RNA–Protein interactions for RNA: ENST00000578600.1

PTPRM-208, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-208ENST00000578600 SUGCTQ9HAC7 445 aa7.74□□□□□ -1.17
PTPRM-208ENST00000578600 SIRPGQ9P1W8 387 aa7.74□□□□□ -1.17
PTPRM-208ENST00000578600 PPP1R9AQ9ULJ8 1098 aa7.74□□□□□ -1.17
PTPRM-208ENST00000578600 CNTNAP5Q8WYK1 1306 aa7.74□□□□□ -1.17
PTPRM-208ENST00000578600 CAMSAP2Q08AD1 1489 aa7.74□□□□□ -1.17
PTPRM-208ENST00000578600 DCDC2CA8MYV0 355 aa7.73□□□□□ -1.17
PTPRM-208ENST00000578600 TMPRSS2O15393 492 aa7.73□□□□□ -1.17
PTPRM-208ENST00000578600 IMPDH2P12268 514 aa7.73□□□□□ -1.17
PTPRM-208ENST00000578600 NCLP19338 710 aaKnown RBP7.73□□□□□ -1.17
PTPRM-208ENST00000578600 ERVK-24P63145 666 aa7.73□□□□□ -1.17
PTPRM-208ENST00000578600 RAB33AQ14088 237 aa7.73□□□□□ -1.17
PTPRM-208ENST00000578600 C12orf40Q86WS4 652 aa7.73□□□□□ -1.17
PTPRM-208ENST00000578600 TMEM130Q8N3G9 435 aa7.73□□□□□ -1.17
PTPRM-208ENST00000578600 FAM169BQ8N8A8 192 aa7.73□□□□□ -1.17
PTPRM-208ENST00000578600 ZSCAN1Q8NBB4 408 aa7.73□□□□□ -1.17
PTPRM-208ENST00000578600 SMG8Q8ND04 991 aaKnown RBP7.73□□□□□ -1.17
PTPRM-208ENST00000578600 HNRNPLLQ8WVV9 542 aaKnown RBP7.73□□□□□ -1.17
PTPRM-208ENST00000578600 MKL1Q969V6 931 aa7.73□□□□□ -1.17
PTPRM-208ENST00000578600 ELMO3Q96BJ8 720 aa7.73□□□□□ -1.17
PTPRM-208ENST00000578600 SRPK1Q96SB4 655 aaKnown RBP7.73□□□□□ -1.17
PTPRM-208ENST00000578600 MRPL18Q9H0U6 180 aaKnown RBP7.73□□□□□ -1.17
PTPRM-208ENST00000578600 CRIM1Q9NZV1 1036 aa7.73□□□□□ -1.17
PTPRM-208ENST00000578600 TRPC5Q9UL62 973 aaPredicted RBP7.73□□□□□ -1.17
PTPRM-208ENST00000578600 CORINQ9Y5Q5 1042 aa7.73□□□□□ -1.17
PTPRM-208ENST00000578600 AFF2P51816 1311 aa7.73□□□□□ -1.17
PTPRM-208ENST00000578600 ARHGEF5Q12774 1597 aa7.72□□□□□ -1.17
PTPRM-208ENST00000578600 SMAD7O15105 426 aaKnown RBP7.72□□□□□ -1.17
PTPRM-208ENST00000578600 KLF4O43474 513 aa7.72□□□□□ -1.17
PTPRM-208ENST00000578600 HTR3BO95264 441 aa7.72□□□□□ -1.17
PTPRM-208ENST00000578600 ID3Q02535 119 aa7.72□□□□□ -1.17
PTPRM-208ENST00000578600 ZNF746Q6NUN9 644 aaPredicted RBP7.72□□□□□ -1.17
PTPRM-208ENST00000578600 ACAD11Q709F0 780 aa7.72□□□□□ -1.17
PTPRM-208ENST00000578600 OR6P1Q8NGX9 317 aa7.72□□□□□ -1.17
PTPRM-208ENST00000578600 RNF208Q9H0X6 261 aa7.72□□□□□ -1.17
PTPRM-208ENST00000578600 RAD18Q9NS91 495 aa7.72□□□□□ -1.17
PTPRM-208ENST00000578600 NOP53Q9NZM5 478 aaKnown RBP7.72□□□□□ -1.17
PTPRM-208ENST00000578600 ADAMTS8Q9UP79 889 aa7.72□□□□□ -1.17
PTPRM-208ENST00000578600 HIF3AQ9Y2N7 669 aa7.72□□□□□ -1.17
PTPRM-208ENST00000578600 CSADQ9Y600 493 aa7.72□□□□□ -1.17
PTPRM-208ENST00000578600 EFCAB6Q5THR3 1501 aa7.72□□□□□ -1.17
PTPRM-208ENST00000578600 PLEKHG1Q9ULL1 1385 aa7.71□□□□□ -1.17
PTPRM-208ENST00000578600 MYOM3Q5VTT5 1437 aa7.71□□□□□ -1.17
PTPRM-208ENST00000578600 ERBINQ96RT1 1412 aa7.71□□□□□ -1.17
PTPRM-208ENST00000578600 ROBO1Q9Y6N7 1651 aa7.71□□□□□ -1.18
PTPRM-208ENST00000578600 MEIS3P2A8K0S8 358 aa7.71□□□□□ -1.18
PTPRM-208ENST00000578600 TIAF1O95411 115 aa7.71□□□□□ -1.18
PTPRM-208ENST00000578600 SERINC3Q13530 473 aa7.71□□□□□ -1.18
PTPRM-208ENST00000578600 TMEM201Q5SNT2 666 aa7.71□□□□□ -1.18
PTPRM-208ENST00000578600 SDE2Q6IQ49 451 aa7.71□□□□□ -1.18
PTPRM-208ENST00000578600 LSRQ86X29 649 aaPredicted RBP7.71□□□□□ -1.18
PTPRM-208ENST00000578600 BEND7Q8N7W2 519 aaPredicted RBP7.71□□□□□ -1.18
PTPRM-208ENST00000578600 GSX1Q9H4S2 264 aaPredicted RBP7.71□□□□□ -1.18
PTPRM-208ENST00000578600 DISC1Q9NRI5 854 aa7.71□□□□□ -1.18
PTPRM-208ENST00000578600 DUOX2Q9NRD8 1548 aa7.71□□□□□ -1.18
PTPRM-208ENST00000578600 EIF2AK4Q9P2K8 1649 aaKnown RBP7.7□□□□□ -1.18
PTPRM-208ENST00000578600 DCCP43146 1447 aa7.7□□□□□ -1.18
PTPRM-208ENST00000578600 F8W735 103 aaPredicted RBP7.7□□□□□ -1.18
PTPRM-208ENST00000578600 NTF4P34130 210 aa7.7□□□□□ -1.18
PTPRM-208ENST00000578600 GRIK4Q16099 956 aa7.7□□□□□ -1.18
PTPRM-208ENST00000578600 PRRT3Q5FWE3 981 aa7.7□□□□□ -1.18
PTPRM-208ENST00000578600 AKAP4Q5JQC9 854 aa7.7□□□□□ -1.18
PTPRM-208ENST00000578600 NUTM2GQ5VZR2 741 aa7.7□□□□□ -1.18
PTPRM-208ENST00000578600 SHISA2Q6UWI4 295 aa7.7□□□□□ -1.18
PTPRM-208ENST00000578600 FANCD2OSQ96PS1 177 aa7.7□□□□□ -1.18
PTPRM-208ENST00000578600 WNT10AQ9GZT5 417 aa7.7□□□□□ -1.18
PTPRM-208ENST00000578600 ANTXR1Q9H6X2 564 aa7.7□□□□□ -1.18
PTPRM-208ENST00000578600 CYP4F12Q9HCS2 524 aa7.7□□□□□ -1.18
PTPRM-208ENST00000578600 REV1Q9UBZ9 1251 aa7.7□□□□□ -1.18
PTPRM-208ENST00000578600 ADAM30Q9UKF2 790 aa7.7□□□□□ -1.18
PTPRM-208ENST00000578600 SETD5Q9C0A6 1442 aa7.69□□□□□ -1.18
PTPRM-208ENST00000578600 ANKRD62A6NC57 917 aa7.69□□□□□ -1.18
PTPRM-208ENST00000578600 CCDC85CA6NKD9 419 aa7.69□□□□□ -1.18
PTPRM-208ENST00000578600 DNAJA2O60884 412 aa7.69□□□□□ -1.18
PTPRM-208ENST00000578600 ADH5P11766 374 aa7.69□□□□□ -1.18
PTPRM-208ENST00000578600 COL8A1P27658 744 aa7.69□□□□□ -1.18
PTPRM-208ENST00000578600 GRK4P32298 578 aa7.69□□□□□ -1.18
PTPRM-208ENST00000578600 SOX4Q06945 474 aaPredicted RBP7.69□□□□□ -1.18
PTPRM-208ENST00000578600 PPM1JQ5JR12 505 aa7.69□□□□□ -1.18
PTPRM-208ENST00000578600 ZBTB37Q5TC79 503 aa7.69□□□□□ -1.18
PTPRM-208ENST00000578600 PODNQ7Z5L7 613 aa7.69□□□□□ -1.18
PTPRM-208ENST00000578600 LENG1Q96BZ8 264 aaPredicted RBP7.69□□□□□ -1.18
PTPRM-208ENST00000578600 ACTR10Q9NZ32 417 aa7.69□□□□□ -1.18
PTPRM-208ENST00000578600 KDM5AP29375 1690 aaKnown RBP7.69□□□□□ -1.18
PTPRM-208ENST00000578600 KIF15Q9NS87 1388 aa7.69□□□□□ -1.18
PTPRM-208ENST00000578600 MAP3K1Q13233 1512 aa7.68□□□□□ -1.18
PTPRM-208ENST00000578600 TIAM1Q13009 1591 aa7.68□□□□□ -1.18
PTPRM-208ENST00000578600 PRAMEF27A3QJZ7 478 aa7.68□□□□□ -1.18
PTPRM-208ENST00000578600 SLC22A31A6NKX4 558 aa7.68□□□□□ -1.18
PTPRM-208ENST00000578600 FANCGO15287 622 aa7.68□□□□□ -1.18
PTPRM-208ENST00000578600 CLSTN1O94985 981 aa7.68□□□□□ -1.18
PTPRM-208ENST00000578600 SPATA31C1P0DKV0 1188 aa7.68□□□□□ -1.18
PTPRM-208ENST00000578600 DRD2P14416 443 aa7.68□□□□□ -1.18
PTPRM-208ENST00000578600 PLCG1P19174 1290 aa7.68□□□□□ -1.18
PTPRM-208ENST00000578600 CASP7P55210 303 aa7.68□□□□□ -1.18
PTPRM-208ENST00000578600 PDE4BQ07343 736 aa7.68□□□□□ -1.18
PTPRM-208ENST00000578600 LRRFIP1Q32MZ4 808 aaKnown RBP7.68□□□□□ -1.18
PTPRM-208ENST00000578600 Q6ZS46 218 aa7.68□□□□□ -1.18
PTPRM-208ENST00000578600 BRINP3Q76B58 766 aa7.68□□□□□ -1.18
PTPRM-208ENST00000578600 RNF214Q8ND24 703 aa7.68□□□□□ -1.18
PTPRM-208ENST00000578600 TMEM40Q8WWA1 233 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms