RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 TUBB2AQ13885 445 aa10.8□□□□□ -0.68
CCDC40-212ENST00000574799 NAA25Q14CX7 972 aa10.8□□□□□ -0.68
CCDC40-212ENST00000574799 WHAMMP3Q1A5X7 153 aa10.8□□□□□ -0.68
CCDC40-212ENST00000574799 BRAPQ7Z569 592 aa10.8□□□□□ -0.68
CCDC40-212ENST00000574799 N4BP2L2Q92802 583 aaPredicted RBP10.8□□□□□ -0.68
CCDC40-212ENST00000574799 CLIC6Q96NY7 704 aa10.8□□□□□ -0.68
CCDC40-212ENST00000574799 TUBB2BQ9BVA1 445 aa10.8□□□□□ -0.68
CCDC40-212ENST00000574799 SLC24A3Q9HC58 644 aa10.8□□□□□ -0.68
CCDC40-212ENST00000574799 DENND2AQ9ULE3 1009 aa10.8□□□□□ -0.68
CCDC40-212ENST00000574799 MYO6Q9UM54 1294 aa10.8□□□□□ -0.68
CCDC40-212ENST00000574799 DLEC1Q9Y238 1755 aa10.8□□□□□ -0.68
CCDC40-212ENST00000574799 LOC102724428A0A0B4J2F2 783 aa10.8□□□□□ -0.68
CCDC40-212ENST00000574799 TCRBV5S4A2TA0A5A2 114 aa10.8□□□□□ -0.68
CCDC40-212ENST00000574799 LRRIQ3A6PVS8 624 aaPredicted RBP10.8□□□□□ -0.68
CCDC40-212ENST00000574799 N4BP3O15049 544 aa10.8□□□□□ -0.68
CCDC40-212ENST00000574799 ADD1P35611 737 aaKnown RBP10.8□□□□□ -0.68
CCDC40-212ENST00000574799 SIK1P57059 783 aa10.8□□□□□ -0.68
CCDC40-212ENST00000574799 EXOSC10Q01780 885 aaKnown RBP10.8□□□□□ -0.68
CCDC40-212ENST00000574799 DDB1Q16531 1140 aa10.8□□□□□ -0.68
CCDC40-212ENST00000574799 B4GALNT4Q76KP1 1039 aa10.8□□□□□ -0.68
CCDC40-212ENST00000574799 SND1Q7KZF4 910 aaKnown RBP eCLIP10.8□□□□□ -0.68
CCDC40-212ENST00000574799 DZIP3Q86Y13 1208 aaKnown RBP10.8□□□□□ -0.68
CCDC40-212ENST00000574799 ANKRD18AQ8IVF6 992 aa10.8□□□□□ -0.68
CCDC40-212ENST00000574799 ACRBPQ8NEB7 543 aa10.8□□□□□ -0.68
CCDC40-212ENST00000574799 HNRNPLLQ8WVV9 542 aaKnown RBP10.8□□□□□ -0.68
CCDC40-212ENST00000574799 VEZTQ9HBM0 779 aa10.8□□□□□ -0.68
CCDC40-212ENST00000574799 CDK5RAP2Q96SN8 1893 aa10.8□□□□□ -0.68
CCDC40-212ENST00000574799 ABCC12Q96J65 1359 aa10.8□□□□□ -0.68
CCDC40-212ENST00000574799 CTDNEP1O95476 244 aa10.79□□□□□ -0.68
CCDC40-212ENST00000574799 HSPD1P10809 573 aaKnown RBP10.79□□□□□ -0.68
CCDC40-212ENST00000574799 PSEN1P49768 467 aa10.79□□□□□ -0.68
CCDC40-212ENST00000574799 ATP1A2P50993 1020 aa10.79□□□□□ -0.68
CCDC40-212ENST00000574799 CLNS1AP54105 237 aaKnown RBP10.79□□□□□ -0.68
CCDC40-212ENST00000574799 GSPT2Q8IYD1 628 aaKnown RBP10.79□□□□□ -0.68
CCDC40-212ENST00000574799 PUS7LQ9H0K6 701 aaKnown RBP10.79□□□□□ -0.68
CCDC40-212ENST00000574799 KCNH3Q9ULD8 1083 aa10.79□□□□□ -0.68
CCDC40-212ENST00000574799 FANCGO15287 622 aa10.79□□□□□ -0.68
CCDC40-212ENST00000574799 GGCXP38435 758 aa10.79□□□□□ -0.68
CCDC40-212ENST00000574799 CCT6AP40227 531 aaKnown RBP10.79□□□□□ -0.68
CCDC40-212ENST00000574799 NEDD9Q14511 834 aa10.79□□□□□ -0.68
CCDC40-212ENST00000574799 NOA1Q8NC60 698 aaKnown RBP10.79□□□□□ -0.68
CCDC40-212ENST00000574799 CCDC114Q96M63 670 aa10.79□□□□□ -0.68
CCDC40-212ENST00000574799 TTF2Q9UNY4 1162 aaKnown RBP10.79□□□□□ -0.68
CCDC40-212ENST00000574799 ZNF330Q9Y3S2 320 aaPredicted RBP10.79□□□□□ -0.68
CCDC40-212ENST00000574799 CCDC181Q5TID7 509 aa10.79□□□□□ -0.68
CCDC40-212ENST00000574799 ALG1Q9BT22 464 aa10.79□□□□□ -0.68
CCDC40-212ENST00000574799 FBXO3Q9UK99 471 aa10.79□□□□□ -0.68
CCDC40-212ENST00000574799 ODF2LQ9ULJ1 636 aa10.79□□□□□ -0.68
CCDC40-212ENST00000574799 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.79□□□□□ -0.68
CCDC40-212ENST00000574799 LTBP1Q14766 1721 aa10.79□□□□□ -0.68
CCDC40-212ENST00000574799 CARMIL3Q8ND23 1372 aa10.79□□□□□ -0.68
CCDC40-212ENST00000574799 GOLGA6L7A0A1B0GV03 622 aa10.78□□□□□ -0.68
CCDC40-212ENST00000574799 IRS4O14654 1257 aaPredicted RBP10.78□□□□□ -0.68
CCDC40-212ENST00000574799 EZRP15311 586 aaKnown RBP10.78□□□□□ -0.68
CCDC40-212ENST00000574799 ZAP70P43403 619 aa10.78□□□□□ -0.68
CCDC40-212ENST00000574799 AFMP43652 599 aa10.78□□□□□ -0.68
CCDC40-212ENST00000574799 KIF6Q6ZMV9 814 aa10.78□□□□□ -0.68
CCDC40-212ENST00000574799 KAT14Q9H8E8 782 aa10.78□□□□□ -0.68
CCDC40-212ENST00000574799 SEC31BQ9NQW1 1179 aa10.78□□□□□ -0.68
CCDC40-212ENST00000574799 SAMSN1Q9NSI8 373 aaKnown RBP10.78□□□□□ -0.68
CCDC40-212ENST00000574799 SALL1Q9NSC2 1324 aa10.78□□□□□ -0.68
CCDC40-212ENST00000574799 PDIA3P30101 505 aaKnown RBP10.78□□□□□ -0.68
CCDC40-212ENST00000574799 NAP1L1P55209 391 aaKnown RBP10.78□□□□□ -0.68
CCDC40-212ENST00000574799 CEP85LQ5SZL2 805 aa10.78□□□□□ -0.68
CCDC40-212ENST00000574799 IQCEQ6IPM2 695 aa10.78□□□□□ -0.68
CCDC40-212ENST00000574799 FNBP4Q8N3X1 1017 aaPredicted RBP10.78□□□□□ -0.68
CCDC40-212ENST00000574799 TC2NQ8N9U0 490 aa10.78□□□□□ -0.68
CCDC40-212ENST00000574799 SMARCC2Q8TAQ2 1214 aa10.78□□□□□ -0.68
CCDC40-212ENST00000574799 OPA1O60313 960 aa10.78□□□□□ -0.68
CCDC40-212ENST00000574799 HSF2BPO75031 334 aa10.78□□□□□ -0.68
CCDC40-212ENST00000574799 RXRAP19793 462 aa10.78□□□□□ -0.68
CCDC40-212ENST00000574799 SARNPP82979 210 aaKnown RBP10.78□□□□□ -0.68
CCDC40-212ENST00000574799 RBL2Q08999 1139 aa10.78□□□□□ -0.68
CCDC40-212ENST00000574799 CNGA4Q8IV77 575 aa10.78□□□□□ -0.68
CCDC40-212ENST00000574799 KIFC2Q96AC6 838 aa10.78□□□□□ -0.68
CCDC40-212ENST00000574799 ZNF512BQ96KM6 892 aaPredicted RBP10.78□□□□□ -0.68
CCDC40-212ENST00000574799 POLR3EQ9NVU0 708 aa10.78□□□□□ -0.68
CCDC40-212ENST00000574799 ADGRG1Q9Y653 693 aa10.78□□□□□ -0.68
CCDC40-212ENST00000574799 MMP14P50281 582 aa10.77□□□□□ -0.68
CCDC40-212ENST00000574799 TTC39AQ5SRH9 613 aa10.77□□□□□ -0.68
CCDC40-212ENST00000574799 BAZ2AQ9UIF9 1905 aaKnown RBP10.77□□□□□ -0.69
CCDC40-212ENST00000574799 MYO1FO00160 1098 aa10.77□□□□□ -0.69
CCDC40-212ENST00000574799 RPS6KA5O75582 802 aa10.77□□□□□ -0.69
CCDC40-212ENST00000574799 FKBP4Q02790 459 aaKnown RBP eCLIP10.77□□□□□ -0.69
CCDC40-212ENST00000574799 CKAP4Q07065 602 aaKnown RBP10.77□□□□□ -0.69
CCDC40-212ENST00000574799 ACTN3Q08043 901 aaPredicted RBP10.77□□□□□ -0.69
CCDC40-212ENST00000574799 PPFIA1Q13136 1202 aa10.77□□□□□ -0.69
CCDC40-212ENST00000574799 SWT1Q5T5J6 900 aaKnown RBP10.77□□□□□ -0.69
CCDC40-212ENST00000574799 CCDC82Q8N4S0 544 aa10.77□□□□□ -0.69
CCDC40-212ENST00000574799 RASSF8Q8NHQ8 419 aa10.77□□□□□ -0.69
CCDC40-212ENST00000574799 PIH1D3Q9NQM4 214 aaKnown RBP10.77□□□□□ -0.69
CCDC40-212ENST00000574799 HELLSQ9NRZ9 838 aa10.77□□□□□ -0.69
CCDC40-212ENST00000574799 CCDC87Q9NVE4 849 aa10.77□□□□□ -0.69
CCDC40-212ENST00000574799 LAMB1P07942 1786 aa10.77□□□□□ -0.69
CCDC40-212ENST00000574799 A0A1B0GUA9 196 aa10.77□□□□□ -0.69
CCDC40-212ENST00000574799 NUTM2BA6NNL0 878 aaPredicted RBP10.77□□□□□ -0.69
CCDC40-212ENST00000574799 NUTM2EB1AL46 878 aaPredicted RBP10.77□□□□□ -0.69
CCDC40-212ENST00000574799 POLR2DO15514 142 aaKnown RBP10.77□□□□□ -0.69
CCDC40-212ENST00000574799 ARID4AP29374 1257 aaPredicted RBP10.77□□□□□ -0.69
CCDC40-212ENST00000574799 CASP14P31944 242 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms