RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 ZCCHC17Q9NP64 241 aaKnown RBP18.31■□□□□ 0.52
SLC6A4-205ENST00000579221 AGTPBP1Q9UPW5 1226 aa18.31■□□□□ 0.52
SLC6A4-205ENST00000579221 LAMA4Q16363 1823 aa18.3■□□□□ 0.52
SLC6A4-205ENST00000579221 MYH8P13535 1937 aa18.3■□□□□ 0.52
SLC6A4-205ENST00000579221 IGF2BP3O00425 579 aaKnown RBP eCLIP18.3■□□□□ 0.52
SLC6A4-205ENST00000579221 IFIT3O14879 490 aaKnown RBP18.3■□□□□ 0.52
SLC6A4-205ENST00000579221 RAD21O60216 631 aa18.3■□□□□ 0.52
SLC6A4-205ENST00000579221 TOP1P11387 765 aaKnown RBP18.3■□□□□ 0.52
SLC6A4-205ENST00000579221 GPAT2Q6NUI2 795 aa18.3■□□□□ 0.52
SLC6A4-205ENST00000579221 ANKS1AQ92625 1134 aa18.3■□□□□ 0.52
SLC6A4-205ENST00000579221 LPAR1Q92633 364 aa18.3■□□□□ 0.52
SLC6A4-205ENST00000579221 MTA3Q9BTC8 594 aa18.3■□□□□ 0.52
SLC6A4-205ENST00000579221 SLC45A1Q9Y2W3 748 aa18.3■□□□□ 0.52
SLC6A4-205ENST00000579221 TNKSO95271 1327 aa18.29■□□□□ 0.52
SLC6A4-205ENST00000579221 F5H6K3 240 aa18.29■□□□□ 0.52
SLC6A4-205ENST00000579221 PDHXO00330 501 aa18.29■□□□□ 0.52
SLC6A4-205ENST00000579221 OSBPP22059 807 aa18.29■□□□□ 0.52
SLC6A4-205ENST00000579221 KLRC3Q07444 240 aa18.29■□□□□ 0.52
SLC6A4-205ENST00000579221 DGKZQ13574 1117 aa18.29■□□□□ 0.52
SLC6A4-205ENST00000579221 ADCK5Q3MIX3 580 aa18.29■□□□□ 0.52
SLC6A4-205ENST00000579221 DHX32Q7L7V1 743 aaKnown RBP18.29■□□□□ 0.52
SLC6A4-205ENST00000579221 FAM43AQ8N2R8 423 aa18.29■□□□□ 0.52
SLC6A4-205ENST00000579221 TMEM47Q9BQJ4 181 aa18.29■□□□□ 0.52
SLC6A4-205ENST00000579221 UPF2Q9HAU5 1272 aaKnown RBP18.29■□□□□ 0.52
SLC6A4-205ENST00000579221 RNF186Q9NXI6 227 aa18.29■□□□□ 0.52
SLC6A4-205ENST00000579221 USP17L15C9J2P7 530 aa18.28■□□□□ 0.52
SLC6A4-205ENST00000579221 USP17L13C9JLJ4 530 aa18.28■□□□□ 0.52
SLC6A4-205ENST00000579221 USP17L11C9JVI0 530 aa18.28■□□□□ 0.52
SLC6A4-205ENST00000579221 USP17L18D6R9N7 530 aa18.28■□□□□ 0.52
SLC6A4-205ENST00000579221 USP17L22D6RA61 530 aa18.28■□□□□ 0.52
SLC6A4-205ENST00000579221 USP17L17D6RBQ6 530 aa18.28■□□□□ 0.52
SLC6A4-205ENST00000579221 USP17L19D6RCP7 530 aa18.28■□□□□ 0.52
SLC6A4-205ENST00000579221 USP17L20D6RJB6 530 aa18.28■□□□□ 0.52
SLC6A4-205ENST00000579221 PRC1O43663 620 aa18.28■□□□□ 0.52
SLC6A4-205ENST00000579221 HOXA7P31268 230 aaPredicted RBP18.28■□□□□ 0.52
SLC6A4-205ENST00000579221 USP17L24Q0WX57 530 aa18.28■□□□□ 0.52
SLC6A4-205ENST00000579221 TREML2Q5T2D2 321 aa18.28■□□□□ 0.52
SLC6A4-205ENST00000579221 IFIT1BQ5T764 474 aaKnown RBP18.28■□□□□ 0.52
SLC6A4-205ENST00000579221 RCSD1Q6JBY9 416 aa18.28■□□□□ 0.52
SLC6A4-205ENST00000579221 CHST3Q7LGC8 479 aa18.28■□□□□ 0.52
SLC6A4-205ENST00000579221 LRRC47Q8N1G4 583 aaKnown RBP18.28■□□□□ 0.52
SLC6A4-205ENST00000579221 TMTC2Q8N394 836 aa18.28■□□□□ 0.52
SLC6A4-205ENST00000579221 ENAHQ8N8S7 591 aaPredicted RBP18.28■□□□□ 0.52
SLC6A4-205ENST00000579221 GMCL1P1Q8NEA9 526 aa18.28■□□□□ 0.52
SLC6A4-205ENST00000579221 TMEM87BQ96K49 555 aa18.28■□□□□ 0.52
SLC6A4-205ENST00000579221 JAKMIP1Q96N16 626 aaKnown RBP18.28■□□□□ 0.52
SLC6A4-205ENST00000579221 KAT14Q9H8E8 782 aa18.28■□□□□ 0.52
SLC6A4-205ENST00000579221 WBP1LQ9NX94 342 aa18.28■□□□□ 0.52
SLC6A4-205ENST00000579221 PNMA3Q9UL41 463 aa18.28■□□□□ 0.52
SLC6A4-205ENST00000579221 PHIPQ8WWQ0 1821 aa18.28■□□□□ 0.52
SLC6A4-205ENST00000579221 WDR46O15213 610 aaKnown RBP18.27■□□□□ 0.52
SLC6A4-205ENST00000579221 CA12O43570 354 aa18.27■□□□□ 0.52
SLC6A4-205ENST00000579221 TRPA1O75762 1119 aa18.27■□□□□ 0.52
SLC6A4-205ENST00000579221 VCAM1P19320 739 aa18.27■□□□□ 0.52
SLC6A4-205ENST00000579221 ANTXR2P58335 489 aa18.27■□□□□ 0.52
SLC6A4-205ENST00000579221 ANAPC15P60006 121 aa18.27■□□□□ 0.52
SLC6A4-205ENST00000579221 WTAPQ15007 396 aa18.27■□□□□ 0.52
SLC6A4-205ENST00000579221 SEC23AQ15436 765 aa18.27■□□□□ 0.52
SLC6A4-205ENST00000579221 TMEM67Q5HYA8 995 aa18.27■□□□□ 0.52
SLC6A4-205ENST00000579221 SLFN13Q68D06 897 aa18.27■□□□□ 0.52
SLC6A4-205ENST00000579221 BLOC1S2Q6QNY1 142 aa18.27■□□□□ 0.52
SLC6A4-205ENST00000579221 SPICE1Q8N0Z3 855 aa18.27■□□□□ 0.52
SLC6A4-205ENST00000579221 IGDCC4Q8TDY8 1250 aa18.27■□□□□ 0.52
SLC6A4-205ENST00000579221 ZFYVE28Q9HCC9 887 aa18.27■□□□□ 0.52
SLC6A4-205ENST00000579221 WDR19Q8NEZ3 1342 aa18.26■□□□□ 0.51
SLC6A4-205ENST00000579221 NDUFB10O96000 172 aa18.26■□□□□ 0.51
SLC6A4-205ENST00000579221 EXOSC10Q01780 885 aaKnown RBP18.26■□□□□ 0.51
SLC6A4-205ENST00000579221 TAF1CQ15572 869 aaPredicted RBP18.26■□□□□ 0.51
SLC6A4-205ENST00000579221 KIAA1755Q5JYT7 1200 aa18.26■□□□□ 0.51
SLC6A4-205ENST00000579221 CATSPERGQ6ZRH7 1159 aa18.26■□□□□ 0.51
SLC6A4-205ENST00000579221 TM6SF1Q9BZW5 370 aa18.26■□□□□ 0.51
SLC6A4-205ENST00000579221 RPAP3Q9H6T3 665 aaPredicted RBP18.26■□□□□ 0.51
SLC6A4-205ENST00000579221 SAGE1Q9NXZ1 904 aa18.26■□□□□ 0.51
SLC6A4-205ENST00000579221 GREB1LQ9C091 1923 aaPredicted RBP18.25■□□□□ 0.51
SLC6A4-205ENST00000579221 CASTP20810 708 aaKnown RBP18.25■□□□□ 0.51
SLC6A4-205ENST00000579221 IRX3P78415 501 aaPredicted RBP18.25■□□□□ 0.51
SLC6A4-205ENST00000579221 GMCL1Q96IK5 515 aa18.25■□□□□ 0.51
SLC6A4-205ENST00000579221 PARK7Q99497 189 aaKnown RBP18.25■□□□□ 0.51
SLC6A4-205ENST00000579221 BACH2Q9BYV9 841 aa18.25■□□□□ 0.51
SLC6A4-205ENST00000579221 TBC1D8O95759 1140 aa18.24■□□□□ 0.51
SLC6A4-205ENST00000579221 BMP3P12645 472 aa18.24■□□□□ 0.51
SLC6A4-205ENST00000579221 SLC1A4P43007 532 aa18.24■□□□□ 0.51
SLC6A4-205ENST00000579221 PNMA1Q8ND90 353 aa18.24■□□□□ 0.51
SLC6A4-205ENST00000579221 DCAF4Q8WV16 495 aa18.24■□□□□ 0.51
SLC6A4-205ENST00000579221 CFHR5Q9BXR6 569 aa18.24■□□□□ 0.51
SLC6A4-205ENST00000579221 C22orf23Q9BZE7 217 aa18.24■□□□□ 0.51
SLC6A4-205ENST00000579221 TANGO6Q9C0B7 1094 aa18.24■□□□□ 0.51
SLC6A4-205ENST00000579221 ASCC2Q9H1I8 757 aaPredicted RBP18.24■□□□□ 0.51
SLC6A4-205ENST00000579221 ZSWIM6Q9HCJ5 1215 aa18.24■□□□□ 0.51
SLC6A4-205ENST00000579221 HOXC10Q9NYD6 342 aa18.24■□□□□ 0.51
SLC6A4-205ENST00000579221 MTMR7Q9Y216 660 aa18.24■□□□□ 0.51
SLC6A4-205ENST00000579221 CYP46A1Q9Y6A2 500 aa18.24■□□□□ 0.51
SLC6A4-205ENST00000579221 THSD7BQ9C0I4 1608 aa18.23■□□□□ 0.51
SLC6A4-205ENST00000579221 RPS6KB1P23443 525 aa18.23■□□□□ 0.51
SLC6A4-205ENST00000579221 LIFRP42702 1097 aa18.23■□□□□ 0.51
SLC6A4-205ENST00000579221 FGD1P98174 961 aa18.23■□□□□ 0.51
SLC6A4-205ENST00000579221 COG2Q14746 738 aa18.23■□□□□ 0.51
SLC6A4-205ENST00000579221 FAM83BQ5T0W9 1011 aa18.23■□□□□ 0.51
SLC6A4-205ENST00000579221 NFXL1Q6ZNB6 911 aa18.23■□□□□ 0.51
SLC6A4-205ENST00000579221 RUFY3Q7L099 469 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms