RNA–Protein interactions for RNA: ENST00000577854.1

CDKN2A-211, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 442 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-211ENST00000577854 BAZ2AQ9UIF9 1905 aaKnown RBP10.97□□□□□ -0.65
CDKN2A-211ENST00000577854 ROBO3Q96MS0 1386 aa10.96□□□□□ -0.65
CDKN2A-211ENST00000577854 PEX10O60683 326 aa10.96□□□□□ -0.65
CDKN2A-211ENST00000577854 FLOT1O75955 427 aa10.96□□□□□ -0.65
CDKN2A-211ENST00000577854 HSPD1P10809 573 aaKnown RBP10.96□□□□□ -0.65
CDKN2A-211ENST00000577854 GSPT1P15170 499 aaKnown RBP10.96□□□□□ -0.65
CDKN2A-211ENST00000577854 TFAP4Q01664 338 aa10.96□□□□□ -0.65
CDKN2A-211ENST00000577854 PLS1Q14651 629 aa10.96□□□□□ -0.65
CDKN2A-211ENST00000577854 SH3TC2Q8TF17 1288 aa10.96□□□□□ -0.65
CDKN2A-211ENST00000577854 GTF3C2Q8WUA4 911 aaPredicted RBP10.96□□□□□ -0.65
CDKN2A-211ENST00000577854 RUFY2Q8WXA3 655 aa10.96□□□□□ -0.65
CDKN2A-211ENST00000577854 LPAR1Q92633 364 aa10.96□□□□□ -0.65
CDKN2A-211ENST00000577854 C12orf42Q96LP6 360 aa10.96□□□□□ -0.65
CDKN2A-211ENST00000577854 VCPKMTQ9H867 229 aa10.96□□□□□ -0.65
CDKN2A-211ENST00000577854 CLIP2Q9UDT6 1046 aa10.96□□□□□ -0.65
CDKN2A-211ENST00000577854 SRRDQ9UH36 339 aa10.96□□□□□ -0.65
CDKN2A-211ENST00000577854 CTDP1Q9Y5B0 961 aaPredicted RBP10.96□□□□□ -0.65
CDKN2A-211ENST00000577854 FGAP02671 866 aa10.95□□□□□ -0.66
CDKN2A-211ENST00000577854 CTGFP29279 349 aa10.95□□□□□ -0.66
CDKN2A-211ENST00000577854 PRMT2P55345 433 aa10.95□□□□□ -0.66
CDKN2A-211ENST00000577854 CCNA1P78396 465 aa10.95□□□□□ -0.66
CDKN2A-211ENST00000577854 IKQ13123 557 aaPredicted RBP10.95□□□□□ -0.66
CDKN2A-211ENST00000577854 CATSPERGQ6ZRH7 1159 aa10.95□□□□□ -0.66
CDKN2A-211ENST00000577854 TICAM2Q86XR7 235 aa10.95□□□□□ -0.66
CDKN2A-211ENST00000577854 LRRC47Q8N1G4 583 aaKnown RBP10.95□□□□□ -0.66
CDKN2A-211ENST00000577854 TMEM106CQ9BVX2 250 aa10.95□□□□□ -0.66
CDKN2A-211ENST00000577854 INCENPQ9NQS7 918 aa10.95□□□□□ -0.66
CDKN2A-211ENST00000577854 STX8Q9UNK0 236 aa10.95□□□□□ -0.66
CDKN2A-211ENST00000577854 TMX2Q9Y320 296 aa10.95□□□□□ -0.66
CDKN2A-211ENST00000577854 PHIPQ8WWQ0 1821 aa10.95□□□□□ -0.66
CDKN2A-211ENST00000577854 ZNF213O14771 459 aa10.94□□□□□ -0.66
CDKN2A-211ENST00000577854 WDR46O15213 610 aaKnown RBP10.94□□□□□ -0.66
CDKN2A-211ENST00000577854 FOXP2O15409 715 aa10.94□□□□□ -0.66
CDKN2A-211ENST00000577854 TTLL1O95922 423 aa10.94□□□□□ -0.66
CDKN2A-211ENST00000577854 GRK4P32298 578 aa10.94□□□□□ -0.66
CDKN2A-211ENST00000577854 SLC4A3P48751 1232 aa10.94□□□□□ -0.66
CDKN2A-211ENST00000577854 FLT3LGP49771 235 aa10.94□□□□□ -0.66
CDKN2A-211ENST00000577854 ERVK-9P63128 1117 aa10.94□□□□□ -0.66
CDKN2A-211ENST00000577854 ERVK-24P63145 666 aa10.94□□□□□ -0.66
CDKN2A-211ENST00000577854 FAM83BQ5T0W9 1011 aa10.94□□□□□ -0.66
CDKN2A-211ENST00000577854 CEP95Q96GE4 821 aa10.94□□□□□ -0.66
CDKN2A-211ENST00000577854 NUP88Q99567 741 aaPredicted RBP10.94□□□□□ -0.66
CDKN2A-211ENST00000577854 TXNRD2Q9NNW7 524 aa10.94□□□□□ -0.66
CDKN2A-211ENST00000577854 HOXC10Q9NYD6 342 aa10.94□□□□□ -0.66
CDKN2A-211ENST00000577854 GABRQQ9UN88 632 aa10.94□□□□□ -0.66
CDKN2A-211ENST00000577854 IVNS1ABPQ9Y6Y0 642 aa10.94□□□□□ -0.66
CDKN2A-211ENST00000577854 LOC285556D6RIA3 1793 aa10.94□□□□□ -0.66
CDKN2A-211ENST00000577854 SPDYE16A6NNV3 312 aaPredicted RBP10.93□□□□□ -0.66
CDKN2A-211ENST00000577854 MAPK4P31152 587 aa10.93□□□□□ -0.66
CDKN2A-211ENST00000577854 UBXN2AP68543 259 aa10.93□□□□□ -0.66
CDKN2A-211ENST00000577854 COG2Q14746 738 aa10.93□□□□□ -0.66
CDKN2A-211ENST00000577854 ALX1Q15699 326 aa10.93□□□□□ -0.66
CDKN2A-211ENST00000577854 KIAA1755Q5JYT7 1200 aa10.93□□□□□ -0.66
CDKN2A-211ENST00000577854 PPP4R3BQ5MIZ7 849 aa10.93□□□□□ -0.66
CDKN2A-211ENST00000577854 MFSD6Q6ZSS7 791 aa10.93□□□□□ -0.66
CDKN2A-211ENST00000577854 SKAP1Q86WV1 359 aa10.93□□□□□ -0.66
CDKN2A-211ENST00000577854 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.93□□□□□ -0.66
CDKN2A-211ENST00000577854 RNF41Q9H4P4 317 aaPredicted RBP10.93□□□□□ -0.66
CDKN2A-211ENST00000577854 NYAP2Q9P242 653 aa10.93□□□□□ -0.66
CDKN2A-211ENST00000577854 RBPJLQ9UBG7 517 aa10.93□□□□□ -0.66
CDKN2A-211ENST00000577854 MORF4L1Q9UBU8 362 aa10.93□□□□□ -0.66
CDKN2A-211ENST00000577854 RABGAP1Q9Y3P9 1069 aa10.93□□□□□ -0.66
CDKN2A-211ENST00000577854 HTTP42858 3142 aa10.92□□□□□ -0.66
CDKN2A-211ENST00000577854 PTPRFP10586 1907 aa10.92□□□□□ -0.66
CDKN2A-211ENST00000577854 F5H6K3 240 aa10.92□□□□□ -0.66
CDKN2A-211ENST00000577854 ADCY3O60266 1144 aa10.92□□□□□ -0.66
CDKN2A-211ENST00000577854 NMT2O60551 498 aa10.92□□□□□ -0.66
CDKN2A-211ENST00000577854 ELNP15502 786 aa10.92□□□□□ -0.66
CDKN2A-211ENST00000577854 CYP2B6P20813 491 aa10.92□□□□□ -0.66
CDKN2A-211ENST00000577854 KLRC3Q07444 240 aa10.92□□□□□ -0.66
CDKN2A-211ENST00000577854 IMMTQ16891 758 aaKnown RBP10.92□□□□□ -0.66
CDKN2A-211ENST00000577854 PLEKHH3Q7Z736 793 aa10.92□□□□□ -0.66
CDKN2A-211ENST00000577854 NCAPG2Q86XI2 1143 aa10.92□□□□□ -0.66
CDKN2A-211ENST00000577854 SIAH1Q8IUQ4 282 aa10.92□□□□□ -0.66
CDKN2A-211ENST00000577854 SLAIN1Q8ND83 568 aa10.92□□□□□ -0.66
CDKN2A-211ENST00000577854 NEDD1Q8NHV4 660 aa10.92□□□□□ -0.66
CDKN2A-211ENST00000577854 ATG4CQ96DT6 458 aa10.92□□□□□ -0.66
CDKN2A-211ENST00000577854 NUDT12Q9BQG2 462 aa10.92□□□□□ -0.66
CDKN2A-211ENST00000577854 PORCNQ9H237 461 aa10.92□□□□□ -0.66
CDKN2A-211ENST00000577854 MTMR4Q9NYA4 1195 aa10.92□□□□□ -0.66
CDKN2A-211ENST00000577854 CTNNA3Q9UI47 895 aa10.92□□□□□ -0.66
CDKN2A-211ENST00000577854 ZSWIM8A7E2V4 1837 aa10.91□□□□□ -0.66
CDKN2A-211ENST00000577854 RAD50Q92878 1312 aa10.91□□□□□ -0.66
CDKN2A-211ENST00000577854 NDUFB10O96000 172 aa10.91□□□□□ -0.66
CDKN2A-211ENST00000577854 CHMLP26374 656 aa10.91□□□□□ -0.66
CDKN2A-211ENST00000577854 CCDC96Q2M329 555 aa10.91□□□□□ -0.66
CDKN2A-211ENST00000577854 Q3C1V9 767 aa10.91□□□□□ -0.66
CDKN2A-211ENST00000577854 AKNAD1Q5T1N1 836 aa10.91□□□□□ -0.66
CDKN2A-211ENST00000577854 SLFN13Q68D06 897 aa10.91□□□□□ -0.66
CDKN2A-211ENST00000577854 KIAA1211Q6ZU35 1233 aa10.91□□□□□ -0.66
CDKN2A-211ENST00000577854 GPR142Q7Z601 462 aa10.91□□□□□ -0.66
CDKN2A-211ENST00000577854 TBC1D10CQ8IV04 446 aa10.91□□□□□ -0.66
CDKN2A-211ENST00000577854 SOCS4Q8WXH5 440 aa10.91□□□□□ -0.66
CDKN2A-211ENST00000577854 ESR2Q92731 530 aa10.91□□□□□ -0.66
CDKN2A-211ENST00000577854 KIFC2Q96AC6 838 aa10.91□□□□□ -0.66
CDKN2A-211ENST00000577854 ARMC5Q96C12 935 aa10.91□□□□□ -0.66
CDKN2A-211ENST00000577854 ZNF333Q96JL9 665 aa10.91□□□□□ -0.66
CDKN2A-211ENST00000577854 SLF1Q9BQI6 1058 aa10.91□□□□□ -0.66
CDKN2A-211ENST00000577854 DSCC1Q9BVC3 393 aa10.91□□□□□ -0.66
CDKN2A-211ENST00000577854 FBXO28Q9NVF7 368 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms