RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 ARHGAP39Q9C0H5 1083 aa16.12■□□□□ 0.17
CIITA-210ENST00000575513 RPAP3Q9H6T3 665 aaPredicted RBP16.12■□□□□ 0.17
CIITA-210ENST00000575513 GOPCQ9HD26 462 aa16.12■□□□□ 0.17
CIITA-210ENST00000575513 MTMR4Q9NYA4 1195 aa16.12■□□□□ 0.17
CIITA-210ENST00000575513 SRRDQ9UH36 339 aa16.12■□□□□ 0.17
CIITA-210ENST00000575513 RAD50Q92878 1312 aa16.12■□□□□ 0.17
CIITA-210ENST00000575513 WDR46O15213 610 aaKnown RBP16.11■□□□□ 0.17
CIITA-210ENST00000575513 TSPY3P0CV98 308 aa16.11■□□□□ 0.17
CIITA-210ENST00000575513 TSPY8P0CW00 308 aa16.11■□□□□ 0.17
CIITA-210ENST00000575513 CHMLP26374 656 aa16.11■□□□□ 0.17
CIITA-210ENST00000575513 CTGFP29279 349 aa16.11■□□□□ 0.17
CIITA-210ENST00000575513 COG2Q14746 738 aa16.11■□□□□ 0.17
CIITA-210ENST00000575513 STK11IPQ8N1F8 1099 aa16.11■□□□□ 0.17
CIITA-210ENST00000575513 GPRC5AQ8NFJ5 357 aa16.11■□□□□ 0.17
CIITA-210ENST00000575513 RBPJLQ9UBG7 517 aa16.11■□□□□ 0.17
CIITA-210ENST00000575513 CTNNA3Q9UI47 895 aa16.11■□□□□ 0.17
CIITA-210ENST00000575513 RABGAP1Q9Y3P9 1069 aa16.11■□□□□ 0.17
CIITA-210ENST00000575513 TTLL1O95922 423 aa16.1■□□□□ 0.17
CIITA-210ENST00000575513 TFAP4Q01664 338 aa16.1■□□□□ 0.17
CIITA-210ENST00000575513 CTDSPL2Q05D32 466 aa16.1■□□□□ 0.17
CIITA-210ENST00000575513 CLEC10AQ8IUN9 316 aa16.1■□□□□ 0.17
CIITA-210ENST00000575513 RNF41Q9H4P4 317 aaPredicted RBP16.1■□□□□ 0.17
CIITA-210ENST00000575513 MYPNQ86TC9 1320 aa16.1■□□□□ 0.17
CIITA-210ENST00000575513 ZNF213O14771 459 aa16.09■□□□□ 0.17
CIITA-210ENST00000575513 ATP2B2Q01814 1243 aa16.09■□□□□ 0.17
CIITA-210ENST00000575513 BMP2KLQ5H9B9 411 aa16.09■□□□□ 0.17
CIITA-210ENST00000575513 KIAA1755Q5JYT7 1200 aa16.09■□□□□ 0.17
CIITA-210ENST00000575513 NBPF11Q86T75 865 aa16.09■□□□□ 0.17
CIITA-210ENST00000575513 MB21D1Q8N884 522 aa16.09■□□□□ 0.17
CIITA-210ENST00000575513 COA7Q96BR5 231 aa16.09■□□□□ 0.17
CIITA-210ENST00000575513 ARMC5Q96C12 935 aa16.09■□□□□ 0.17
CIITA-210ENST00000575513 CEP95Q96GE4 821 aa16.09■□□□□ 0.17
CIITA-210ENST00000575513 CLIP2Q9UDT6 1046 aa16.09■□□□□ 0.17
CIITA-210ENST00000575513 TSPY2A6NKD2 308 aa16.08■□□□□ 0.16
CIITA-210ENST00000575513 CCDC85CA6NKD9 419 aa16.08■□□□□ 0.16
CIITA-210ENST00000575513 F5H6K3 240 aa16.08■□□□□ 0.16
CIITA-210ENST00000575513 TNPO2O14787 897 aaKnown RBP16.08■□□□□ 0.16
CIITA-210ENST00000575513 MAPK4P31152 587 aa16.08■□□□□ 0.16
CIITA-210ENST00000575513 NOVP48745 357 aa16.08■□□□□ 0.16
CIITA-210ENST00000575513 ERVK-9P63128 1117 aa16.08■□□□□ 0.16
CIITA-210ENST00000575513 ERVK-24P63145 666 aa16.08■□□□□ 0.16
CIITA-210ENST00000575513 CCNA1P78396 465 aa16.08■□□□□ 0.16
CIITA-210ENST00000575513 KLRC3Q07444 240 aa16.08■□□□□ 0.16
CIITA-210ENST00000575513 FAM47AQ5JRC9 791 aa16.08■□□□□ 0.16
CIITA-210ENST00000575513 AKNAD1Q5T1N1 836 aa16.08■□□□□ 0.16
CIITA-210ENST00000575513 POTEEQ6S8J3 1075 aa16.08■□□□□ 0.16
CIITA-210ENST00000575513 MFSD6Q6ZSS7 791 aa16.08■□□□□ 0.16
CIITA-210ENST00000575513 GMCL1P1Q8NEA9 526 aa16.08■□□□□ 0.16
CIITA-210ENST00000575513 STAG1Q8WVM7 1258 aa16.08■□□□□ 0.16
CIITA-210ENST00000575513 TANGO6Q9C0B7 1094 aa16.08■□□□□ 0.16
CIITA-210ENST00000575513 TXNRD2Q9NNW7 524 aa16.08■□□□□ 0.16
CIITA-210ENST00000575513 TCP11L1Q9NUJ3 509 aa16.08■□□□□ 0.16
CIITA-210ENST00000575513 SPDYE16A6NNV3 312 aaPredicted RBP16.07■□□□□ 0.16
CIITA-210ENST00000575513 SGSM2O43147 1006 aa16.07■□□□□ 0.16
CIITA-210ENST00000575513 RANBP6O60518 1105 aaKnown RBP16.07■□□□□ 0.16
CIITA-210ENST00000575513 DSG3P32926 999 aa16.07■□□□□ 0.16
CIITA-210ENST00000575513 IRF5Q13568 498 aa16.07■□□□□ 0.16
CIITA-210ENST00000575513 IMMTQ16891 758 aaKnown RBP16.07■□□□□ 0.16
CIITA-210ENST00000575513 SPICE1Q8N0Z3 855 aa16.07■□□□□ 0.16
CIITA-210ENST00000575513 INCENPQ9NQS7 918 aa16.07■□□□□ 0.16
CIITA-210ENST00000575513 ADAMTS5Q9UNA0 930 aa16.07■□□□□ 0.16
CIITA-210ENST00000575513 TACC3Q9Y6A5 838 aa16.07■□□□□ 0.16
CIITA-210ENST00000575513 PTCH2Q9Y6C5 1203 aa16.07■□□□□ 0.16
CIITA-210ENST00000575513 MYH8P13535 1937 aa16.07■□□□□ 0.16
CIITA-210ENST00000575513 GREB1LQ9C091 1923 aaPredicted RBP16.07■□□□□ 0.16
CIITA-210ENST00000575513 FLOT1O75955 427 aa16.06■□□□□ 0.16
CIITA-210ENST00000575513 Q3C1V9 767 aa16.06■□□□□ 0.16
CIITA-210ENST00000575513 SLC9C1Q4G0N8 1177 aa16.06■□□□□ 0.16
CIITA-210ENST00000575513 RAET1EQ8TD07 263 aa16.06■□□□□ 0.16
CIITA-210ENST00000575513 NBPF3Q9H094 633 aa16.06■□□□□ 0.16
CIITA-210ENST00000575513 IL25Q9H293 177 aa16.06■□□□□ 0.16
CIITA-210ENST00000575513 IL17RBQ9NRM6 502 aa16.06■□□□□ 0.16
CIITA-210ENST00000575513 HTTP42858 3142 aa16.05■□□□□ 0.16
CIITA-210ENST00000575513 CNMDO75829 334 aa16.05■□□□□ 0.16
CIITA-210ENST00000575513 FLT3LGP49771 235 aa16.05■□□□□ 0.16
CIITA-210ENST00000575513 HAND2P61296 217 aa16.05■□□□□ 0.16
CIITA-210ENST00000575513 PRKCZQ05513 592 aa16.05■□□□□ 0.16
CIITA-210ENST00000575513 PXYLP1Q8TE99 480 aa16.05■□□□□ 0.16
CIITA-210ENST00000575513 ESR2Q92731 530 aa16.05■□□□□ 0.16
CIITA-210ENST00000575513 TTC14Q96N46 770 aa16.05■□□□□ 0.16
CIITA-210ENST00000575513 PAGR1Q9BTK6 254 aa16.05■□□□□ 0.16
CIITA-210ENST00000575513 GJD2Q9UKL4 321 aa16.05■□□□□ 0.16
CIITA-210ENST00000575513 CAPN15O75808 1086 aa16.04■□□□□ 0.16
CIITA-210ENST00000575513 NDUFB10O96000 172 aa16.04■□□□□ 0.16
CIITA-210ENST00000575513 RGS19P49795 217 aa16.04■□□□□ 0.16
CIITA-210ENST00000575513 CCDC178Q5BJE1 867 aa16.04■□□□□ 0.16
CIITA-210ENST00000575513 TBC1D10CQ8IV04 446 aa16.04■□□□□ 0.16
CIITA-210ENST00000575513 CCAR1Q8IX12 1150 aaKnown RBP16.04■□□□□ 0.16
CIITA-210ENST00000575513 SLAIN1Q8ND83 568 aa16.04■□□□□ 0.16
CIITA-210ENST00000575513 ZNF333Q96JL9 665 aa16.04■□□□□ 0.16
CIITA-210ENST00000575513 TOMM22Q9NS69 142 aa16.04■□□□□ 0.16
CIITA-210ENST00000575513 BTBD7Q9P203 1132 aa16.04■□□□□ 0.16
CIITA-210ENST00000575513 GRK4P32298 578 aa16.03■□□□□ 0.16
CIITA-210ENST00000575513 RRP12Q5JTH9 1297 aaKnown RBP16.03■□□□□ 0.16
CIITA-210ENST00000575513 FAM83BQ5T0W9 1011 aa16.03■□□□□ 0.16
CIITA-210ENST00000575513 PRPF38AQ8NAV1 312 aaKnown RBP16.03■□□□□ 0.16
CIITA-210ENST00000575513 SHCBP1Q8NEM2 672 aa16.03■□□□□ 0.16
CIITA-210ENST00000575513 SOCS4Q8WXH5 440 aa16.03■□□□□ 0.16
CIITA-210ENST00000575513 MAP4K1Q92918 833 aa16.03■□□□□ 0.16
CIITA-210ENST00000575513 GMCL1Q96IK5 515 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms