RNA–Protein interactions for RNA: ENST00000578348.5

GGA3-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-205ENST00000578348 KCNJ14Q9UNX9 436 aa13.04□□□□□ -0.32
GGA3-205ENST00000578348 POLRMTO00411 1230 aaKnown RBP13.04□□□□□ -0.32
GGA3-205ENST00000578348 URI1O94763 535 aaPredicted RBP13.04□□□□□ -0.32
GGA3-205ENST00000578348 UFL1O94874 794 aa13.04□□□□□ -0.32
GGA3-205ENST00000578348 SLFN14P0C7P3 912 aa13.04□□□□□ -0.32
GGA3-205ENST00000578348 SAFBQ15424 915 aaKnown RBP eCLIP13.04□□□□□ -0.32
GGA3-205ENST00000578348 IFIT1BQ5T764 474 aaKnown RBP13.04□□□□□ -0.32
GGA3-205ENST00000578348 TRIM65Q6PJ69 517 aa13.04□□□□□ -0.32
GGA3-205ENST00000578348 CATIPQ7Z7H3 387 aa13.04□□□□□ -0.32
GGA3-205ENST00000578348 DIS3L2Q8IYB7 885 aaKnown RBP13.04□□□□□ -0.32
GGA3-205ENST00000578348 RNF26Q9BY78 433 aaPredicted RBP13.04□□□□□ -0.32
GGA3-205ENST00000578348 INTS13Q9NVM9 706 aa13.04□□□□□ -0.32
GGA3-205ENST00000578348 RBM28Q9NW13 759 aaKnown RBP13.04□□□□□ -0.32
GGA3-205ENST00000578348 GGA1Q9UJY5 639 aa13.04□□□□□ -0.32
GGA3-205ENST00000578348 JAG2Q9Y219 1238 aa13.04□□□□□ -0.32
GGA3-205ENST00000578348 KLRG2A4D1S0 409 aaPredicted RBP13.03□□□□□ -0.32
GGA3-205ENST00000578348 FANCGO15287 622 aa13.03□□□□□ -0.32
GGA3-205ENST00000578348 DDAH1O94760 285 aa13.03□□□□□ -0.32
GGA3-205ENST00000578348 MMP1P03956 469 aa13.03□□□□□ -0.32
GGA3-205ENST00000578348 LDHCP07864 332 aa13.03□□□□□ -0.32
GGA3-205ENST00000578348 POSTNQ15063 836 aa13.03□□□□□ -0.32
GGA3-205ENST00000578348 TMC4Q7Z404 712 aa13.03□□□□□ -0.32
GGA3-205ENST00000578348 SLC51AQ86UW1 340 aa13.03□□□□□ -0.32
GGA3-205ENST00000578348 CERS3Q8IU89 383 aa13.03□□□□□ -0.32
GGA3-205ENST00000578348 REXO1L1PQ8IX06 675 aa13.03□□□□□ -0.32
GGA3-205ENST00000578348 CMTR1Q8N1G2 835 aaKnown RBP13.03□□□□□ -0.32
GGA3-205ENST00000578348 PDILTQ8N807 584 aa13.03□□□□□ -0.32
GGA3-205ENST00000578348 ST7Q9NRC1 585 aa13.03□□□□□ -0.32
GGA3-205ENST00000578348 FAM53CQ9NYF3 392 aa13.03□□□□□ -0.32
GGA3-205ENST00000578348 NAV1Q8NEY1 1877 aa13.03□□□□□ -0.32
GGA3-205ENST00000578348 LTBP1Q14766 1721 aa13.03□□□□□ -0.32
GGA3-205ENST00000578348 POLR2DO15514 142 aaKnown RBP13.02□□□□□ -0.32
GGA3-205ENST00000578348 PRR29P0C7W0 189 aa13.02□□□□□ -0.32
GGA3-205ENST00000578348 TOB1P50616 345 aaPredicted RBP13.02□□□□□ -0.32
GGA3-205ENST00000578348 CLCN6P51797 869 aa13.02□□□□□ -0.32
GGA3-205ENST00000578348 MDM2Q00987 491 aaPredicted RBP13.02□□□□□ -0.32
GGA3-205ENST00000578348 TERF2Q15554 542 aa13.02□□□□□ -0.32
GGA3-205ENST00000578348 ZNF827Q17R98 1081 aa13.02□□□□□ -0.32
GGA3-205ENST00000578348 MNS1Q8NEH6 495 aa13.02□□□□□ -0.32
GGA3-205ENST00000578348 UBXN4Q92575 508 aa13.02□□□□□ -0.32
GGA3-205ENST00000578348 NOL10Q9BSC4 688 aaKnown RBP13.02□□□□□ -0.32
GGA3-205ENST00000578348 HOOK1Q9UJC3 728 aaKnown RBP13.02□□□□□ -0.32
GGA3-205ENST00000578348 MAN1B1Q9UKM7 699 aa13.02□□□□□ -0.32
GGA3-205ENST00000578348 NRXN2Q9P2S2 1712 aa13.02□□□□□ -0.33
GGA3-205ENST00000578348 ZSCAN12O43309 604 aa13.02□□□□□ -0.33
GGA3-205ENST00000578348 MYO1BO43795 1136 aa13.02□□□□□ -0.33
GGA3-205ENST00000578348 PRDM1O75626 825 aa13.02□□□□□ -0.33
GGA3-205ENST00000578348 BAG3O95817 575 aa13.02□□□□□ -0.33
GGA3-205ENST00000578348 IL1R1P14778 569 aa13.02□□□□□ -0.33
GGA3-205ENST00000578348 ATP2B1P20020 1258 aa13.02□□□□□ -0.33
GGA3-205ENST00000578348 CDK11BP21127 795 aaKnown RBP13.02□□□□□ -0.33
GGA3-205ENST00000578348 PPP4CP60510 307 aa13.02□□□□□ -0.33
GGA3-205ENST00000578348 TMEM139Q8IV31 216 aa13.02□□□□□ -0.33
GGA3-205ENST00000578348 TRMT44Q8IYL2 757 aaKnown RBP13.02□□□□□ -0.33
GGA3-205ENST00000578348 FOXP1Q9H334 677 aaPredicted RBP13.02□□□□□ -0.33
GGA3-205ENST00000578348 CD209Q9NNX6 404 aa13.02□□□□□ -0.33
GGA3-205ENST00000578348 SERTAD1Q9UHV2 236 aa13.02□□□□□ -0.33
GGA3-205ENST00000578348 PPP2R2CQ9Y2T4 447 aa13.02□□□□□ -0.33
GGA3-205ENST00000578348 NFE2L3Q9Y4A8 694 aa13.02□□□□□ -0.33
GGA3-205ENST00000578348 MYH6P13533 1939 aa13.02□□□□□ -0.33
GGA3-205ENST00000578348 ROBO3Q96MS0 1386 aa13.02□□□□□ -0.33
GGA3-205ENST00000578348 ARHGAP6O43182 974 aa13.01□□□□□ -0.33
GGA3-205ENST00000578348 CYP2D6P10635 497 aa13.01□□□□□ -0.33
GGA3-205ENST00000578348 USP5P45974 858 aa13.01□□□□□ -0.33
GGA3-205ENST00000578348 AKAP17AQ02040 695 aaKnown RBP13.01□□□□□ -0.33
GGA3-205ENST00000578348 FMR1Q06787 632 aaKnown RBP eCLIP13.01□□□□□ -0.33
GGA3-205ENST00000578348 NR5A1Q13285 461 aa13.01□□□□□ -0.33
GGA3-205ENST00000578348 GRAMD1CQ8IYS0 662 aa13.01□□□□□ -0.33
GGA3-205ENST00000578348 PROM2Q8N271 834 aa13.01□□□□□ -0.33
GGA3-205ENST00000578348 GPR101Q96P66 508 aaPredicted RBP13.01□□□□□ -0.33
GGA3-205ENST00000578348 BAG1Q99933 345 aaPredicted RBP13.01□□□□□ -0.33
GGA3-205ENST00000578348 MCM9Q9NXL9 1143 aa13.01□□□□□ -0.33
GGA3-205ENST00000578348 MKRN1Q9UHC7 482 aaKnown RBP13.01□□□□□ -0.33
GGA3-205ENST00000578348 FBXO2Q9UK22 296 aaPredicted RBP13.01□□□□□ -0.33
GGA3-205ENST00000578348 ANKRD31Q8N7Z5 1873 aa13.01□□□□□ -0.33
GGA3-205ENST00000578348 VWA3AA6NCI4 1184 aa13.01□□□□□ -0.33
GGA3-205ENST00000578348 ADKP55263 362 aaKnown RBP13.01□□□□□ -0.33
GGA3-205ENST00000578348 BMS1Q14692 1282 aaKnown RBP13.01□□□□□ -0.33
GGA3-205ENST00000578348 SMARCE1Q969G3 411 aa13.01□□□□□ -0.33
GGA3-205ENST00000578348 CARD6Q9BX69 1037 aa13.01□□□□□ -0.33
GGA3-205ENST00000578348 PCDHB6Q9Y5E3 794 aa13.01□□□□□ -0.33
GGA3-205ENST00000578348 PARP3Q9Y6F1 533 aa13.01□□□□□ -0.33
GGA3-205ENST00000578348 XBP1P17861 261 aa13□□□□□ -0.33
GGA3-205ENST00000578348 PTPREP23469 700 aa13□□□□□ -0.33
GGA3-205ENST00000578348 TROAPQ12815 778 aa13□□□□□ -0.33
GGA3-205ENST00000578348 RILPL1Q5EBL4 403 aa13□□□□□ -0.33
GGA3-205ENST00000578348 C12orf60Q5U649 245 aa13□□□□□ -0.33
GGA3-205ENST00000578348 FCHSD1Q86WN1 690 aa13□□□□□ -0.33
GGA3-205ENST00000578348 AMOTL1Q8IY63 956 aa13□□□□□ -0.33
GGA3-205ENST00000578348 SH3RF3Q8TEJ3 882 aaPredicted RBP13□□□□□ -0.33
GGA3-205ENST00000578348 PRPF3O43395 683 aaKnown RBP13□□□□□ -0.33
GGA3-205ENST00000578348 FUT2Q10981 343 aa13□□□□□ -0.33
GGA3-205ENST00000578348 SPECC1LQ69YQ0 1117 aa13□□□□□ -0.33
GGA3-205ENST00000578348 AEBP2Q6ZN18 517 aaPredicted RBP13□□□□□ -0.33
GGA3-205ENST00000578348 TBC1D16Q8TBP0 767 aa13□□□□□ -0.33
GGA3-205ENST00000578348 BBXQ8WY36 941 aaPredicted RBP13□□□□□ -0.33
GGA3-205ENST00000578348 FHOD1Q9Y613 1164 aa13□□□□□ -0.33
GGA3-205ENST00000578348 TSPY2A6NKD2 308 aa12.99□□□□□ -0.33
GGA3-205ENST00000578348 PPEF1O14829 653 aaPredicted RBP12.99□□□□□ -0.33
GGA3-205ENST00000578348 PLSCR1O15162 318 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms