■□□□□ 0.29
ITGB4-206ENST00000579662 UNC13BO14795 1591 aa16.85■□□□□ 0.29
ITGB4-206ENST00000579662 PTCH1Q13635 1447 aa16.85■□□□□ 0.29
ITGB4-206ENST00000579662 ADD1P35611 737 aaKnown RBP16.85■□□□□ 0.29
ITGB4-206ENST00000579662 MRPS9P82933 396 aaKnown RBP16.85■□□□□ 0.29
ITGB4-206ENST00000579662 CCDC25Q86WR0 208 aa16.85■□□□□ 0.29
ITGB4-206ENST00000579662 CDC42BPAQ5VT25 1732 aa16.85■□□□□ 0.29
ITGB4-206ENST00000579662 FRMPD2Q68DX3 1309 aaPredicted RBP16.85■□□□□ 0.29
ITGB4-206ENST00000579662 GTPBP6O43824 516 aaPredicted RBP16.85■□□□□ 0.29
ITGB4-206ENST00000579662 ALDH3A1P30838 453 aa16.85■□□□□ 0.29
ITGB4-206ENST00000579662 NT5C2P49902 561 aa16.85■□□□□ 0.29
ITGB4-206ENST00000579662 ARHGEF16Q5VV41 709 aa16.85■□□□□ 0.29
ITGB4-206ENST00000579662 CEP63Q96MT8 703 aa16.85■□□□□ 0.29
ITGB4-206ENST00000579662 QTRT2Q9H974 415 aaKnown RBP16.85■□□□□ 0.29
ITGB4-206ENST00000579662 TRAPPC10P48553 1259 aa16.85■□□□□ 0.29
ITGB4-206ENST00000579662 ASPRV1Q53RT3 343 aa16.85■□□□□ 0.29
ITGB4-206ENST00000579662 ZNF772Q68DY9 489 aaPredicted RBP16.85■□□□□ 0.29
ITGB4-206ENST00000579662 MAEAQ7L5Y9 396 aa16.85■□□□□ 0.29
ITGB4-206ENST00000579662 UTP11Q9Y3A2 253 aaKnown RBP16.85■□□□□ 0.29
ITGB4-206ENST00000579662 hCG_1984214I3L0E3 225 aa16.85■□□□□ 0.29
ITGB4-206ENST00000579662 DOK7Q18PE1 504 aa16.85■□□□□ 0.29
ITGB4-206ENST00000579662 CROCCP2Q86T23 111 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms