RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 GOPCQ9HD26 462 aa19.17■□□□□ 0.66
PFN1-203ENST00000574872 C8orf34Q49A92 452 aa19.16■□□□□ 0.66
PFN1-203ENST00000574872 CHST3Q7LGC8 479 aa19.16■□□□□ 0.66
PFN1-203ENST00000574872 IQCA1Q86XH1 822 aa19.16■□□□□ 0.66
PFN1-203ENST00000574872 USP26Q9BXU7 913 aa19.16■□□□□ 0.66
PFN1-203ENST00000574872 RPAP3Q9H6T3 665 aaPredicted RBP19.16■□□□□ 0.66
PFN1-203ENST00000574872 TCP11L1Q9NUJ3 509 aa19.16■□□□□ 0.66
PFN1-203ENST00000574872 SAGE1Q9NXZ1 904 aa19.16■□□□□ 0.66
PFN1-203ENST00000574872 MTMR7Q9Y216 660 aa19.16■□□□□ 0.66
PFN1-203ENST00000574872 CA12O43570 354 aa19.15■□□□□ 0.66
PFN1-203ENST00000574872 SEC24BO95487 1268 aa19.15■□□□□ 0.66
PFN1-203ENST00000574872 ZKSCAN1P17029 563 aaPredicted RBP19.15■□□□□ 0.66
PFN1-203ENST00000574872 HSPA4P34932 840 aa19.15■□□□□ 0.66
PFN1-203ENST00000574872 COL9A3Q14050 684 aaPredicted RBP19.15■□□□□ 0.66
PFN1-203ENST00000574872 PPP4R3BQ5MIZ7 849 aa19.15■□□□□ 0.66
PFN1-203ENST00000574872 MB21D2Q8IYB1 491 aaPredicted RBP19.15■□□□□ 0.66
PFN1-203ENST00000574872 ZSCAN10Q96SZ4 725 aaPredicted RBP19.15■□□□□ 0.66
PFN1-203ENST00000574872 PARK7Q99497 189 aaKnown RBP19.15■□□□□ 0.66
PFN1-203ENST00000574872 NUP88Q99567 741 aaPredicted RBP19.15■□□□□ 0.66
PFN1-203ENST00000574872 UBAC1Q9BSL1 405 aa19.15■□□□□ 0.66
PFN1-203ENST00000574872 ZFYVE28Q9HCC9 887 aa19.15■□□□□ 0.66
PFN1-203ENST00000574872 ZCCHC17Q9NP64 241 aaKnown RBP19.15■□□□□ 0.66
PFN1-203ENST00000574872 MYH4Q9Y623 1939 aa19.15■□□□□ 0.66
PFN1-203ENST00000574872 F5H6K3 240 aa19.14■□□□□ 0.65
PFN1-203ENST00000574872 NDUFB10O96000 172 aa19.14■□□□□ 0.65
PFN1-203ENST00000574872 OSBPP22059 807 aa19.14■□□□□ 0.65
PFN1-203ENST00000574872 NT5C2P49902 561 aa19.14■□□□□ 0.65
PFN1-203ENST00000574872 IRX3P78415 501 aaPredicted RBP19.14■□□□□ 0.65
PFN1-203ENST00000574872 KLRC3Q07444 240 aa19.14■□□□□ 0.65
PFN1-203ENST00000574872 PABPC4Q13310 644 aaKnown RBP eCLIP19.14■□□□□ 0.652e-61■■■■□ 26.4
PFN1-203ENST00000574872 RCSD1Q6JBY9 416 aa19.14■□□□□ 0.65
PFN1-203ENST00000574872 LPAR1Q92633 364 aa19.14■□□□□ 0.65
PFN1-203ENST00000574872 MKL1Q969V6 931 aa19.14■□□□□ 0.65
PFN1-203ENST00000574872 TMEM47Q9BQJ4 181 aa19.14■□□□□ 0.65
PFN1-203ENST00000574872 TANGO6Q9C0B7 1094 aa19.14■□□□□ 0.65
PFN1-203ENST00000574872 ASCC2Q9H1I8 757 aaPredicted RBP19.14■□□□□ 0.65
PFN1-203ENST00000574872 ISY1Q9ULR0 285 aaKnown RBP19.14■□□□□ 0.65
PFN1-203ENST00000574872 SLC45A1Q9Y2W3 748 aa19.14■□□□□ 0.65
PFN1-203ENST00000574872 TNKSO95271 1327 aa19.14■□□□□ 0.65
PFN1-203ENST00000574872 USP17L15C9J2P7 530 aa19.13■□□□□ 0.65
PFN1-203ENST00000574872 USP17L13C9JLJ4 530 aa19.13■□□□□ 0.65
PFN1-203ENST00000574872 USP17L11C9JVI0 530 aa19.13■□□□□ 0.65
PFN1-203ENST00000574872 USP17L18D6R9N7 530 aa19.13■□□□□ 0.65
PFN1-203ENST00000574872 USP17L22D6RA61 530 aa19.13■□□□□ 0.65
PFN1-203ENST00000574872 USP17L17D6RBQ6 530 aa19.13■□□□□ 0.65
PFN1-203ENST00000574872 USP17L19D6RCP7 530 aa19.13■□□□□ 0.65
PFN1-203ENST00000574872 USP17L20D6RJB6 530 aa19.13■□□□□ 0.65
PFN1-203ENST00000574872 HSPA8P11142 646 aaKnown RBP19.13■□□□□ 0.65
PFN1-203ENST00000574872 TOP1P11387 765 aaKnown RBP19.13■□□□□ 0.65
PFN1-203ENST00000574872 NOVP48745 357 aa19.13■□□□□ 0.65
PFN1-203ENST00000574872 ANTXR2P58335 489 aa19.13■□□□□ 0.65
PFN1-203ENST00000574872 USP17L24Q0WX57 530 aa19.13■□□□□ 0.65
PFN1-203ENST00000574872 ADCK5Q3MIX3 580 aa19.13■□□□□ 0.65
PFN1-203ENST00000574872 FAM83BQ5T0W9 1011 aa19.13■□□□□ 0.65
PFN1-203ENST00000574872 SLFN13Q68D06 897 aa19.13■□□□□ 0.65
PFN1-203ENST00000574872 SAMD1Q6SPF0 538 aaPredicted RBP19.13■□□□□ 0.65
PFN1-203ENST00000574872 RASGRP2Q7LDG7 609 aa19.13■□□□□ 0.65
PFN1-203ENST00000574872 ENAHQ8N8S7 591 aaPredicted RBP19.13■□□□□ 0.65
PFN1-203ENST00000574872 SMCR8Q8TEV9 937 aaPredicted RBP19.13■□□□□ 0.65
PFN1-203ENST00000574872 PNMA3Q9UL41 463 aa19.13■□□□□ 0.65
PFN1-203ENST00000574872 SNX14Q9Y5W7 946 aa19.13■□□□□ 0.65
PFN1-203ENST00000574872 WDR46O15213 610 aaKnown RBP19.12■□□□□ 0.65
PFN1-203ENST00000574872 MCCP23508 829 aa19.12■□□□□ 0.65
PFN1-203ENST00000574872 HOXA7P31268 230 aaPredicted RBP19.12■□□□□ 0.65
PFN1-203ENST00000574872 GMCL1P1Q8NEA9 526 aa19.12■□□□□ 0.65
PFN1-203ENST00000574872 KCNB2Q92953 911 aa19.12■□□□□ 0.65
PFN1-203ENST00000574872 P2RX7Q99572 595 aaKnown RBP19.12■□□□□ 0.65
PFN1-203ENST00000574872 CPA4Q9UI42 421 aa19.12■□□□□ 0.65
PFN1-203ENST00000574872 IFIT3O14879 490 aaKnown RBP19.11■□□□□ 0.65
PFN1-203ENST00000574872 EPB41L2O43491 1005 aaKnown RBP19.11■□□□□ 0.65
PFN1-203ENST00000574872 PRC1O43663 620 aa19.11■□□□□ 0.65
PFN1-203ENST00000574872 CTCFP49711 727 aaPredicted RBP19.11■□□□□ 0.65
PFN1-203ENST00000574872 LBX1P52954 281 aa19.11■□□□□ 0.65
PFN1-203ENST00000574872 KRT32Q14532 448 aa19.11■□□□□ 0.65
PFN1-203ENST00000574872 CCDC178Q5BJE1 867 aa19.11■□□□□ 0.65
PFN1-203ENST00000574872 CATSPERGQ6ZRH7 1159 aa19.11■□□□□ 0.65
PFN1-203ENST00000574872 DGKHQ86XP1 1220 aa19.11■□□□□ 0.65
PFN1-203ENST00000574872 JAKMIP1Q96N16 626 aaKnown RBP19.11■□□□□ 0.65
PFN1-203ENST00000574872 TTC14Q96N46 770 aa19.11■□□□□ 0.65
PFN1-203ENST00000574872 NEK1Q96PY6 1258 aa19.11■□□□□ 0.65
PFN1-203ENST00000574872 CFHR5Q9BXR6 569 aa19.11■□□□□ 0.65
PFN1-203ENST00000574872 LRRC2Q9BYS8 371 aa19.11■□□□□ 0.65
PFN1-203ENST00000574872 SYNPO2Q9UMS6 1093 aa19.11■□□□□ 0.65
PFN1-203ENST00000574872 ADGRA2Q96PE1 1338 aa19.1■□□□□ 0.65
PFN1-203ENST00000574872 TLR2O60603 784 aa19.1■□□□□ 0.65
PFN1-203ENST00000574872 FLOT1O75955 427 aa19.1■□□□□ 0.65
PFN1-203ENST00000574872 MCM5P33992 734 aa19.1■□□□□ 0.65
PFN1-203ENST00000574872 TSGA10IPQ3SY00 556 aa19.1■□□□□ 0.65
PFN1-203ENST00000574872 IFIT1BQ5T764 474 aaKnown RBP19.1■□□□□ 0.65
PFN1-203ENST00000574872 TCEANC2Q96MN5 208 aa19.1■□□□□ 0.65
PFN1-203ENST00000574872 KAT14Q9H8E8 782 aa19.1■□□□□ 0.65
PFN1-203ENST00000574872 SENP2Q9HC62 589 aa19.1■□□□□ 0.65
PFN1-203ENST00000574872 GPHNQ9NQX3 736 aaPredicted RBP19.1■□□□□ 0.65
PFN1-203ENST00000574872 FBXO28Q9NVF7 368 aa19.1■□□□□ 0.65
PFN1-203ENST00000574872 ERICH2A1L162 156 aa19.09■□□□□ 0.65
PFN1-203ENST00000574872 GPR25O00155 361 aa19.09■□□□□ 0.65
PFN1-203ENST00000574872 PEX10O60683 326 aa19.09■□□□□ 0.65
PFN1-203ENST00000574872 ECM2O94769 699 aaPredicted RBP19.09■□□□□ 0.65
PFN1-203ENST00000574872 CPA1P15085 419 aa19.09■□□□□ 0.65
PFN1-203ENST00000574872 SLC1A4P43007 532 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms