RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 MOGSQ13724 837 aa10.08□□□□□ -0.8
NUP88-211ENST00000575976 SEC23AQ15436 765 aa10.08□□□□□ -0.8
NUP88-211ENST00000575976 CCL15Q16663 113 aa10.08□□□□□ -0.8
NUP88-211ENST00000575976 SH3D19Q5HYK7 790 aa10.08□□□□□ -0.8
NUP88-211ENST00000575976 KIAA1755Q5JYT7 1200 aa10.08□□□□□ -0.8
NUP88-211ENST00000575976 PRPF38BQ5VTL8 546 aaKnown RBP10.08□□□□□ -0.8
NUP88-211ENST00000575976 RCSD1Q6JBY9 416 aa10.08□□□□□ -0.8
NUP88-211ENST00000575976 DHX32Q7L7V1 743 aaKnown RBP10.08□□□□□ -0.8
NUP88-211ENST00000575976 PRRT2Q7Z6L0 340 aaPredicted RBP10.08□□□□□ -0.8
NUP88-211ENST00000575976 LRRC47Q8N1G4 583 aaKnown RBP10.08□□□□□ -0.8
NUP88-211ENST00000575976 BRI3BPQ8WY22 251 aa10.08□□□□□ -0.8
NUP88-211ENST00000575976 MKL1Q969V6 931 aa10.08□□□□□ -0.8
NUP88-211ENST00000575976 UBAC1Q9BSL1 405 aa10.08□□□□□ -0.8
NUP88-211ENST00000575976 C22orf23Q9BZE7 217 aa10.08□□□□□ -0.8
NUP88-211ENST00000575976 EMILIN3Q9NT22 766 aa10.08□□□□□ -0.8
NUP88-211ENST00000575976 STX8Q9UNK0 236 aa10.08□□□□□ -0.8
NUP88-211ENST00000575976 PHIPQ8WWQ0 1821 aa10.07□□□□□ -0.8
NUP88-211ENST00000575976 F5H6K3 240 aa10.07□□□□□ -0.8
NUP88-211ENST00000575976 IFIT3O14879 490 aaKnown RBP10.07□□□□□ -0.8
NUP88-211ENST00000575976 HMGB1P09429 215 aaKnown RBP10.07□□□□□ -0.8
NUP88-211ENST00000575976 CETPP11597 493 aa10.07□□□□□ -0.8
NUP88-211ENST00000575976 CASTP20810 708 aaKnown RBP10.07□□□□□ -0.8
NUP88-211ENST00000575976 PSMA5P28066 241 aa10.07□□□□□ -0.8
NUP88-211ENST00000575976 RBM25P49756 843 aaKnown RBP10.07□□□□□ -0.8
NUP88-211ENST00000575976 HMGCS2P54868 508 aa10.07□□□□□ -0.8
NUP88-211ENST00000575976 ANAPC15P60006 121 aa10.07□□□□□ -0.8
NUP88-211ENST00000575976 EXOSC10Q01780 885 aaKnown RBP10.07□□□□□ -0.8
NUP88-211ENST00000575976 KLRC3Q07444 240 aa10.07□□□□□ -0.8
NUP88-211ENST00000575976 CCDC178Q5BJE1 867 aa10.07□□□□□ -0.8
NUP88-211ENST00000575976 PPP4R3BQ5MIZ7 849 aa10.07□□□□□ -0.8
NUP88-211ENST00000575976 GPAT2Q6NUI2 795 aa10.07□□□□□ -0.8
NUP88-211ENST00000575976 BLOC1S2Q6QNY1 142 aa10.07□□□□□ -0.8
NUP88-211ENST00000575976 USP17L2Q6R6M4 530 aa10.07□□□□□ -0.8
NUP88-211ENST00000575976 POTEHQ6S545 545 aa10.07□□□□□ -0.8
NUP88-211ENST00000575976 GADL1Q6ZQY3 521 aa10.07□□□□□ -0.8
NUP88-211ENST00000575976 DGKHQ86XP1 1220 aa10.07□□□□□ -0.8
NUP88-211ENST00000575976 ENAHQ8N8S7 591 aaPredicted RBP10.07□□□□□ -0.8
NUP88-211ENST00000575976 IGDCC4Q8TDY8 1250 aa10.07□□□□□ -0.8
NUP88-211ENST00000575976 ANKS1AQ92625 1134 aa10.07□□□□□ -0.8
NUP88-211ENST00000575976 C12orf42Q96LP6 360 aa10.07□□□□□ -0.8
NUP88-211ENST00000575976 TCEANC2Q96MN5 208 aa10.07□□□□□ -0.8
NUP88-211ENST00000575976 TTC14Q96N46 770 aa10.07□□□□□ -0.8
NUP88-211ENST00000575976 PTPN18Q99952 460 aa10.07□□□□□ -0.8
NUP88-211ENST00000575976 TMEM47Q9BQJ4 181 aa10.07□□□□□ -0.8
NUP88-211ENST00000575976 LRRC2Q9BYS8 371 aa10.07□□□□□ -0.8
NUP88-211ENST00000575976 TM6SF1Q9BZW5 370 aa10.07□□□□□ -0.8
NUP88-211ENST00000575976 SH2D4AQ9H788 454 aa10.07□□□□□ -0.8
NUP88-211ENST00000575976 VCPKMTQ9H867 229 aa10.07□□□□□ -0.8
NUP88-211ENST00000575976 UPF2Q9HAU5 1272 aaKnown RBP10.07□□□□□ -0.8
NUP88-211ENST00000575976 SENP2Q9HC62 589 aa10.07□□□□□ -0.8
NUP88-211ENST00000575976 ZSWIM6Q9HCJ5 1215 aa10.07□□□□□ -0.8
NUP88-211ENST00000575976 GPHNQ9NQX3 736 aaPredicted RBP10.07□□□□□ -0.8
NUP88-211ENST00000575976 CASP8AP2Q9UKL3 1982 aa10.06□□□□□ -0.8
NUP88-211ENST00000575976 ERICH2A1L162 156 aa10.06□□□□□ -0.8
NUP88-211ENST00000575976 SH2B2O14492 632 aaPredicted RBP10.06□□□□□ -0.8
NUP88-211ENST00000575976 RAD21O60216 631 aa10.06□□□□□ -0.8
NUP88-211ENST00000575976 TOP1P11387 765 aaKnown RBP10.06□□□□□ -0.8
NUP88-211ENST00000575976 RPS6KB1P23443 525 aa10.06□□□□□ -0.8
NUP88-211ENST00000575976 TM4SF4P48230 202 aa10.06□□□□□ -0.8
NUP88-211ENST00000575976 USP14P54578 494 aa10.06□□□□□ -0.8
NUP88-211ENST00000575976 INHBEP58166 350 aa10.06□□□□□ -0.8
NUP88-211ENST00000575976 WTAPQ15007 396 aa10.06□□□□□ -0.8
NUP88-211ENST00000575976 TMEM67Q5HYA8 995 aa10.06□□□□□ -0.8
NUP88-211ENST00000575976 IFIT1BQ5T764 474 aaKnown RBP10.06□□□□□ -0.8
NUP88-211ENST00000575976 FASTKD5Q7L8L6 764 aaKnown RBP10.06□□□□□ -0.8
NUP88-211ENST00000575976 CHMP4CQ96CF2 233 aa10.06□□□□□ -0.8
NUP88-211ENST00000575976 IL17RAQ96F46 866 aa10.06□□□□□ -0.8
NUP88-211ENST00000575976 TMEM87BQ96K49 555 aa10.06□□□□□ -0.8
NUP88-211ENST00000575976 MTA3Q9BTC8 594 aa10.06□□□□□ -0.8
NUP88-211ENST00000575976 UPF3BQ9BZI7 483 aaKnown RBP10.06□□□□□ -0.8
NUP88-211ENST00000575976 TMOD4Q9NZQ9 345 aa10.06□□□□□ -0.8
NUP88-211ENST00000575976 BTBD19C9JJ37 291 aa10.05□□□□□ -0.8
NUP88-211ENST00000575976 IGF2BP3O00425 579 aaKnown RBP eCLIP10.05□□□□□ -0.8
NUP88-211ENST00000575976 NDUFB10O96000 172 aa10.05□□□□□ -0.8
NUP88-211ENST00000575976 SREBF2Q12772 1141 aa10.05□□□□□ -0.8
NUP88-211ENST00000575976 SART3Q15020 963 aaKnown RBP10.05□□□□□ -0.8
NUP88-211ENST00000575976 TREML2Q5T2D2 321 aa10.05□□□□□ -0.8
NUP88-211ENST00000575976 SLFN13Q68D06 897 aa10.05□□□□□ -0.8
NUP88-211ENST00000575976 RUFY3Q7L099 469 aa10.05□□□□□ -0.8
NUP88-211ENST00000575976 IFNL1Q8IU54 200 aa10.05□□□□□ -0.8
NUP88-211ENST00000575976 SPICE1Q8N0Z3 855 aa10.05□□□□□ -0.8
NUP88-211ENST00000575976 FAM43AQ8N2R8 423 aa10.05□□□□□ -0.8
NUP88-211ENST00000575976 PROCA1Q8NCQ7 364 aaPredicted RBP10.05□□□□□ -0.8
NUP88-211ENST00000575976 GMCL1P1Q8NEA9 526 aa10.05□□□□□ -0.8
NUP88-211ENST00000575976 TBC1D32Q96NH3 1257 aa10.05□□□□□ -0.8
NUP88-211ENST00000575976 KIF2CQ99661 725 aa10.05□□□□□ -0.8
NUP88-211ENST00000575976 KAT14Q9H8E8 782 aa10.05□□□□□ -0.8
NUP88-211ENST00000575976 LY9Q9HBG7 655 aa10.05□□□□□ -0.8
NUP88-211ENST00000575976 GOPCQ9HD26 462 aa10.05□□□□□ -0.8
NUP88-211ENST00000575976 DAXXQ9UER7 740 aaPredicted RBP10.05□□□□□ -0.8
NUP88-211ENST00000575976 TSKSQ9UJT2 592 aa10.05□□□□□ -0.8
NUP88-211ENST00000575976 SYNPO2Q9UMS6 1093 aa10.05□□□□□ -0.8
NUP88-211ENST00000575976 AGTPBP1Q9UPW5 1226 aa10.05□□□□□ -0.8
NUP88-211ENST00000575976 MTMR7Q9Y216 660 aa10.05□□□□□ -0.8
NUP88-211ENST00000575976 CYP46A1Q9Y6A2 500 aa10.05□□□□□ -0.8
NUP88-211ENST00000575976 WDR19Q8NEZ3 1342 aa10.05□□□□□ -0.8
NUP88-211ENST00000575976 PDHXO00330 501 aa10.04□□□□□ -0.8
NUP88-211ENST00000575976 VCAM1P19320 739 aa10.04□□□□□ -0.8
NUP88-211ENST00000575976 LIFRP42702 1097 aa10.04□□□□□ -0.8
NUP88-211ENST00000575976 Q6ZUG5 572 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms