RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 SSH3Q8TE77 659 aa4.76□□□□□ -1.65
SMARCE1-215ENST00000578995 MEGF10Q96KG7 1140 aa4.76□□□□□ -1.65
SMARCE1-215ENST00000578995 TRPM7Q96QT4 1865 aa4.76□□□□□ -1.65
SMARCE1-215ENST00000578995 RTFDC1Q9BY42 306 aaPredicted RBP4.76□□□□□ -1.65
SMARCE1-215ENST00000578995 HMX1Q9NP08 348 aaPredicted RBP4.76□□□□□ -1.65
SMARCE1-215ENST00000578995 PIM2Q9P1W9 311 aa4.76□□□□□ -1.65
SMARCE1-215ENST00000578995 ATP6V0A2Q9Y487 856 aa4.76□□□□□ -1.65
SMARCE1-215ENST00000578995 SIPA1L1O43166 1804 aa4.76□□□□□ -1.65
SMARCE1-215ENST00000578995 WNT11O96014 354 aa4.75□□□□□ -1.65
SMARCE1-215ENST00000578995 GNAI3P08754 354 aa4.75□□□□□ -1.65
SMARCE1-215ENST00000578995 FBXO45P0C2W1 286 aa4.75□□□□□ -1.65
SMARCE1-215ENST00000578995 UBTFL1P0CB47 393 aaPredicted RBP4.75□□□□□ -1.65
SMARCE1-215ENST00000578995 GRIK1P39086 918 aa4.75□□□□□ -1.65
SMARCE1-215ENST00000578995 CCDC152Q4G0S7 254 aa4.75□□□□□ -1.65
SMARCE1-215ENST00000578995 DALRD3Q5D0E6 543 aaKnown RBP4.75□□□□□ -1.65
SMARCE1-215ENST00000578995 ITPRIPQ8IWB1 547 aa4.75□□□□□ -1.65
SMARCE1-215ENST00000578995 TTLL6Q8N841 843 aa4.75□□□□□ -1.65
SMARCE1-215ENST00000578995 KLHDC4Q8TBB5 520 aa4.75□□□□□ -1.65
SMARCE1-215ENST00000578995 ZNF594Q96JF6 807 aaPredicted RBP4.75□□□□□ -1.65
SMARCE1-215ENST00000578995 CCDC85AQ96PX6 553 aaPredicted RBP4.75□□□□□ -1.65
SMARCE1-215ENST00000578995 CRBNQ96SW2 442 aa4.75□□□□□ -1.65
SMARCE1-215ENST00000578995 PUS3Q9BZE2 481 aaKnown RBP4.75□□□□□ -1.65
SMARCE1-215ENST00000578995 C1orf115Q9H7X2 142 aa4.75□□□□□ -1.65
SMARCE1-215ENST00000578995 COPRSQ9NQ92 184 aa4.75□□□□□ -1.65
SMARCE1-215ENST00000578995 PODXL2Q9NZ53 605 aa4.75□□□□□ -1.65
SMARCE1-215ENST00000578995 C9orf78Q9NZ63 289 aaPredicted RBP4.75□□□□□ -1.65
SMARCE1-215ENST00000578995 PPP1R1BQ9UD71 204 aaPredicted RBP4.75□□□□□ -1.65
SMARCE1-215ENST00000578995 ADGRE2Q9UHX3 823 aa4.75□□□□□ -1.65
SMARCE1-215ENST00000578995 WWC3Q9ULE0 1092 aa4.75□□□□□ -1.65
SMARCE1-215ENST00000578995 RIPOR2Q9Y4F9 1068 aa4.75□□□□□ -1.65
SMARCE1-215ENST00000578995 SUPT16HQ9Y5B9 1047 aaKnown RBP4.75□□□□□ -1.65
SMARCE1-215ENST00000578995 OTOFQ9HC10 1997 aa4.74□□□□□ -1.65
SMARCE1-215ENST00000578995 C21orf2O43822 256 aa4.74□□□□□ -1.65
SMARCE1-215ENST00000578995 BBOX1O75936 387 aa4.74□□□□□ -1.65
SMARCE1-215ENST00000578995 SASH1O94885 1247 aa4.74□□□□□ -1.65
SMARCE1-215ENST00000578995 TGFB1P01137 390 aa4.74□□□□□ -1.65
SMARCE1-215ENST00000578995 GNAI2P04899 355 aa4.74□□□□□ -1.65
SMARCE1-215ENST00000578995 SPINK2P20155 84 aa4.74□□□□□ -1.65
SMARCE1-215ENST00000578995 FGFR2P21802 821 aa4.74□□□□□ -1.65
SMARCE1-215ENST00000578995 KLRK1P26718 216 aa4.74□□□□□ -1.65
SMARCE1-215ENST00000578995 ALDH1B1P30837 517 aa4.74□□□□□ -1.65
SMARCE1-215ENST00000578995 RPS8P62241 208 aaKnown RBP4.74□□□□□ -1.65
SMARCE1-215ENST00000578995 GPSM2P81274 684 aa4.74□□□□□ -1.65
SMARCE1-215ENST00000578995 ATP8B2P98198 1209 aa4.74□□□□□ -1.65
SMARCE1-215ENST00000578995 LRRC24Q50LG9 513 aa4.74□□□□□ -1.65
SMARCE1-215ENST00000578995 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.74□□□□□ -1.65
SMARCE1-215ENST00000578995 SP8Q8IXZ3 490 aa4.74□□□□□ -1.65
SMARCE1-215ENST00000578995 FTSJ3Q8IY81 847 aaKnown RBP4.74□□□□□ -1.65
SMARCE1-215ENST00000578995 DTWD1Q8N5C7 304 aa4.74□□□□□ -1.65
SMARCE1-215ENST00000578995 RPGRQ92834 1020 aaKnown RBP4.74□□□□□ -1.65
SMARCE1-215ENST00000578995 ZNF622Q969S3 477 aaKnown RBP eCLIP4.74□□□□□ -1.65
SMARCE1-215ENST00000578995 RBM17Q96I25 401 aaKnown RBP4.74□□□□□ -1.65
SMARCE1-215ENST00000578995 PSMD1Q99460 953 aa4.74□□□□□ -1.65
SMARCE1-215ENST00000578995 ETNK1Q9HBU6 452 aa4.74□□□□□ -1.65
SMARCE1-215ENST00000578995 JPH1Q9HDC5 661 aaPredicted RBP4.74□□□□□ -1.65
SMARCE1-215ENST00000578995 BSDC1Q9NW68 430 aaPredicted RBP4.74□□□□□ -1.65
SMARCE1-215ENST00000578995 POLLQ9UGP5 575 aa4.74□□□□□ -1.65
SMARCE1-215ENST00000578995 DDX19BQ9UMR2 479 aa4.74□□□□□ -1.65
SMARCE1-215ENST00000578995 MINPP1Q9UNW1 487 aa4.74□□□□□ -1.65
SMARCE1-215ENST00000578995 PA2G4Q9UQ80 394 aaKnown RBP4.74□□□□□ -1.65
SMARCE1-215ENST00000578995 BCS1LQ9Y276 419 aa4.74□□□□□ -1.65
SMARCE1-215ENST00000578995 NOP58Q9Y2X3 529 aaKnown RBP4.74□□□□□ -1.65
SMARCE1-215ENST00000578995 MED23Q9ULK4 1368 aa4.74□□□□□ -1.65
SMARCE1-215ENST00000578995 LAMA4Q16363 1823 aa4.74□□□□□ -1.65
SMARCE1-215ENST00000578995 MYH1P12882 1939 aa4.74□□□□□ -1.65
SMARCE1-215ENST00000578995 MYH8P13535 1937 aa4.74□□□□□ -1.65
SMARCE1-215ENST00000578995 NAV1Q8NEY1 1877 aa4.73□□□□□ -1.65
SMARCE1-215ENST00000578995 ANKRD18BA2A2Z9 1011 aa4.73□□□□□ -1.65
SMARCE1-215ENST00000578995 SNAP23O00161 211 aa4.73□□□□□ -1.65
SMARCE1-215ENST00000578995 EYA2O00167 538 aa4.73□□□□□ -1.65
SMARCE1-215ENST00000578995 ADAMTS4O75173 837 aa4.73□□□□□ -1.65
SMARCE1-215ENST00000578995 CIAO1O76071 339 aa4.73□□□□□ -1.65
SMARCE1-215ENST00000578995 USP17L8P0C7I0 530 aa4.73□□□□□ -1.65
SMARCE1-215ENST00000578995 HSP90B1P14625 803 aaKnown RBP4.73□□□□□ -1.65
SMARCE1-215ENST00000578995 FKBP4Q02790 459 aaKnown RBP eCLIP4.73□□□□□ -1.65
SMARCE1-215ENST00000578995 CHRNDQ07001 517 aa4.73□□□□□ -1.65
SMARCE1-215ENST00000578995 CCDC93Q567U6 631 aa4.73□□□□□ -1.65
SMARCE1-215ENST00000578995 C15orf52Q6ZUT6 534 aaKnown RBP4.73□□□□□ -1.65
SMARCE1-215ENST00000578995 DDX46Q7L014 1031 aaKnown RBP4.73□□□□□ -1.65
SMARCE1-215ENST00000578995 TMC4Q7Z404 712 aa4.73□□□□□ -1.65
SMARCE1-215ENST00000578995 ANKRD18AQ8IVF6 992 aa4.73□□□□□ -1.65
SMARCE1-215ENST00000578995 DMRTC2Q8IXT2 367 aaPredicted RBP4.73□□□□□ -1.65
SMARCE1-215ENST00000578995 EXOC6Q8TAG9 804 aa4.73□□□□□ -1.65
SMARCE1-215ENST00000578995 TBC1D16Q8TBP0 767 aa4.73□□□□□ -1.65
SMARCE1-215ENST00000578995 GPR101Q96P66 508 aaPredicted RBP4.73□□□□□ -1.65
SMARCE1-215ENST00000578995 SLC30A3Q99726 388 aa4.73□□□□□ -1.65
SMARCE1-215ENST00000578995 ATAD5Q96QE3 1844 aa4.73□□□□□ -1.65
SMARCE1-215ENST00000578995 BAZ2AQ9UIF9 1905 aaKnown RBP4.73□□□□□ -1.65
SMARCE1-215ENST00000578995 ZNF804BA4D1E1 1349 aa4.72□□□□□ -1.65
SMARCE1-215ENST00000578995 XDHP47989 1333 aa4.72□□□□□ -1.65
SMARCE1-215ENST00000578995 SALL3Q9BXA9 1300 aa4.72□□□□□ -1.65
SMARCE1-215ENST00000578995 PHIPQ8WWQ0 1821 aa4.72□□□□□ -1.65
SMARCE1-215ENST00000578995 YDJCA8MPS7 323 aa4.72□□□□□ -1.65
SMARCE1-215ENST00000578995 SRGAP3O43295 1099 aa4.72□□□□□ -1.65
SMARCE1-215ENST00000578995 IGLV1-40P01703 118 aa4.72□□□□□ -1.65
SMARCE1-215ENST00000578995 KIAA2012Q0VF49 1180 aa4.72□□□□□ -1.65
SMARCE1-215ENST00000578995 IFIT5Q13325 482 aaKnown RBP4.72□□□□□ -1.65
SMARCE1-215ENST00000578995 IGF2-ASQ6U949 168 aa4.72□□□□□ -1.65
SMARCE1-215ENST00000578995 RPAP2Q8IXW5 612 aaPredicted RBP4.72□□□□□ -1.65
SMARCE1-215ENST00000578995 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms