RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 POTEFA5A3E0 1075 aa26.32■■□□□ 1.8
SMARCD2-206ENST00000577990 TSPY3P0CV98 308 aa26.32■■□□□ 1.8
SMARCD2-206ENST00000577990 TSPY8P0CW00 308 aa26.32■■□□□ 1.8
SMARCD2-206ENST00000577990 CTGFP29279 349 aa26.32■■□□□ 1.8
SMARCD2-206ENST00000577990 ANKRD13CQ8N6S4 541 aa26.32■■□□□ 1.8
SMARCD2-206ENST00000577990 NEDD1Q8NHV4 660 aa26.32■■□□□ 1.8
SMARCD2-206ENST00000577990 LPAR1Q92633 364 aa26.32■■□□□ 1.8
SMARCD2-206ENST00000577990 P2RX7Q99572 595 aaKnown RBP26.32■■□□□ 1.8
SMARCD2-206ENST00000577990 VCPKMTQ9H867 229 aa26.32■■□□□ 1.8
SMARCD2-206ENST00000577990 TACC3Q9Y6A5 838 aa26.32■■□□□ 1.8
SMARCD2-206ENST00000577990 LAMA4Q16363 1823 aa26.31■■□□□ 1.8
SMARCD2-206ENST00000577990 HAND2P61296 217 aa26.31■■□□□ 1.8
SMARCD2-206ENST00000577990 HERVK_113P62684 666 aa26.31■■□□□ 1.8
SMARCD2-206ENST00000577990 TFAP4Q01664 338 aa26.31■■□□□ 1.8
SMARCD2-206ENST00000577990 FAM110CQ1W6H9 321 aa26.31■■□□□ 1.8
SMARCD2-206ENST00000577990 BMP2KLQ5H9B9 411 aa26.31■■□□□ 1.8
SMARCD2-206ENST00000577990 FAM47AQ5JRC9 791 aa26.31■■□□□ 1.8
SMARCD2-206ENST00000577990 CATSPERGQ6ZRH7 1159 aa26.31■■□□□ 1.8
SMARCD2-206ENST00000577990 ARMC5Q96C12 935 aa26.31■■□□□ 1.8
SMARCD2-206ENST00000577990 RPAP3Q9H6T3 665 aaPredicted RBP26.31■■□□□ 1.8
SMARCD2-206ENST00000577990 INCENPQ9NQS7 918 aa26.31■■□□□ 1.8
SMARCD2-206ENST00000577990 PPP4R2Q9NY27 417 aa26.31■■□□□ 1.8
SMARCD2-206ENST00000577990 NYAP2Q9P242 653 aa26.31■■□□□ 1.8
SMARCD2-206ENST00000577990 ORC4O43929 436 aa26.3■■□□□ 1.8
SMARCD2-206ENST00000577990 FGRP09769 529 aa26.3■■□□□ 1.8
SMARCD2-206ENST00000577990 KIAA1755Q5JYT7 1200 aa26.3■■□□□ 1.8
SMARCD2-206ENST00000577990 PSMC4P43686 418 aa26.29■■□□□ 1.8
SMARCD2-206ENST00000577990 SLC9C1Q4G0N8 1177 aa26.29■■□□□ 1.8
SMARCD2-206ENST00000577990 GTF3C2Q8WUA4 911 aaPredicted RBP26.29■■□□□ 1.8
SMARCD2-206ENST00000577990 CEP95Q96GE4 821 aa26.29■■□□□ 1.8
SMARCD2-206ENST00000577990 TRIM47Q96LD4 638 aa26.29■■□□□ 1.8
SMARCD2-206ENST00000577990 GOPCQ9HD26 462 aa26.29■■□□□ 1.8
SMARCD2-206ENST00000577990 MTMR4Q9NYA4 1195 aa26.29■■□□□ 1.8
SMARCD2-206ENST00000577990 MYH4Q9Y623 1939 aa26.28■■□□□ 1.8
SMARCD2-206ENST00000577990 TSPY2A6NKD2 308 aa26.28■■□□□ 1.8
SMARCD2-206ENST00000577990 RANBP6O60518 1105 aaKnown RBP26.28■■□□□ 1.8
SMARCD2-206ENST00000577990 MYCP01106 439 aaPredicted RBP26.28■■□□□ 1.8
SMARCD2-206ENST00000577990 GNRH1P01148 92 aa26.28■■□□□ 1.8
SMARCD2-206ENST00000577990 TBC1D10CQ8IV04 446 aa26.28■■□□□ 1.8
SMARCD2-206ENST00000577990 SPICE1Q8N0Z3 855 aa26.28■■□□□ 1.8
SMARCD2-206ENST00000577990 NBPF3Q9H094 633 aa26.28■■□□□ 1.8
SMARCD2-206ENST00000577990 TOMM22Q9NS69 142 aa26.28■■□□□ 1.8
SMARCD2-206ENST00000577990 CTNNA3Q9UI47 895 aa26.28■■□□□ 1.8
SMARCD2-206ENST00000577990 ZNF213O14771 459 aa26.27■■□□□ 1.8
SMARCD2-206ENST00000577990 WDR46O15213 610 aaKnown RBP26.27■■□□□ 1.8
SMARCD2-206ENST00000577990 SGSM2O43147 1006 aa26.27■■□□□ 1.8
SMARCD2-206ENST00000577990 FMNL1O95466 1100 aaPredicted RBP26.27■■□□□ 1.8
SMARCD2-206ENST00000577990 PCP11498 1178 aaKnown RBP26.27■■□□□ 1.8
SMARCD2-206ENST00000577990 FCGRTP55899 365 aa26.27■■□□□ 1.8
SMARCD2-206ENST00000577990 AKNAD1Q5T1N1 836 aa26.27■■□□□ 1.8
SMARCD2-206ENST00000577990 SH3TC2Q8TF17 1288 aa26.27■■□□□ 1.8
SMARCD2-206ENST00000577990 STAG1Q8WVM7 1258 aa26.27■■□□□ 1.8
SMARCD2-206ENST00000577990 ZNF333Q96JL9 665 aa26.27■■□□□ 1.8
SMARCD2-206ENST00000577990 TANGO6Q9C0B7 1094 aa26.27■■□□□ 1.8
SMARCD2-206ENST00000577990 RNF41Q9H4P4 317 aaPredicted RBP26.27■■□□□ 1.8
SMARCD2-206ENST00000577990 MORF4L1Q9UBU8 362 aa26.27■■□□□ 1.8
SMARCD2-206ENST00000577990 CLIP2Q9UDT6 1046 aa26.27■■□□□ 1.8
SMARCD2-206ENST00000577990 TTLL1O95922 423 aa26.26■■□□□ 1.79
SMARCD2-206ENST00000577990 RRP12Q5JTH9 1297 aaKnown RBP26.26■■□□□ 1.79
SMARCD2-206ENST00000577990 MFSD6Q6ZSS7 791 aa26.26■■□□□ 1.79
SMARCD2-206ENST00000577990 DOCK3Q8IZD9 2030 aa26.26■■□□□ 1.79
SMARCD2-206ENST00000577990 RAD21O60216 631 aa26.25■■□□□ 1.79
SMARCD2-206ENST00000577990 IMMTQ16891 758 aaKnown RBP26.25■■□□□ 1.79
SMARCD2-206ENST00000577990 PPP4R3BQ5MIZ7 849 aa26.25■■□□□ 1.79
SMARCD2-206ENST00000577990 MKL1Q969V6 931 aa26.25■■□□□ 1.79
SMARCD2-206ENST00000577990 SYNPO2Q9UMS6 1093 aa26.25■■□□□ 1.79
SMARCD2-206ENST00000577990 HOXD10P28358 340 aa26.24■■□□□ 1.79
SMARCD2-206ENST00000577990 LBX2Q6XYB7 198 aa26.24■■□□□ 1.79
SMARCD2-206ENST00000577990 GPRC5AQ8NFJ5 357 aa26.24■■□□□ 1.79
SMARCD2-206ENST00000577990 PAGR1Q9BTK6 254 aa26.24■■□□□ 1.79
SMARCD2-206ENST00000577990 TXNRD2Q9NNW7 524 aa26.24■■□□□ 1.79
SMARCD2-206ENST00000577990 RBPJLQ9UBG7 517 aa26.24■■□□□ 1.79
SMARCD2-206ENST00000577990 SPDYE16A6NNV3 312 aaPredicted RBP26.23■■□□□ 1.79
SMARCD2-206ENST00000577990 PRMT2P55345 433 aa26.23■■□□□ 1.79
SMARCD2-206ENST00000577990 COG2Q14746 738 aa26.23■■□□□ 1.79
SMARCD2-206ENST00000577990 POTEEQ6S8J3 1075 aa26.23■■□□□ 1.79
SMARCD2-206ENST00000577990 SRRDQ9UH36 339 aa26.23■■□□□ 1.79
SMARCD2-206ENST00000577990 RABGAP1Q9Y3P9 1069 aa26.23■■□□□ 1.79
SMARCD2-206ENST00000577990 RLFQ13129 1914 aa26.22■■□□□ 1.79
SMARCD2-206ENST00000577990 NEDD4P46934 1319 aa26.22■■□□□ 1.79
SMARCD2-206ENST00000577990 F5H6K3 240 aa26.22■■□□□ 1.79
SMARCD2-206ENST00000577990 TNPO2O14787 897 aaKnown RBP26.22■■□□□ 1.79
SMARCD2-206ENST00000577990 PEX10O60683 326 aa26.22■■□□□ 1.79
SMARCD2-206ENST00000577990 NDUFB10O96000 172 aa26.22■■□□□ 1.79
SMARCD2-206ENST00000577990 EN2P19622 333 aaPredicted RBP26.22■■□□□ 1.79
SMARCD2-206ENST00000577990 ERVK-9P63128 1117 aa26.22■■□□□ 1.79
SMARCD2-206ENST00000577990 ERVK-24P63145 666 aa26.22■■□□□ 1.79
SMARCD2-206ENST00000577990 PTH1RQ03431 593 aa26.22■■□□□ 1.79
SMARCD2-206ENST00000577990 KLRC3Q07444 240 aa26.22■■□□□ 1.79
SMARCD2-206ENST00000577990 NBPF11Q86T75 865 aa26.22■■□□□ 1.79
SMARCD2-206ENST00000577990 LRRC47Q8N1G4 583 aaKnown RBP26.22■■□□□ 1.79
SMARCD2-206ENST00000577990 IL17RBQ9NRM6 502 aa26.22■■□□□ 1.79
SMARCD2-206ENST00000577990 HOXC10Q9NYD6 342 aa26.22■■□□□ 1.79
SMARCD2-206ENST00000577990 MYPNQ86TC9 1320 aa26.21■■□□□ 1.79
SMARCD2-206ENST00000577990 NMT2O60551 498 aa26.21■■□□□ 1.79
SMARCD2-206ENST00000577990 FLOT1O75955 427 aa26.21■■□□□ 1.79
SMARCD2-206ENST00000577990 FAM83BQ5T0W9 1011 aa26.21■■□□□ 1.79
SMARCD2-206ENST00000577990 STX8Q9UNK0 236 aa26.21■■□□□ 1.79
SMARCD2-206ENST00000577990 CNMDO75829 334 aa26.2■■□□□ 1.78
SMARCD2-206ENST00000577990 NT5C2P49902 561 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms