RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 RILPL2Q969X0 211 aa10.36□□□□□ -0.75
SMG6-216ENST00000575176 ZNF333Q96JL9 665 aa10.36□□□□□ -0.75
SMG6-216ENST00000575176 NAPBQ9H115 298 aa10.36□□□□□ -0.75
SMG6-216ENST00000575176 PORCNQ9H237 461 aa10.36□□□□□ -0.75
SMG6-216ENST00000575176 RPAP3Q9H6T3 665 aaPredicted RBP10.36□□□□□ -0.75
SMG6-216ENST00000575176 SRRDQ9UH36 339 aa10.36□□□□□ -0.75
SMG6-216ENST00000575176 GJD2Q9UKL4 321 aa10.36□□□□□ -0.75
SMG6-216ENST00000575176 PNMA3Q9UL41 463 aa10.36□□□□□ -0.75
SMG6-216ENST00000575176 ADAMTS5Q9UNA0 930 aa10.36□□□□□ -0.75
SMG6-216ENST00000575176 TAF6LQ9Y6J9 622 aa10.36□□□□□ -0.75
SMG6-216ENST00000575176 MYH6P13533 1939 aa10.36□□□□□ -0.75
SMG6-216ENST00000575176 RAD50Q92878 1312 aa10.35□□□□□ -0.75
SMG6-216ENST00000575176 CHMLP26374 656 aa10.35□□□□□ -0.75
SMG6-216ENST00000575176 PSMC4P43686 418 aa10.35□□□□□ -0.75
SMG6-216ENST00000575176 GCLCP48506 637 aaPredicted RBP10.35□□□□□ -0.75
SMG6-216ENST00000575176 USP14P54578 494 aa10.35□□□□□ -0.75
SMG6-216ENST00000575176 COL9A3Q14050 684 aaPredicted RBP10.35□□□□□ -0.75
SMG6-216ENST00000575176 RCSD1Q6JBY9 416 aa10.35□□□□□ -0.75
SMG6-216ENST00000575176 CWC27Q6UX04 472 aaKnown RBP10.35□□□□□ -0.75
SMG6-216ENST00000575176 CENPQQ7L2Z9 268 aaPredicted RBP10.35□□□□□ -0.75
SMG6-216ENST00000575176 STK11IPQ8N1F8 1099 aa10.35□□□□□ -0.75
SMG6-216ENST00000575176 NEDD1Q8NHV4 660 aa10.35□□□□□ -0.75
SMG6-216ENST00000575176 MKL1Q969V6 931 aa10.35□□□□□ -0.75
SMG6-216ENST00000575176 CABP5Q9NP86 173 aa10.35□□□□□ -0.75
SMG6-216ENST00000575176 MTMR4Q9NYA4 1195 aa10.35□□□□□ -0.75
SMG6-216ENST00000575176 NYAP2Q9P242 653 aa10.35□□□□□ -0.75
SMG6-216ENST00000575176 MYPNQ86TC9 1320 aa10.34□□□□□ -0.75
SMG6-216ENST00000575176 USP17L15C9J2P7 530 aa10.34□□□□□ -0.75
SMG6-216ENST00000575176 USP17L13C9JLJ4 530 aa10.34□□□□□ -0.75
SMG6-216ENST00000575176 USP17L11C9JVI0 530 aa10.34□□□□□ -0.75
SMG6-216ENST00000575176 USP17L18D6R9N7 530 aa10.34□□□□□ -0.75
SMG6-216ENST00000575176 USP17L22D6RA61 530 aa10.34□□□□□ -0.75
SMG6-216ENST00000575176 USP17L17D6RBQ6 530 aa10.34□□□□□ -0.75
SMG6-216ENST00000575176 USP17L19D6RCP7 530 aa10.34□□□□□ -0.75
SMG6-216ENST00000575176 USP17L20D6RJB6 530 aa10.34□□□□□ -0.75
SMG6-216ENST00000575176 MPHOSPH10O00566 681 aaKnown RBP10.34□□□□□ -0.75
SMG6-216ENST00000575176 WDR46O15213 610 aaKnown RBP10.34□□□□□ -0.75
SMG6-216ENST00000575176 NMT2O60551 498 aa10.34□□□□□ -0.75
SMG6-216ENST00000575176 CAPN15O75808 1086 aa10.34□□□□□ -0.75
SMG6-216ENST00000575176 NDUFB10O96000 172 aa10.34□□□□□ -0.75
SMG6-216ENST00000575176 GNRH1P01148 92 aa10.34□□□□□ -0.75
SMG6-216ENST00000575176 ERVK-9P63128 1117 aa10.34□□□□□ -0.75
SMG6-216ENST00000575176 ERVK-24P63145 666 aa10.34□□□□□ -0.75
SMG6-216ENST00000575176 USP17L24Q0WX57 530 aa10.34□□□□□ -0.75
SMG6-216ENST00000575176 FAM47AQ5JRC9 791 aa10.34□□□□□ -0.75
SMG6-216ENST00000575176 SPICE1Q8N0Z3 855 aa10.34□□□□□ -0.75
SMG6-216ENST00000575176 SMCR8Q8TEV9 937 aaPredicted RBP10.34□□□□□ -0.75
SMG6-216ENST00000575176 LPAR1Q92633 364 aa10.34□□□□□ -0.75
SMG6-216ENST00000575176 SHISA4Q96DD7 197 aa10.34□□□□□ -0.75
SMG6-216ENST00000575176 FEZ1Q99689 392 aa10.34□□□□□ -0.75
SMG6-216ENST00000575176 DSCC1Q9BVC3 393 aa10.34□□□□□ -0.75
SMG6-216ENST00000575176 KANSL2Q9H9L4 492 aa10.34□□□□□ -0.75
SMG6-216ENST00000575176 FBXO28Q9NVF7 368 aa10.34□□□□□ -0.75
SMG6-216ENST00000575176 TMOD4Q9NZQ9 345 aa10.34□□□□□ -0.75
SMG6-216ENST00000575176 POTEFA5A3E0 1075 aa10.33□□□□□ -0.76
SMG6-216ENST00000575176 SGSM2O43147 1006 aa10.33□□□□□ -0.76
SMG6-216ENST00000575176 ECM2O94769 699 aaPredicted RBP10.33□□□□□ -0.76
SMG6-216ENST00000575176 SOX10P56693 466 aa10.33□□□□□ -0.76
SMG6-216ENST00000575176 IRX3P78415 501 aaPredicted RBP10.33□□□□□ -0.76
SMG6-216ENST00000575176 PTH1RQ03431 593 aa10.33□□□□□ -0.76
SMG6-216ENST00000575176 PABPC4Q13310 644 aaKnown RBP eCLIP10.33□□□□□ -0.76
SMG6-216ENST00000575176 IRF5Q13568 498 aa10.33□□□□□ -0.76
SMG6-216ENST00000575176 MORN1Q5T089 497 aa10.33□□□□□ -0.76
SMG6-216ENST00000575176 LRRC47Q8N1G4 583 aaKnown RBP10.33□□□□□ -0.76
SMG6-216ENST00000575176 GMCL1P1Q8NEA9 526 aa10.33□□□□□ -0.76
SMG6-216ENST00000575176 SH3TC2Q8TF17 1288 aa10.33□□□□□ -0.76
SMG6-216ENST00000575176 STAG1Q8WVM7 1258 aa10.33□□□□□ -0.76
SMG6-216ENST00000575176 ATG4CQ96DT6 458 aa10.33□□□□□ -0.76
SMG6-216ENST00000575176 DDRGK1Q96HY6 314 aa10.33□□□□□ -0.76
SMG6-216ENST00000575176 NUP88Q99567 741 aaPredicted RBP10.33□□□□□ -0.76
SMG6-216ENST00000575176 NACAP1Q9BZK3 213 aa10.33□□□□□ -0.76
SMG6-216ENST00000575176 ZBTB47Q9UFB7 747 aaPredicted RBP10.33□□□□□ -0.76
SMG6-216ENST00000575176 ZNF214Q9UL59 606 aaPredicted RBP10.33□□□□□ -0.76
SMG6-216ENST00000575176 SYNPO2Q9UMS6 1093 aa10.33□□□□□ -0.76
SMG6-216ENST00000575176 APPP05067 770 aa10.32□□□□□ -0.76
SMG6-216ENST00000575176 DSG3P32926 999 aa10.32□□□□□ -0.76
SMG6-216ENST00000575176 FLT3LGP49771 235 aa10.32□□□□□ -0.76
SMG6-216ENST00000575176 PRMT2P55345 433 aa10.32□□□□□ -0.76
SMG6-216ENST00000575176 FCGRTP55899 365 aa10.32□□□□□ -0.76
SMG6-216ENST00000575176 HAND2P61296 217 aa10.32□□□□□ -0.76
SMG6-216ENST00000575176 AMOTL1Q8IY63 956 aa10.32□□□□□ -0.76
SMG6-216ENST00000575176 ARHGEF10LQ9HCE6 1279 aa10.32□□□□□ -0.76
SMG6-216ENST00000575176 DIAPH3Q9NSV4 1193 aa10.32□□□□□ -0.76
SMG6-216ENST00000575176 RABGAP1Q9Y3P9 1069 aa10.32□□□□□ -0.76
SMG6-216ENST00000575176 LAMA3Q16787 3333 aa10.32□□□□□ -0.76
SMG6-216ENST00000575176 CEP290O15078 2479 aa10.31□□□□□ -0.76
SMG6-216ENST00000575176 CCDC85CA6NKD9 419 aa10.31□□□□□ -0.76
SMG6-216ENST00000575176 TFAP4Q01664 338 aa10.31□□□□□ -0.76
SMG6-216ENST00000575176 PDE4BQ07343 736 aa10.31□□□□□ -0.76
SMG6-216ENST00000575176 TMEM132BQ14DG7 1078 aa10.31□□□□□ -0.76
SMG6-216ENST00000575176 MTFR1Q15390 333 aa10.31□□□□□ -0.76
SMG6-216ENST00000575176 BMP2KLQ5H9B9 411 aa10.31□□□□□ -0.76
SMG6-216ENST00000575176 FAM83BQ5T0W9 1011 aa10.31□□□□□ -0.76
SMG6-216ENST00000575176 AKNAD1Q5T1N1 836 aa10.31□□□□□ -0.76
SMG6-216ENST00000575176 MAP3K21Q5TCX8 1036 aa10.31□□□□□ -0.76
SMG6-216ENST00000575176 STOX1Q6ZVD7 989 aa10.31□□□□□ -0.76
SMG6-216ENST00000575176 GPR142Q7Z601 462 aa10.31□□□□□ -0.76
SMG6-216ENST00000575176 GTF3C2Q8WUA4 911 aaPredicted RBP10.31□□□□□ -0.76
SMG6-216ENST00000575176 TRIB2Q92519 343 aa10.31□□□□□ -0.76
SMG6-216ENST00000575176 MKNK2Q9HBH9 465 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms