RNA–Protein interactions for RNA: ENST00000578029.1

KRT39-202, Transcript of keratin 39, humanhuman

TSL 3

Gene KRT39, Length 777 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-202ENST00000578029 DUOXA2Q1HG44 320 aa6.41□□□□□ -1.38
KRT39-202ENST00000578029 ANKRD39Q53RE8 183 aa6.41□□□□□ -1.38
KRT39-202ENST00000578029 CNNM4Q6P4Q7 775 aa6.41□□□□□ -1.38
KRT39-202ENST00000578029 NSMFQ6X4W1 530 aa6.41□□□□□ -1.38
KRT39-202ENST00000578029 DDX46Q7L014 1031 aaKnown RBP6.41□□□□□ -1.38
KRT39-202ENST00000578029 ZNF227Q86WZ6 799 aa6.41□□□□□ -1.38
KRT39-202ENST00000578029 AHI1Q8N157 1196 aa6.41□□□□□ -1.38
KRT39-202ENST00000578029 CRACR2BQ8N4Y2 399 aaPredicted RBP6.41□□□□□ -1.38
KRT39-202ENST00000578029 GALNT6Q8NCL4 622 aa6.41□□□□□ -1.38
KRT39-202ENST00000578029 BVESQ8NE79 360 aa6.41□□□□□ -1.38
KRT39-202ENST00000578029 ATL2Q8NHH9 583 aa6.41□□□□□ -1.38
KRT39-202ENST00000578029 ZNF775Q96BV0 537 aaPredicted RBP6.41□□□□□ -1.38
KRT39-202ENST00000578029 FGD4Q96M96 766 aa6.41□□□□□ -1.38
KRT39-202ENST00000578029 DPH2Q9BQC3 489 aaPredicted RBP6.41□□□□□ -1.38
KRT39-202ENST00000578029 TMPRSS13Q9BYE2 586 aa6.41□□□□□ -1.38
KRT39-202ENST00000578029 GEMIN8Q9NWZ8 242 aaKnown RBP6.41□□□□□ -1.38
KRT39-202ENST00000578029 KCNK4Q9NYG8 393 aa6.41□□□□□ -1.38
KRT39-202ENST00000578029 MEGF11A6BM72 1044 aa6.4□□□□□ -1.38
KRT39-202ENST00000578029 CBFA2T2O43439 604 aa6.4□□□□□ -1.38
KRT39-202ENST00000578029 CST3P01034 146 aaPredicted RBP6.4□□□□□ -1.38
KRT39-202ENST00000578029 SLBPQ14493 270 aaKnown RBP eCLIP6.4□□□□□ -1.38
KRT39-202ENST00000578029 TTLL4Q14679 1199 aa6.4□□□□□ -1.38
KRT39-202ENST00000578029 NKG7Q16617 165 aa6.4□□□□□ -1.38
KRT39-202ENST00000578029 PRAMEF13Q5VWM6 474 aa6.4□□□□□ -1.38
KRT39-202ENST00000578029 NUTM2GQ5VZR2 741 aa6.4□□□□□ -1.38
KRT39-202ENST00000578029 DCAF15Q66K64 600 aa6.4□□□□□ -1.38
KRT39-202ENST00000578029 ILDR2Q71H61 639 aa6.4□□□□□ -1.38
KRT39-202ENST00000578029 PPM1KQ8N3J5 372 aa6.4□□□□□ -1.38
KRT39-202ENST00000578029 UBASH3BQ8TF42 649 aa6.4□□□□□ -1.38
KRT39-202ENST00000578029 ACDQ96AP0 544 aa6.4□□□□□ -1.38
KRT39-202ENST00000578029 BTBD6Q96KE9 485 aa6.4□□□□□ -1.38
KRT39-202ENST00000578029 TARS2Q9BW92 718 aaKnown RBP6.4□□□□□ -1.38
KRT39-202ENST00000578029 COL25A1Q9BXS0 654 aaPredicted RBP6.4□□□□□ -1.38
KRT39-202ENST00000578029 PCGF6Q9BYE7 350 aa6.4□□□□□ -1.38
KRT39-202ENST00000578029 MKRN2Q9H000 416 aaKnown RBP6.4□□□□□ -1.38
KRT39-202ENST00000578029 CYP4F12Q9HCS2 524 aa6.4□□□□□ -1.38
KRT39-202ENST00000578029 SLC52A1Q9NWF4 448 aa6.4□□□□□ -1.38
KRT39-202ENST00000578029 WHRNQ9P202 907 aa6.4□□□□□ -1.38
KRT39-202ENST00000578029 APEX2Q9UBZ4 518 aa6.4□□□□□ -1.38
KRT39-202ENST00000578029 SFMBT1Q9UHJ3 866 aa6.4□□□□□ -1.38
KRT39-202ENST00000578029 AP4E1Q9UPM8 1137 aa6.4□□□□□ -1.38
KRT39-202ENST00000578029 EFCAB14O75071 495 aa6.39□□□□□ -1.39
KRT39-202ENST00000578029 SDSP20132 328 aa6.39□□□□□ -1.39
KRT39-202ENST00000578029 FAM50AQ14320 339 aaKnown RBP6.39□□□□□ -1.39
KRT39-202ENST00000578029 TRIM61Q5EBN2 209 aa6.39□□□□□ -1.39
KRT39-202ENST00000578029 POMZP3Q6PJE2 187 aa6.39□□□□□ -1.39
KRT39-202ENST00000578029 C1orf229Q6ZS94 237 aaPredicted RBP6.39□□□□□ -1.39
KRT39-202ENST00000578029 AFAP1L2Q8N4X5 818 aa6.39□□□□□ -1.39
KRT39-202ENST00000578029 RIN3Q8TB24 985 aa6.39□□□□□ -1.39
KRT39-202ENST00000578029 DDX1Q92499 740 aaKnown RBP6.39□□□□□ -1.39
KRT39-202ENST00000578029 FOXQ1Q9C009 403 aa6.39□□□□□ -1.39
KRT39-202ENST00000578029 RNF208Q9H0X6 261 aa6.39□□□□□ -1.39
KRT39-202ENST00000578029 PIDD1Q9HB75 910 aa6.39□□□□□ -1.39
KRT39-202ENST00000578029 SSU72Q9NP77 194 aaKnown RBP6.39□□□□□ -1.39
KRT39-202ENST00000578029 THRAP3Q9Y2W1 955 aaKnown RBP6.39□□□□□ -1.39
KRT39-202ENST00000578029 EID1Q9Y6B2 187 aa6.39□□□□□ -1.39
KRT39-202ENST00000578029 WASHC2CQ9Y4E1 1318 aa6.39□□□□□ -1.39
KRT39-202ENST00000578029 RNGTTO60942 597 aaKnown RBP6.38□□□□□ -1.39
KRT39-202ENST00000578029 DEAF1O75398 565 aaPredicted RBP6.38□□□□□ -1.39
KRT39-202ENST00000578029 NPTXRO95502 500 aa6.38□□□□□ -1.39
KRT39-202ENST00000578029 ADH5P11766 374 aa6.38□□□□□ -1.39
KRT39-202ENST00000578029 ITGA4P13612 1032 aa6.38□□□□□ -1.39
KRT39-202ENST00000578029 NID1P14543 1247 aa6.38□□□□□ -1.39
KRT39-202ENST00000578029 CD247P20963 164 aa6.38□□□□□ -1.39
KRT39-202ENST00000578029 GUCY2FP51841 1108 aa6.38□□□□□ -1.39
KRT39-202ENST00000578029 RNF4P78317 190 aa6.38□□□□□ -1.39
KRT39-202ENST00000578029 GABREP78334 506 aa6.38□□□□□ -1.39
KRT39-202ENST00000578029 RNFT1Q5M7Z0 435 aa6.38□□□□□ -1.39
KRT39-202ENST00000578029 LCE2AQ5TA79 106 aaPredicted RBP6.38□□□□□ -1.39
KRT39-202ENST00000578029 ZNF513Q8N8E2 541 aaPredicted RBP6.38□□□□□ -1.39
KRT39-202ENST00000578029 MFSD2AQ8NA29 543 aa6.38□□□□□ -1.39
KRT39-202ENST00000578029 SMG8Q8ND04 991 aaKnown RBP6.38□□□□□ -1.39
KRT39-202ENST00000578029 OSBP2Q969R2 916 aa6.38□□□□□ -1.39
KRT39-202ENST00000578029 RCC1LQ96I51 464 aaKnown RBP6.38□□□□□ -1.39
KRT39-202ENST00000578029 SUGCTQ9HAC7 445 aa6.38□□□□□ -1.39
KRT39-202ENST00000578029 AKT3Q9Y243 479 aa6.38□□□□□ -1.39
KRT39-202ENST00000578029 ZNF451Q9Y4E5 1061 aa6.38□□□□□ -1.39
KRT39-202ENST00000578029 CCDC194A0A1B0GVG4 234 aa6.37□□□□□ -1.39
KRT39-202ENST00000578029 H3BM21 787 aa6.37□□□□□ -1.39
KRT39-202ENST00000578029 OIP5O43482 229 aa6.37□□□□□ -1.39
KRT39-202ENST00000578029 ALDH1L1O75891 902 aa6.37□□□□□ -1.39
KRT39-202ENST00000578029 DNAJC8O75937 253 aaPredicted RBP6.37□□□□□ -1.39
KRT39-202ENST00000578029 LRIG2O94898 1065 aa6.37□□□□□ -1.39
KRT39-202ENST00000578029 CAPNS1P04632 268 aa6.37□□□□□ -1.39
KRT39-202ENST00000578029 NEFMP07197 916 aa6.37□□□□□ -1.39
KRT39-202ENST00000578029 VSIG8P0DPA2 414 aa6.37□□□□□ -1.39
KRT39-202ENST00000578029 AMPD1P23109 780 aa6.37□□□□□ -1.39
KRT39-202ENST00000578029 GRIA2P42262 883 aa6.37□□□□□ -1.39
KRT39-202ENST00000578029 EPHB1P54762 984 aa6.37□□□□□ -1.39
KRT39-202ENST00000578029 SOX4Q06945 474 aaPredicted RBP6.37□□□□□ -1.39
KRT39-202ENST00000578029 TRAPPC3LQ5T215 181 aa6.37□□□□□ -1.39
KRT39-202ENST00000578029 LCE2CQ5TA81 110 aa6.37□□□□□ -1.39
KRT39-202ENST00000578029 NBPF12Q5TAG4 269 aaPredicted RBP6.37□□□□□ -1.39
KRT39-202ENST00000578029 DYMQ7RTS9 669 aa6.37□□□□□ -1.39
KRT39-202ENST00000578029 TRIM59Q8IWR1 403 aa6.37□□□□□ -1.39
KRT39-202ENST00000578029 CCAR1Q8IX12 1150 aaKnown RBP6.37□□□□□ -1.39
KRT39-202ENST00000578029 C7orf61Q8IZ16 206 aa6.37□□□□□ -1.39
KRT39-202ENST00000578029 XAGE3Q8WTP9 111 aa6.37□□□□□ -1.39
KRT39-202ENST00000578029 LEO1Q8WVC0 666 aaPredicted RBP6.37□□□□□ -1.39
KRT39-202ENST00000578029 ISL2Q96A47 359 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms