RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 SCYL1Q96KG9 808 aa9.73□□□□□ -0.85
CDH8-203ENST00000577390 CAND2O75155 1236 aa9.72□□□□□ -0.85
CDH8-203ENST00000577390 SERPINI2O75830 405 aa9.72□□□□□ -0.85
CDH8-203ENST00000577390 CCT4P50991 539 aaKnown RBP9.72□□□□□ -0.85
CDH8-203ENST00000577390 LMBR1Q8WVP7 490 aa9.72□□□□□ -0.85
CDH8-203ENST00000577390 MCUR1Q96AQ8 359 aa9.72□□□□□ -0.85
CDH8-203ENST00000577390 SEL1L2Q5TEA6 688 aa9.72□□□□□ -0.85
CDH8-203ENST00000577390 DPY19L2Q6NUT2 758 aa9.72□□□□□ -0.85
CDH8-203ENST00000577390 ARMC9Q7Z3E5 817 aa9.72□□□□□ -0.85
CDH8-203ENST00000577390 PACS2Q86VP3 889 aa9.72□□□□□ -0.85
CDH8-203ENST00000577390 MICU3Q86XE3 530 aa9.72□□□□□ -0.85
CDH8-203ENST00000577390 GDAP1Q8TB36 358 aa9.72□□□□□ -0.85
CDH8-203ENST00000577390 APOEP02649 317 aa9.72□□□□□ -0.85
CDH8-203ENST00000577390 ZC3H12BQ5HYM0 836 aaKnown RBP9.72□□□□□ -0.85
CDH8-203ENST00000577390 PAGR1Q9BTK6 254 aa9.72□□□□□ -0.85
CDH8-203ENST00000577390 GNGT2O14610 69 aa9.72□□□□□ -0.85
CDH8-203ENST00000577390 SEC31AO94979 1220 aaKnown RBP9.72□□□□□ -0.85
CDH8-203ENST00000577390 NAPAP54920 295 aa9.72□□□□□ -0.85
CDH8-203ENST00000577390 ADCY2Q08462 1091 aa9.72□□□□□ -0.85
CDH8-203ENST00000577390 TEX14Q8IWB6 1497 aa9.72□□□□□ -0.85
CDH8-203ENST00000577390 PPP1R42Q7Z4L9 355 aa9.72□□□□□ -0.85
CDH8-203ENST00000577390 CFTRP13569 1480 aa9.72□□□□□ -0.85
CDH8-203ENST00000577390 MYH1P12882 1939 aa9.72□□□□□ -0.85
CDH8-203ENST00000577390 MYH4Q9Y623 1939 aa9.72□□□□□ -0.85
CDH8-203ENST00000577390 NANOGNBQ7Z5D8 188 aa9.72□□□□□ -0.85
CDH8-203ENST00000577390 LRRC8AQ8IWT6 810 aa9.72□□□□□ -0.85
CDH8-203ENST00000577390 MTRF1LQ9UGC7 380 aaKnown RBP9.72□□□□□ -0.85
CDH8-203ENST00000577390 IPO11Q9UI26 975 aaKnown RBP9.72□□□□□ -0.85
CDH8-203ENST00000577390 USP19O94966 1318 aa9.72□□□□□ -0.85
CDH8-203ENST00000577390 MYCLP12524 364 aaPredicted RBP9.72□□□□□ -0.85
CDH8-203ENST00000577390 YARSP54577 528 aaKnown RBP9.72□□□□□ -0.85
CDH8-203ENST00000577390 LRMPQ12912 555 aa9.72□□□□□ -0.85
CDH8-203ENST00000577390 LONRF2Q1L5Z9 754 aa9.72□□□□□ -0.85
CDH8-203ENST00000577390 C16orf62Q7Z3J2 963 aa9.72□□□□□ -0.85
CDH8-203ENST00000577390 SESTD1Q86VW0 696 aa9.72□□□□□ -0.85
CDH8-203ENST00000577390 TCP11L2Q8N4U5 519 aa9.72□□□□□ -0.85
CDH8-203ENST00000577390 ZC3H12CQ9C0D7 883 aaKnown RBP9.72□□□□□ -0.85
CDH8-203ENST00000577390 NKIRAS1Q9NYS0 192 aa9.72□□□□□ -0.85
CDH8-203ENST00000577390 CROCCQ5TZA2 2017 aa9.72□□□□□ -0.85
CDH8-203ENST00000577390 RAPGEF1Q13905 1077 aa9.71□□□□□ -0.85
CDH8-203ENST00000577390 FAN1Q9Y2M0 1017 aa9.71□□□□□ -0.85
CDH8-203ENST00000577390 ANKRD30BQ9BXX2 1392 aa9.71□□□□□ -0.85
CDH8-203ENST00000577390 Q3C1V9 767 aa9.71□□□□□ -0.85
CDH8-203ENST00000577390 CCHCR1Q8TD31 782 aa9.71□□□□□ -0.85
CDH8-203ENST00000577390 L3MBTL3Q96JM7 780 aaPredicted RBP9.71□□□□□ -0.85
CDH8-203ENST00000577390 BCORL1Q5H9F3 1711 aa9.71□□□□□ -0.85
CDH8-203ENST00000577390 TRAPPC10P48553 1259 aa9.71□□□□□ -0.85
CDH8-203ENST00000577390 MAEAQ7L5Y9 396 aa9.71□□□□□ -0.85
CDH8-203ENST00000577390 BCAS4Q8TDM0 211 aa9.71□□□□□ -0.85
CDH8-203ENST00000577390 BOLA2Q9H3K6 86 aa9.71□□□□□ -0.85
CDH8-203ENST00000577390 RGL1Q9NZL6 768 aa9.71□□□□□ -0.85
CDH8-203ENST00000577390 ZNF18P17022 549 aa9.71□□□□□ -0.85
CDH8-203ENST00000577390 PLEKHA4Q9H4M7 779 aa9.71□□□□□ -0.85
CDH8-203ENST00000577390 ACTR5Q9H9F9 607 aaPredicted RBP9.71□□□□□ -0.85
CDH8-203ENST00000577390 WBP4O75554 376 aaKnown RBP9.71□□□□□ -0.86
CDH8-203ENST00000577390 AFMP43652 599 aa9.71□□□□□ -0.86
CDH8-203ENST00000577390 KRT83P78385 493 aa9.71□□□□□ -0.86
CDH8-203ENST00000577390 WASHC5Q12768 1159 aa9.71□□□□□ -0.86
CDH8-203ENST00000577390 PATL1Q86TB9 770 aaKnown RBP9.71□□□□□ -0.86
CDH8-203ENST00000577390 TRIM58Q8NG06 486 aa9.71□□□□□ -0.86
CDH8-203ENST00000577390 ZFYVE19Q96K21 471 aa9.71□□□□□ -0.86
CDH8-203ENST00000577390 PYM1Q9BRP8 204 aaKnown RBP9.71□□□□□ -0.86
CDH8-203ENST00000577390 HOMER3Q9NSC5 361 aa9.71□□□□□ -0.86
CDH8-203ENST00000577390 BIVM-ERCC5R4GMW8 1640 aa9.71□□□□□ -0.86
CDH8-203ENST00000577390 RNF40O75150 1001 aa9.71□□□□□ -0.86
CDH8-203ENST00000577390 CCDC102BQ68D86 513 aa9.71□□□□□ -0.86
CDH8-203ENST00000577390 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.71□□□□□ -0.86
CDH8-203ENST00000577390 CCDC124Q96CT7 223 aaKnown RBP9.71□□□□□ -0.86
CDH8-203ENST00000577390 VMP1Q96GC9 406 aa9.71□□□□□ -0.86
CDH8-203ENST00000577390 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.71□□□□□ -0.86
CDH8-203ENST00000577390 DAB2P98082 770 aa9.71□□□□□ -0.86
CDH8-203ENST00000577390 TMEM57Q8N5G2 664 aa9.71□□□□□ -0.86
CDH8-203ENST00000577390 RAD18Q9NS91 495 aa9.71□□□□□ -0.86
CDH8-203ENST00000577390 USP16Q9Y5T5 823 aa9.71□□□□□ -0.86
CDH8-203ENST00000577390 MMEL1Q495T6 779 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 CC2D1AQ6P1N0 951 aaPredicted RBP9.7□□□□□ -0.86
CDH8-203ENST00000577390 FAM43BQ6ZT52 329 aaPredicted RBP9.7□□□□□ -0.86
CDH8-203ENST00000577390 ZNF804AQ7Z570 1209 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 ANKLE2Q86XL3 938 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 OSBPL9Q96SU4 736 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 PRXQ9BXM0 1461 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 TMEM247A6NEH6 219 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 N4BP3O15049 544 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 TRIM27P14373 513 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 PAX7P23759 505 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 FERMT3Q86UX7 667 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 TEKT4Q8WW24 435 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 RIC8AQ9NPQ8 531 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 SMYD2Q9NRG4 433 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 KIF20BQ96Q89 1820 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 NLRP1Q9C000 1473 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 ZYXQ15942 572 aaKnown RBP9.7□□□□□ -0.86
CDH8-203ENST00000577390 ARHGAP24Q8N264 748 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 SLC26A6Q9BXS9 759 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 CAPZA2P47755 286 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 CUL3Q13618 768 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 APLFQ8IW19 511 aaPredicted RBP9.7□□□□□ -0.86
CDH8-203ENST00000577390 GSDMAQ96QA5 445 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 CARD6Q9BX69 1037 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 ITGB1BP2Q9UKP3 347 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms