RNA–Protein interactions for RNA: ENST00000577802.1

CDK5RAP3-205, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 415 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-205ENST00000577802 CLIP2Q9UDT6 1046 aa15.46■□□□□ 0.07
CDK5RAP3-205ENST00000577802 CSADQ9Y600 493 aa15.46■□□□□ 0.07
CDK5RAP3-205ENST00000577802 OTOFQ9HC10 1997 aa15.45■□□□□ 0.06
CDK5RAP3-205ENST00000577802 PTPDC1A2A3K4 754 aa15.45■□□□□ 0.06
CDK5RAP3-205ENST00000577802 UNCXA6NJT0 531 aa15.45■□□□□ 0.06
CDK5RAP3-205ENST00000577802 PARP1P09874 1014 aaKnown RBP15.45■□□□□ 0.06
CDK5RAP3-205ENST00000577802 EEF2P13639 858 aaKnown RBP15.45■□□□□ 0.06
CDK5RAP3-205ENST00000577802 AKAP17AQ02040 695 aaKnown RBP15.45■□□□□ 0.06
CDK5RAP3-205ENST00000577802 ARMC9Q7Z3E5 817 aa15.45■□□□□ 0.06
CDK5RAP3-205ENST00000577802 FEZ1Q99689 392 aa15.45■□□□□ 0.06
CDK5RAP3-205ENST00000577802 MYL10Q9BUA6 226 aa15.45■□□□□ 0.06
CDK5RAP3-205ENST00000577802 SENP2Q9HC62 589 aa15.45■□□□□ 0.06
CDK5RAP3-205ENST00000577802 SCAF8Q9UPN6 1271 aaKnown RBP15.45■□□□□ 0.06
CDK5RAP3-205ENST00000577802 USP17L5A8MUK1 530 aa15.44■□□□□ 0.06
CDK5RAP3-205ENST00000577802 IFNAR1P17181 557 aa15.44■□□□□ 0.06
CDK5RAP3-205ENST00000577802 GJB2P29033 226 aa15.44■□□□□ 0.06
CDK5RAP3-205ENST00000577802 USP14P54578 494 aa15.44■□□□□ 0.06
CDK5RAP3-205ENST00000577802 FKBP1BP68106 108 aa15.44■□□□□ 0.06
CDK5RAP3-205ENST00000577802 NUCB2P80303 420 aa15.44■□□□□ 0.06
CDK5RAP3-205ENST00000577802 LRRC47Q8N1G4 583 aaKnown RBP15.44■□□□□ 0.06
CDK5RAP3-205ENST00000577802 SPRYD3Q8NCJ5 442 aa15.44■□□□□ 0.06
CDK5RAP3-205ENST00000577802 RGS22Q8NE09 1264 aa15.44■□□□□ 0.06
CDK5RAP3-205ENST00000577802 NSUN7Q8NE18 718 aaKnown RBP15.44■□□□□ 0.06
CDK5RAP3-205ENST00000577802 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.44■□□□□ 0.06
CDK5RAP3-205ENST00000577802 SMARCC2Q8TAQ2 1214 aa15.44■□□□□ 0.06
CDK5RAP3-205ENST00000577802 KLRG1Q96E93 195 aa15.44■□□□□ 0.06
CDK5RAP3-205ENST00000577802 NCOA5Q9HCD5 579 aaKnown RBP15.44■□□□□ 0.06
CDK5RAP3-205ENST00000577802 FOXD4L1Q9NU39 408 aa15.44■□□□□ 0.06
CDK5RAP3-205ENST00000577802 CHMP5Q9NZZ3 219 aa15.44■□□□□ 0.06
CDK5RAP3-205ENST00000577802 RXRAP19793 462 aa15.43■□□□□ 0.06
CDK5RAP3-205ENST00000577802 SMARCA1P28370 1054 aa15.43■□□□□ 0.06
CDK5RAP3-205ENST00000577802 GUCY1A2P33402 732 aa15.43■□□□□ 0.06
CDK5RAP3-205ENST00000577802 SSRP1Q08945 709 aaKnown RBP15.43■□□□□ 0.06
CDK5RAP3-205ENST00000577802 ST3GAL1Q11201 340 aa15.43■□□□□ 0.06
CDK5RAP3-205ENST00000577802 TTLL12Q14166 644 aaPredicted RBP15.43■□□□□ 0.06
CDK5RAP3-205ENST00000577802 TMTC3Q6ZXV5 915 aa15.43■□□□□ 0.06
CDK5RAP3-205ENST00000577802 CCDC144CPQ8IYA2 1237 aa15.43■□□□□ 0.06
CDK5RAP3-205ENST00000577802 ANKRD13AQ8IZ07 590 aa15.43■□□□□ 0.06
CDK5RAP3-205ENST00000577802 GMCL1Q96IK5 515 aa15.43■□□□□ 0.06
CDK5RAP3-205ENST00000577802 RNF26Q9BY78 433 aaPredicted RBP15.43■□□□□ 0.06
CDK5RAP3-205ENST00000577802 GLIS2Q9BZE0 524 aaPredicted RBP15.43■□□□□ 0.06
CDK5RAP3-205ENST00000577802 POLR2AP24928 1970 aaKnown RBP15.43■□□□□ 0.06
CDK5RAP3-205ENST00000577802 DEXIO95424 95 aa15.42■□□□□ 0.06
CDK5RAP3-205ENST00000577802 FMNL1O95466 1100 aaPredicted RBP15.42■□□□□ 0.06
CDK5RAP3-205ENST00000577802 SNHG28P0DPA3 235 aa15.42■□□□□ 0.06
CDK5RAP3-205ENST00000577802 PDHBP11177 359 aa15.42■□□□□ 0.06
CDK5RAP3-205ENST00000577802 XBP1P17861 261 aa15.42■□□□□ 0.06
CDK5RAP3-205ENST00000577802 MAP3K11Q16584 847 aa15.42■□□□□ 0.06
CDK5RAP3-205ENST00000577802 CCDC96Q2M329 555 aa15.42■□□□□ 0.06
CDK5RAP3-205ENST00000577802 RAB11FIP4Q86YS3 637 aa15.42■□□□□ 0.06
CDK5RAP3-205ENST00000577802 ZNF526Q8TF50 670 aaPredicted RBP15.42■□□□□ 0.06
CDK5RAP3-205ENST00000577802 LPAR1Q92633 364 aa15.42■□□□□ 0.06
CDK5RAP3-205ENST00000577802 GPBP1L1Q9HC44 474 aaPredicted RBP15.42■□□□□ 0.06
CDK5RAP3-205ENST00000577802 NMRK2Q9NPI5 230 aa15.42■□□□□ 0.06
CDK5RAP3-205ENST00000577802 TMX2Q9Y320 296 aa15.42■□□□□ 0.06
CDK5RAP3-205ENST00000577802 RAD21O60216 631 aa15.41■□□□□ 0.06
CDK5RAP3-205ENST00000577802 SLURP2P0DP57 97 aa15.41■□□□□ 0.06
CDK5RAP3-205ENST00000577802 CDC27P30260 824 aa15.41■□□□□ 0.06
CDK5RAP3-205ENST00000577802 INPP5BP32019 993 aa15.41■□□□□ 0.06
CDK5RAP3-205ENST00000577802 SLC1A4P43007 532 aa15.41■□□□□ 0.06
CDK5RAP3-205ENST00000577802 MAP3K9P80192 1104 aa15.41■□□□□ 0.06
CDK5RAP3-205ENST00000577802 TRIM29Q14134 588 aa15.41■□□□□ 0.06
CDK5RAP3-205ENST00000577802 RRP1BQ14684 758 aaKnown RBP15.41■□□□□ 0.06
CDK5RAP3-205ENST00000577802 PRAMEF18Q5VWM3 479 aa15.41■□□□□ 0.06
CDK5RAP3-205ENST00000577802 SLFN13Q68D06 897 aa15.41■□□□□ 0.06
CDK5RAP3-205ENST00000577802 CHADLQ6NUI6 762 aa15.41■□□□□ 0.06
CDK5RAP3-205ENST00000577802 CLEC10AQ8IUN9 316 aa15.41■□□□□ 0.06
CDK5RAP3-205ENST00000577802 FAM177A1Q8N128 213 aaPredicted RBP15.41■□□□□ 0.06
CDK5RAP3-205ENST00000577802 WDR18Q9BV38 432 aa15.41■□□□□ 0.06
CDK5RAP3-205ENST00000577802 SPZ1Q9BXG8 430 aa15.41■□□□□ 0.06
CDK5RAP3-205ENST00000577802 ORC3Q9UBD5 711 aaPredicted RBP15.41■□□□□ 0.06
CDK5RAP3-205ENST00000577802 SEC63Q9UGP8 760 aaKnown RBP15.41■□□□□ 0.06
CDK5RAP3-205ENST00000577802 ISY1Q9ULR0 285 aaKnown RBP15.41■□□□□ 0.06
CDK5RAP3-205ENST00000577802 WDR33Q9C0J8 1336 aaKnown RBP15.41■□□□□ 0.06
CDK5RAP3-205ENST00000577802 PALM3A6NDB9 673 aaPredicted RBP15.4■□□□□ 0.06
CDK5RAP3-205ENST00000577802 hCG_1984214I3L0E3 225 aa15.4■□□□□ 0.06
CDK5RAP3-205ENST00000577802 ADD1P35611 737 aaKnown RBP15.4■□□□□ 0.06
CDK5RAP3-205ENST00000577802 ZNF543Q08ER8 600 aa15.4■□□□□ 0.06
CDK5RAP3-205ENST00000577802 MAP1SQ66K74 1059 aaPredicted RBP15.4■□□□□ 0.06
CDK5RAP3-205ENST00000577802 ZNF713Q8N859 430 aaPredicted RBP15.4■□□□□ 0.06
CDK5RAP3-205ENST00000577802 RBM46Q8TBY0 533 aaKnown RBP15.4■□□□□ 0.06
CDK5RAP3-205ENST00000577802 SLC26A6Q9BXS9 759 aa15.4■□□□□ 0.06
CDK5RAP3-205ENST00000577802 KIAA1683Q9H0B3 1180 aa15.4■□□□□ 0.06
CDK5RAP3-205ENST00000577802 VCPKMTQ9H867 229 aa15.4■□□□□ 0.06
CDK5RAP3-205ENST00000577802 MAD2L2Q9UI95 211 aa15.4■□□□□ 0.06
CDK5RAP3-205ENST00000577802 MTMR7Q9Y216 660 aa15.4■□□□□ 0.06
CDK5RAP3-205ENST00000577802 CNTNAP5Q8WYK1 1306 aa15.4■□□□□ 0.06
CDK5RAP3-205ENST00000577802 MYH6P13533 1939 aa15.39■□□□□ 0.05
CDK5RAP3-205ENST00000577802 C19orf81C9J6K1 198 aa15.39■□□□□ 0.05
CDK5RAP3-205ENST00000577802 USP17L10C9JJH3 530 aa15.39■□□□□ 0.05
CDK5RAP3-205ENST00000577802 KLRF2D3W0D1 207 aa15.39■□□□□ 0.05
CDK5RAP3-205ENST00000577802 F5H6K3 240 aa15.39■□□□□ 0.05
CDK5RAP3-205ENST00000577802 H3BQV1 296 aa15.39■□□□□ 0.05
CDK5RAP3-205ENST00000577802 WDR46O15213 610 aaKnown RBP15.39■□□□□ 0.05
CDK5RAP3-205ENST00000577802 JAK2O60674 1132 aa15.39■□□□□ 0.05
CDK5RAP3-205ENST00000577802 USP2O75604 605 aaPredicted RBP15.39■□□□□ 0.05
CDK5RAP3-205ENST00000577802 CTDNEP1O95476 244 aa15.39■□□□□ 0.05
CDK5RAP3-205ENST00000577802 PTPRAP18433 802 aa15.39■□□□□ 0.05
CDK5RAP3-205ENST00000577802 DDIT3P35638 169 aa15.39■□□□□ 0.05
CDK5RAP3-205ENST00000577802 KLRC3Q07444 240 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms