RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 DCHS1Q96JQ0 3298 aa13.83□□□□□ -0.2
GGA3-206ENST00000578773 UMODL1Q5DID0 1318 aa13.83□□□□□ -0.2
GGA3-206ENST00000578773 MYADML2A6NDP7 307 aa13.82□□□□□ -0.2
GGA3-206ENST00000578773 SPDYE16A6NNV3 312 aaPredicted RBP13.82□□□□□ -0.2
GGA3-206ENST00000578773 CYP2C18P33260 490 aa13.82□□□□□ -0.2
GGA3-206ENST00000578773 GTF3C2Q8WUA4 911 aaPredicted RBP13.82□□□□□ -0.2
GGA3-206ENST00000578773 MOV10L1Q9BXT6 1211 aaKnown RBP13.82□□□□□ -0.2
GGA3-206ENST00000578773 DCDC2CA8MYV0 355 aa13.81□□□□□ -0.2
GGA3-206ENST00000578773 EYA2O00167 538 aa13.81□□□□□ -0.2
GGA3-206ENST00000578773 APBB1O00213 710 aa13.81□□□□□ -0.2
GGA3-206ENST00000578773 ADAMTS4O75173 837 aa13.81□□□□□ -0.2
GGA3-206ENST00000578773 ALDH1L1O75891 902 aa13.81□□□□□ -0.2
GGA3-206ENST00000578773 ASNSP08243 561 aa13.81□□□□□ -0.2
GGA3-206ENST00000578773 CCNA1P78396 465 aa13.81□□□□□ -0.2
GGA3-206ENST00000578773 ATP2B3Q16720 1220 aa13.81□□□□□ -0.2
GGA3-206ENST00000578773 USP17L2Q6R6M4 530 aa13.81□□□□□ -0.2
GGA3-206ENST00000578773 CATSPERGQ6ZRH7 1159 aa13.81□□□□□ -0.2
GGA3-206ENST00000578773 OTOP2Q7RTS6 562 aa13.81□□□□□ -0.2
GGA3-206ENST00000578773 SH3RF3Q8TEJ3 882 aaPredicted RBP13.81□□□□□ -0.2
GGA3-206ENST00000578773 SRCIN1Q9C0H9 1055 aa13.81□□□□□ -0.2
GGA3-206ENST00000578773 DENND2AQ9ULE3 1009 aa13.81□□□□□ -0.2
GGA3-206ENST00000578773 FANCIQ9NVI1 1328 aa13.81□□□□□ -0.2
GGA3-206ENST00000578773 USP17L15C9J2P7 530 aa13.8□□□□□ -0.2
GGA3-206ENST00000578773 USP17L13C9JLJ4 530 aa13.8□□□□□ -0.2
GGA3-206ENST00000578773 USP17L11C9JVI0 530 aa13.8□□□□□ -0.2
GGA3-206ENST00000578773 USP17L18D6R9N7 530 aa13.8□□□□□ -0.2
GGA3-206ENST00000578773 USP17L22D6RA61 530 aa13.8□□□□□ -0.2
GGA3-206ENST00000578773 USP17L17D6RBQ6 530 aa13.8□□□□□ -0.2
GGA3-206ENST00000578773 USP17L19D6RCP7 530 aa13.8□□□□□ -0.2
GGA3-206ENST00000578773 USP17L20D6RJB6 530 aa13.8□□□□□ -0.2
GGA3-206ENST00000578773 RBAK-RBAKDNI3L0D1 243 aa13.8□□□□□ -0.2
GGA3-206ENST00000578773 NPM3O75607 178 aaKnown RBP13.8□□□□□ -0.2
GGA3-206ENST00000578773 ACLYP53396 1101 aa13.8□□□□□ -0.2
GGA3-206ENST00000578773 USP17L24Q0WX57 530 aa13.8□□□□□ -0.2
GGA3-206ENST00000578773 PSRC1Q6PGN9 363 aaPredicted RBP13.8□□□□□ -0.2
GGA3-206ENST00000578773 PI16Q6UXB8 463 aa13.8□□□□□ -0.2
GGA3-206ENST00000578773 ACER1Q8TDN7 264 aa13.8□□□□□ -0.2
GGA3-206ENST00000578773 VWCEQ96DN2 955 aa13.8□□□□□ -0.2
GGA3-206ENST00000578773 MAML3Q96JK9 1138 aa13.8□□□□□ -0.2
GGA3-206ENST00000578773 TOX2Q96NM4 488 aa13.8□□□□□ -0.2
GGA3-206ENST00000578773 SIL1Q9H173 461 aa13.8□□□□□ -0.2
GGA3-206ENST00000578773 STARD7Q9NQZ5 370 aa13.8□□□□□ -0.2
GGA3-206ENST00000578773 HERC5Q9UII4 1024 aaKnown RBP13.8□□□□□ -0.2
GGA3-206ENST00000578773 KMT2EQ8IZD2 1858 aa13.8□□□□□ -0.2
GGA3-206ENST00000578773 PLXNA3P51805 1871 aa13.79□□□□□ -0.2
GGA3-206ENST00000578773 RARBP10826 455 aa13.79□□□□□ -0.2
GGA3-206ENST00000578773 VCAM1P19320 739 aa13.79□□□□□ -0.2
GGA3-206ENST00000578773 CCDC102BQ68D86 513 aa13.79□□□□□ -0.2
GGA3-206ENST00000578773 CDCA7LQ96GN5 454 aa13.79□□□□□ -0.2
GGA3-206ENST00000578773 C12orf42Q96LP6 360 aa13.79□□□□□ -0.2
GGA3-206ENST00000578773 IL23AQ9NPF7 189 aa13.79□□□□□ -0.2
GGA3-206ENST00000578773 ZNF521Q96K83 1311 aa13.79□□□□□ -0.2
GGA3-206ENST00000578773 GH2P01242 217 aa13.78□□□□□ -0.2
GGA3-206ENST00000578773 ERCC3P19447 782 aa13.78□□□□□ -0.2
GGA3-206ENST00000578773 TBC1D9Q6ZT07 1266 aa13.78□□□□□ -0.2
GGA3-206ENST00000578773 RNF180Q86T96 592 aa13.78□□□□□ -0.2
GGA3-206ENST00000578773 TEX11Q8IYF3 940 aa13.78□□□□□ -0.2
GGA3-206ENST00000578773 HLA-CQ95604 372 aa13.78□□□□□ -0.2
GGA3-206ENST00000578773 COG5Q9UP83 839 aa13.78□□□□□ -0.2
GGA3-206ENST00000578773 SYNRGQ9UMZ2 1314 aa13.78□□□□□ -0.2
GGA3-206ENST00000578773 TET1Q8NFU7 2136 aa13.78□□□□□ -0.2
GGA3-206ENST00000578773 MYO15AQ9UKN7 3530 aa13.77□□□□□ -0.2
GGA3-206ENST00000578773 CA3P07451 260 aa13.77□□□□□ -0.21
GGA3-206ENST00000578773 POU3F3P20264 500 aaPredicted RBP13.77□□□□□ -0.21
GGA3-206ENST00000578773 CDK7P50613 346 aa13.77□□□□□ -0.21
GGA3-206ENST00000578773 EXOSC9Q06265 439 aaKnown RBP13.77□□□□□ -0.21
GGA3-206ENST00000578773 ATG2AQ2TAZ0 1938 aa13.77□□□□□ -0.21
GGA3-206ENST00000578773 CCSAPQ6IQ19 270 aaPredicted RBP13.77□□□□□ -0.21
GGA3-206ENST00000578773 LBX2Q6XYB7 198 aa13.77□□□□□ -0.21
GGA3-206ENST00000578773 MAPKAPK5Q8IW41 473 aa13.77□□□□□ -0.21
GGA3-206ENST00000578773 TMEM199Q8N511 208 aa13.77□□□□□ -0.21
GGA3-206ENST00000578773 RPAP3Q9H6T3 665 aaPredicted RBP13.77□□□□□ -0.21
GGA3-206ENST00000578773 GNL3LQ9NVN8 582 aaKnown RBP13.77□□□□□ -0.21
GGA3-206ENST00000578773 TECTAO75443 2155 aa13.76□□□□□ -0.21
GGA3-206ENST00000578773 MYH8P13535 1937 aa13.76□□□□□ -0.21
GGA3-206ENST00000578773 SEMA3EO15041 775 aa13.76□□□□□ -0.21
GGA3-206ENST00000578773 ADCY6O43306 1168 aa13.76□□□□□ -0.21
GGA3-206ENST00000578773 ZNF865P0CJ78 1059 aaPredicted RBP13.76□□□□□ -0.21
GGA3-206ENST00000578773 IL9P15248 144 aa13.76□□□□□ -0.21
GGA3-206ENST00000578773 KCNA10Q16322 511 aa13.76□□□□□ -0.21
GGA3-206ENST00000578773 GJD3Q8N144 294 aa13.76□□□□□ -0.21
GGA3-206ENST00000578773 PRSS33Q8NF86 280 aa13.76□□□□□ -0.21
GGA3-206ENST00000578773 NSUN4Q96CB9 384 aaKnown RBP13.76□□□□□ -0.21
GGA3-206ENST00000578773 FEZ1Q99689 392 aa13.76□□□□□ -0.21
GGA3-206ENST00000578773 PI4KBQ9UBF8 816 aa13.76□□□□□ -0.21
GGA3-206ENST00000578773 SAP30BPQ9UHR5 308 aaKnown RBP13.76□□□□□ -0.21
GGA3-206ENST00000578773 PALD1Q9ULE6 856 aa13.76□□□□□ -0.21
GGA3-206ENST00000578773 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.76□□□□□ -0.21
GGA3-206ENST00000578773 ROBO3Q96MS0 1386 aa13.75□□□□□ -0.21
GGA3-206ENST00000578773 ZFHX2Q9C0A1 2572 aaPredicted RBP13.75□□□□□ -0.21
GGA3-206ENST00000578773 LPXNO60711 386 aa13.75□□□□□ -0.21
GGA3-206ENST00000578773 FGBP02675 491 aa13.75□□□□□ -0.21
GGA3-206ENST00000578773 PGK2P07205 417 aa13.75□□□□□ -0.21
GGA3-206ENST00000578773 CCL23P55773 120 aa13.75□□□□□ -0.21
GGA3-206ENST00000578773 ERICH6Q7L0X2 663 aa13.75□□□□□ -0.21
GGA3-206ENST00000578773 METTL16Q86W50 562 aaKnown RBP13.75□□□□□ -0.21
GGA3-206ENST00000578773 WWC1Q8IX03 1113 aa13.75□□□□□ -0.21
GGA3-206ENST00000578773 FAM178BQ8IXR5 827 aa13.75□□□□□ -0.21
GGA3-206ENST00000578773 FAM126BQ8IXS8 530 aa13.75□□□□□ -0.21
GGA3-206ENST00000578773 ZGPATQ8N5A5 531 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms