RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 MTMR4Q9NYA4 1195 aa22.94■■□□□ 1.26
SS18-208ENST00000577751 MORF4L1Q9UBU8 362 aa22.94■■□□□ 1.26
SS18-208ENST00000577751 MYH4Q9Y623 1939 aa22.94■■□□□ 1.26
SS18-208ENST00000577751 GNRH1P01148 92 aa22.93■■□□□ 1.26
SS18-208ENST00000577751 TSPY3P0CV98 308 aa22.93■■□□□ 1.26
SS18-208ENST00000577751 TSPY8P0CW00 308 aa22.93■■□□□ 1.26
SS18-208ENST00000577751 FAM47AQ5JRC9 791 aa22.93■■□□□ 1.26
SS18-208ENST00000577751 POTEEQ6S8J3 1075 aa22.93■■□□□ 1.26
SS18-208ENST00000577751 MKL1Q969V6 931 aa22.93■■□□□ 1.26
SS18-208ENST00000577751 CEP95Q96GE4 821 aa22.93■■□□□ 1.26
SS18-208ENST00000577751 RPAP3Q9H6T3 665 aaPredicted RBP22.93■■□□□ 1.26
SS18-208ENST00000577751 PPP4R2Q9NY27 417 aa22.93■■□□□ 1.26
SS18-208ENST00000577751 PTPN22Q9Y2R2 807 aa22.93■■□□□ 1.26
SS18-208ENST00000577751 RLFQ13129 1914 aa22.92■■□□□ 1.26
SS18-208ENST00000577751 SGSM2O43147 1006 aa22.92■■□□□ 1.26
SS18-208ENST00000577751 PCP11498 1178 aaKnown RBP22.92■■□□□ 1.26
SS18-208ENST00000577751 PSMC4P43686 418 aa22.92■■□□□ 1.26
SS18-208ENST00000577751 HAND2P61296 217 aa22.92■■□□□ 1.26
SS18-208ENST00000577751 ATP2B2Q01814 1243 aa22.92■■□□□ 1.26
SS18-208ENST00000577751 TRIM47Q96LD4 638 aa22.92■■□□□ 1.26
SS18-208ENST00000577751 RBPJLQ9UBG7 517 aa22.92■■□□□ 1.26
SS18-208ENST00000577751 ZNF213O14771 459 aa22.91■■□□□ 1.26
SS18-208ENST00000577751 AKNAD1Q5T1N1 836 aa22.91■■□□□ 1.26
SS18-208ENST00000577751 IFFO2Q5TF58 517 aa22.91■■□□□ 1.26
SS18-208ENST00000577751 LBX2Q6XYB7 198 aa22.91■■□□□ 1.26
SS18-208ENST00000577751 GTF3C2Q8WUA4 911 aaPredicted RBP22.91■■□□□ 1.26
SS18-208ENST00000577751 STAG1Q8WVM7 1258 aa22.91■■□□□ 1.26
SS18-208ENST00000577751 TXNRD2Q9NNW7 524 aa22.91■■□□□ 1.26
SS18-208ENST00000577751 CLIP2Q9UDT6 1046 aa22.91■■□□□ 1.26
SS18-208ENST00000577751 SYNPO2Q9UMS6 1093 aa22.91■■□□□ 1.26
SS18-208ENST00000577751 PARP14Q460N5 1801 aa22.9■■□□□ 1.26
SS18-208ENST00000577751 TSPY2A6NKD2 308 aa22.9■■□□□ 1.26
SS18-208ENST00000577751 WDR46O15213 610 aaKnown RBP22.9■■□□□ 1.26
SS18-208ENST00000577751 TTLL1O95922 423 aa22.9■■□□□ 1.26
SS18-208ENST00000577751 TBC1D10CQ8IV04 446 aa22.9■■□□□ 1.26
SS18-208ENST00000577751 SPICE1Q8N0Z3 855 aa22.9■■□□□ 1.26
SS18-208ENST00000577751 GOPCQ9HD26 462 aa22.9■■□□□ 1.26
SS18-208ENST00000577751 IL17RBQ9NRM6 502 aa22.9■■□□□ 1.26
SS18-208ENST00000577751 CTNNA3Q9UI47 895 aa22.9■■□□□ 1.26
SS18-208ENST00000577751 HPS5Q9UPZ3 1129 aa22.9■■□□□ 1.26
SS18-208ENST00000577751 RANBP6O60518 1105 aaKnown RBP22.89■■□□□ 1.25
SS18-208ENST00000577751 NOVP48745 357 aa22.89■■□□□ 1.25
SS18-208ENST00000577751 PRMT2P55345 433 aa22.89■■□□□ 1.25
SS18-208ENST00000577751 FCGRTP55899 365 aa22.89■■□□□ 1.25
SS18-208ENST00000577751 COG2Q14746 738 aa22.89■■□□□ 1.25
SS18-208ENST00000577751 SPDYE16A6NNV3 312 aaPredicted RBP22.88■■□□□ 1.25
SS18-208ENST00000577751 F5H6K3 240 aa22.88■■□□□ 1.25
SS18-208ENST00000577751 FMNL1O95466 1100 aaPredicted RBP22.88■■□□□ 1.25
SS18-208ENST00000577751 KLRC3Q07444 240 aa22.88■■□□□ 1.25
SS18-208ENST00000577751 MFSD6Q6ZSS7 791 aa22.88■■□□□ 1.25
SS18-208ENST00000577751 RNF41Q9H4P4 317 aaPredicted RBP22.88■■□□□ 1.25
SS18-208ENST00000577751 HOXC10Q9NYD6 342 aa22.88■■□□□ 1.25
SS18-208ENST00000577751 RABGAP1Q9Y3P9 1069 aa22.88■■□□□ 1.25
SS18-208ENST00000577751 PEX10O60683 326 aa22.87■■□□□ 1.25
SS18-208ENST00000577751 ECM2O94769 699 aaPredicted RBP22.87■■□□□ 1.25
SS18-208ENST00000577751 HOXD10P28358 340 aa22.87■■□□□ 1.25
SS18-208ENST00000577751 PTH1RQ03431 593 aa22.87■■□□□ 1.25
SS18-208ENST00000577751 IMMTQ16891 758 aaKnown RBP22.87■■□□□ 1.25
SS18-208ENST00000577751 Q3C1V9 767 aa22.87■■□□□ 1.25
SS18-208ENST00000577751 PPP4R3BQ5MIZ7 849 aa22.87■■□□□ 1.25
SS18-208ENST00000577751 GPRC5AQ8NFJ5 357 aa22.87■■□□□ 1.25
SS18-208ENST00000577751 TANGO6Q9C0B7 1094 aa22.87■■□□□ 1.25
SS18-208ENST00000577751 TCP11L1Q9NUJ3 509 aa22.87■■□□□ 1.25
SS18-208ENST00000577751 SRRDQ9UH36 339 aa22.87■■□□□ 1.25
SS18-208ENST00000577751 MYPNQ86TC9 1320 aa22.86■■□□□ 1.25
SS18-208ENST00000577751 DOCK3Q8IZD9 2030 aa22.86■■□□□ 1.25
SS18-208ENST00000577751 A0A0G2JMZ2 1700 aa22.86■■□□□ 1.25
SS18-208ENST00000577751 CNMDO75829 334 aa22.86■■□□□ 1.25
SS18-208ENST00000577751 NT5C2P49902 561 aa22.86■■□□□ 1.25
SS18-208ENST00000577751 ERVK-9P63128 1117 aa22.86■■□□□ 1.25
SS18-208ENST00000577751 ERVK-24P63145 666 aa22.86■■□□□ 1.25
SS18-208ENST00000577751 RRP12Q5JTH9 1297 aaKnown RBP22.86■■□□□ 1.25
SS18-208ENST00000577751 GMCL1P1Q8NEA9 526 aa22.86■■□□□ 1.25
SS18-208ENST00000577751 NKX2-3Q8TAU0 364 aa22.86■■□□□ 1.25
SS18-208ENST00000577751 TOMM22Q9NS69 142 aa22.86■■□□□ 1.25
SS18-208ENST00000577751 NMT2O60551 498 aa22.85■■□□□ 1.25
SS18-208ENST00000577751 NDUFB10O96000 172 aa22.85■■□□□ 1.25
SS18-208ENST00000577751 DSG3P32926 999 aa22.85■■□□□ 1.25
SS18-208ENST00000577751 PTCH2Q9Y6C5 1203 aa22.85■■□□□ 1.25
SS18-208ENST00000577751 NEDD4P46934 1319 aa22.84■■□□□ 1.25
SS18-208ENST00000577751 HTTP42858 3142 aa22.84■■□□□ 1.25
SS18-208ENST00000577751 TNPO2O14787 897 aaKnown RBP22.84■■□□□ 1.25
SS18-208ENST00000577751 FAM83BQ5T0W9 1011 aa22.84■■□□□ 1.25
SS18-208ENST00000577751 LRRC47Q8N1G4 583 aaKnown RBP22.84■■□□□ 1.25
SS18-208ENST00000577751 MAP4K1Q92918 833 aa22.84■■□□□ 1.25
SS18-208ENST00000577751 ESYT1Q9BSJ8 1104 aa22.84■■□□□ 1.25
SS18-208ENST00000577751 PAGR1Q9BTK6 254 aa22.84■■□□□ 1.25
SS18-208ENST00000577751 BTBD7Q9P203 1132 aa22.84■■□□□ 1.25
SS18-208ENST00000577751 ADAMTS5Q9UNA0 930 aa22.84■■□□□ 1.25
SS18-208ENST00000577751 RAD21O60216 631 aa22.83■■□□□ 1.25
SS18-208ENST00000577751 FLOT1O75955 427 aa22.83■■□□□ 1.25
SS18-208ENST00000577751 PRKCZQ05513 592 aa22.83■■□□□ 1.25
SS18-208ENST00000577751 GABRQQ9UN88 632 aa22.83■■□□□ 1.25
SS18-208ENST00000577751 STX8Q9UNK0 236 aa22.83■■□□□ 1.25
SS18-208ENST00000577751 U3KPZ7 1027 aaPredicted RBP22.83■■□□□ 1.25
SS18-208ENST00000577751 CCDC85CA6NKD9 419 aa22.82■■□□□ 1.24
SS18-208ENST00000577751 ESR2Q92731 530 aa22.82■■□□□ 1.24
SS18-208ENST00000577751 COA7Q96BR5 231 aa22.82■■□□□ 1.24
SS18-208ENST00000577751 NUP88Q99567 741 aaPredicted RBP22.82■■□□□ 1.24
SS18-208ENST00000577751 FBXO28Q9NVF7 368 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms