RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 ME3Q16798 604 aa16.27■□□□□ 0.2
CSNK1D-209ENST00000578904 CCDC84Q86UT8 332 aaPredicted RBP16.27■□□□□ 0.2
CSNK1D-209ENST00000578904 ERO1BQ86YB8 467 aa16.27■□□□□ 0.2
CSNK1D-209ENST00000578904 RASAL3Q86YV0 1011 aa16.27■□□□□ 0.2
CSNK1D-209ENST00000578904 OPTNQ96CV9 577 aa16.27■□□□□ 0.2
CSNK1D-209ENST00000578904 LLPHQ9BRT6 129 aaKnown RBP16.27■□□□□ 0.2
CSNK1D-209ENST00000578904 LY9Q9HBG7 655 aa16.27■□□□□ 0.2
CSNK1D-209ENST00000578904 GREB1LQ9C091 1923 aaPredicted RBP16.26■□□□□ 0.19
CSNK1D-209ENST00000578904 MYH4Q9Y623 1939 aa16.26■□□□□ 0.19
CSNK1D-209ENST00000578904 RASSF10A6NK89 507 aa16.26■□□□□ 0.19
CSNK1D-209ENST00000578904 GOLGA8BA8MQT2 603 aa16.26■□□□□ 0.19
CSNK1D-209ENST00000578904 CPLX1O14810 134 aa16.26■□□□□ 0.19
CSNK1D-209ENST00000578904 CDKL5O76039 1030 aa16.26■□□□□ 0.19
CSNK1D-209ENST00000578904 GUCY1A2P33402 732 aa16.26■□□□□ 0.19
CSNK1D-209ENST00000578904 ICA1Q05084 483 aa16.26■□□□□ 0.19
CSNK1D-209ENST00000578904 PPATQ06203 517 aa16.26■□□□□ 0.19
CSNK1D-209ENST00000578904 GRM1Q13255 1194 aa16.26■□□□□ 0.19
CSNK1D-209ENST00000578904 DEFB115Q30KQ5 88 aa16.26■□□□□ 0.19
CSNK1D-209ENST00000578904 CNKSR2Q8WXI2 1034 aa16.26■□□□□ 0.19
CSNK1D-209ENST00000578904 WNK4Q96J92 1243 aa16.26■□□□□ 0.19
CSNK1D-209ENST00000578904 ZKSCAN3Q9BRR0 538 aa16.26■□□□□ 0.19
CSNK1D-209ENST00000578904 KAT14Q9H8E8 782 aa16.26■□□□□ 0.19
CSNK1D-209ENST00000578904 AS3MTQ9HBK9 375 aa16.26■□□□□ 0.19
CSNK1D-209ENST00000578904 CIZ1Q9ULV3 898 aaPredicted RBP16.26■□□□□ 0.19
CSNK1D-209ENST00000578904 SMC3Q9UQE7 1217 aa16.26■□□□□ 0.19
CSNK1D-209ENST00000578904 ZHX2Q9Y6X8 837 aa16.26■□□□□ 0.19
CSNK1D-209ENST00000578904 SLC10A3P09131 477 aa16.25■□□□□ 0.19
CSNK1D-209ENST00000578904 PDIA3P30101 505 aaKnown RBP16.25■□□□□ 0.19
CSNK1D-209ENST00000578904 METAP2P50579 478 aaKnown RBP eCLIP16.25■□□□□ 0.191e-7■■■□□ 15.7
CSNK1D-209ENST00000578904 MKRN3Q13064 507 aaKnown RBP16.25■□□□□ 0.19
CSNK1D-209ENST00000578904 PPIL2Q13356 520 aa16.25■□□□□ 0.19
CSNK1D-209ENST00000578904 SEC23AQ15436 765 aa16.25■□□□□ 0.19
CSNK1D-209ENST00000578904 CYP4F22Q6NT55 531 aa16.25■□□□□ 0.19
CSNK1D-209ENST00000578904 APOA5Q6Q788 366 aa16.25■□□□□ 0.19
CSNK1D-209ENST00000578904 CLEC10AQ8IUN9 316 aa16.25■□□□□ 0.19
CSNK1D-209ENST00000578904 CCDC83Q8IWF9 413 aa16.25■□□□□ 0.19
CSNK1D-209ENST00000578904 ENAHQ8N8S7 591 aaPredicted RBP16.25■□□□□ 0.19
CSNK1D-209ENST00000578904 SPRYD3Q8NCJ5 442 aa16.25■□□□□ 0.19
CSNK1D-209ENST00000578904 ANKS1AQ92625 1134 aa16.25■□□□□ 0.19
CSNK1D-209ENST00000578904 GTF3C6Q969F1 213 aa16.25■□□□□ 0.19
CSNK1D-209ENST00000578904 LARP6Q9BRS8 491 aaKnown RBP16.25■□□□□ 0.19
CSNK1D-209ENST00000578904 MYH6P13533 1939 aa16.24■□□□□ 0.19
CSNK1D-209ENST00000578904 DDAH1O94760 285 aa16.24■□□□□ 0.19
CSNK1D-209ENST00000578904 ZBTB48P10074 688 aaPredicted RBP16.24■□□□□ 0.19
CSNK1D-209ENST00000578904 GJA5P36382 358 aa16.24■□□□□ 0.19
CSNK1D-209ENST00000578904 HMGN5P82970 282 aaKnown RBP16.24■□□□□ 0.19
CSNK1D-209ENST00000578904 ATP2B2Q01814 1243 aa16.24■□□□□ 0.19
CSNK1D-209ENST00000578904 STK3Q13188 491 aa16.24■□□□□ 0.19
CSNK1D-209ENST00000578904 SPRYD7Q5W111 196 aa16.24■□□□□ 0.19
CSNK1D-209ENST00000578904 NKX2-3Q8TAU0 364 aa16.24■□□□□ 0.19
CSNK1D-209ENST00000578904 CCDC102AQ96A19 550 aa16.24■□□□□ 0.19
CSNK1D-209ENST00000578904 CEP95Q96GE4 821 aa16.24■□□□□ 0.19
CSNK1D-209ENST00000578904 FEZ1Q99689 392 aa16.24■□□□□ 0.19
CSNK1D-209ENST00000578904 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.24■□□□□ 0.19
CSNK1D-209ENST00000578904 KANSL2Q9H9L4 492 aa16.24■□□□□ 0.19
CSNK1D-209ENST00000578904 ARHGEF10LQ9HCE6 1279 aa16.24■□□□□ 0.19
CSNK1D-209ENST00000578904 RBM28Q9NW13 759 aaKnown RBP16.24■□□□□ 0.19
CSNK1D-209ENST00000578904 IGKV6D-41A0A0C4DH26 115 aa16.23■□□□□ 0.19
CSNK1D-209ENST00000578904 TRIM75PA6NK02 468 aa16.23■□□□□ 0.19
CSNK1D-209ENST00000578904 GOLGA8AA7E2F4 631 aa16.23■□□□□ 0.19
CSNK1D-209ENST00000578904 SLC34A2O95436 690 aa16.23■□□□□ 0.19
CSNK1D-209ENST00000578904 TOP1P11387 765 aaKnown RBP16.23■□□□□ 0.19
CSNK1D-209ENST00000578904 PDCP20941 246 aa16.23■□□□□ 0.19
CSNK1D-209ENST00000578904 KIF5BP33176 963 aa16.23■□□□□ 0.19
CSNK1D-209ENST00000578904 ECE1P42892 770 aa16.23■□□□□ 0.19
CSNK1D-209ENST00000578904 ZNF654Q8IZM8 581 aa16.23■□□□□ 0.19
CSNK1D-209ENST00000578904 ZNF280CQ8ND82 737 aa16.23■□□□□ 0.19
CSNK1D-209ENST00000578904 CTCFLQ8NI51 663 aaPredicted RBP16.23■□□□□ 0.19
CSNK1D-209ENST00000578904 CAPNS2Q96L46 248 aa16.23■□□□□ 0.19
CSNK1D-209ENST00000578904 MAP3K14Q99558 947 aa16.23■□□□□ 0.19
CSNK1D-209ENST00000578904 CHMP5Q9NZZ3 219 aa16.23■□□□□ 0.19
CSNK1D-209ENST00000578904 STX8Q9UNK0 236 aa16.23■□□□□ 0.19
CSNK1D-209ENST00000578904 PHIPQ8WWQ0 1821 aa16.23■□□□□ 0.19
CSNK1D-209ENST00000578904 IRF6O14896 467 aa16.22■□□□□ 0.19
CSNK1D-209ENST00000578904 NMT2O60551 498 aa16.22■□□□□ 0.19
CSNK1D-209ENST00000578904 TTLL1O95922 423 aa16.22■□□□□ 0.19
CSNK1D-209ENST00000578904 GNAQP50148 359 aa16.22■□□□□ 0.19
CSNK1D-209ENST00000578904 NUCB2P80303 420 aa16.22■□□□□ 0.19
CSNK1D-209ENST00000578904 SPP2Q13103 211 aa16.22■□□□□ 0.19
CSNK1D-209ENST00000578904 COL9A3Q14050 684 aaPredicted RBP16.22■□□□□ 0.19
CSNK1D-209ENST00000578904 RTN1Q16799 776 aa16.22■□□□□ 0.19
CSNK1D-209ENST00000578904 MICU3Q86XE3 530 aa16.22■□□□□ 0.19
CSNK1D-209ENST00000578904 NECAB1Q8N987 351 aa16.22■□□□□ 0.19
CSNK1D-209ENST00000578904 FAM184AQ8NB25 1140 aa16.22■□□□□ 0.19
CSNK1D-209ENST00000578904 WDR18Q9BV38 432 aa16.22■□□□□ 0.19
CSNK1D-209ENST00000578904 SH2D4AQ9H788 454 aa16.22■□□□□ 0.19
CSNK1D-209ENST00000578904 MTMR4Q9NYA4 1195 aa16.22■□□□□ 0.19
CSNK1D-209ENST00000578904 BRPF3Q9ULD4 1205 aa16.22■□□□□ 0.19
CSNK1D-209ENST00000578904 AFG3L2Q9Y4W6 797 aa16.22■□□□□ 0.19
CSNK1D-209ENST00000578904 FAM155AB1AL88 458 aaPredicted RBP16.21■□□□□ 0.19
CSNK1D-209ENST00000578904 LARGE1O95461 756 aa16.21■□□□□ 0.19
CSNK1D-209ENST00000578904 EEF2P13639 858 aaKnown RBP16.21■□□□□ 0.19
CSNK1D-209ENST00000578904 CCT2P78371 535 aaKnown RBP16.21■□□□□ 0.19
CSNK1D-209ENST00000578904 SCRN1Q12765 414 aa16.21■□□□□ 0.19
CSNK1D-209ENST00000578904 SNAPC2Q13487 334 aa16.21■□□□□ 0.19
CSNK1D-209ENST00000578904 MTMR2Q13614 643 aa16.21■□□□□ 0.19
CSNK1D-209ENST00000578904 ACER1Q8TDN7 264 aa16.21■□□□□ 0.19
CSNK1D-209ENST00000578904 NUP133Q8WUM0 1156 aa16.21■□□□□ 0.19
CSNK1D-209ENST00000578904 GPHNQ9NQX3 736 aaPredicted RBP16.21■□□□□ 0.19
CSNK1D-209ENST00000578904 IL17RBQ9NRM6 502 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms