RNA–Protein interactions for RNA: ENST00000574639.1

TFAP4-204, Transcript of transcription factor AP-4, human

TSL 5

Gene TFAP4, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TFAP4-204	ENST00000574639	LHX8	Q68G74	356 aa		13.57	□□□□□ -0.24
TFAP4-204	ENST00000574639	PLEKHH3	Q7Z736	793 aa		13.57	□□□□□ -0.24
TFAP4-204	ENST00000574639	CLEC10A	Q8IUN9	316 aa		13.57	□□□□□ -0.24
TFAP4-204	ENST00000574639	GCC1	Q96CN9	775 aa		13.57	□□□□□ -0.24
TFAP4-204	ENST00000574639	NUDT12	Q9BQG2	462 aa		13.57	□□□□□ -0.24
TFAP4-204	ENST00000574639	FLRT1	Q9NZU1	646 aa		13.57	□□□□□ -0.24
TFAP4-204	ENST00000574639	OGDHL	Q9ULD0	1010 aa		13.57	□□□□□ -0.24
TFAP4-204	ENST00000574639	TRIOBP	Q9H2D6	2365 aa		13.56	□□□□□ -0.24
TFAP4-204	ENST00000574639	FARP2	O94887	1054 aa	Predicted RBP	13.56	□□□□□ -0.24
TFAP4-204	ENST00000574639	PTPRE	P23469	700 aa		13.56	□□□□□ -0.24
TFAP4-204	ENST00000574639	COG2	Q14746	738 aa		13.56	□□□□□ -0.24
TFAP4-204	ENST00000574639	GIMAP6	Q6P9H5	292 aa		13.56	□□□□□ -0.24
TFAP4-204	ENST00000574639	ANKLE1	Q8NAG6	615 aa		13.56	□□□□□ -0.24
TFAP4-204	ENST00000574639	DIS3L	Q8TF46	1054 aa	Known RBP	13.56	□□□□□ -0.24
TFAP4-204	ENST00000574639	SOCS4	Q8WXH5	440 aa		13.56	□□□□□ -0.24
TFAP4-204	ENST00000574639	CCDC17	Q96LX7	622 aa		13.56	□□□□□ -0.24
TFAP4-204	ENST00000574639	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	13.56	□□□□□ -0.24
TFAP4-204	ENST00000574639	SLC4A4	Q9Y6R1	1079 aa		13.56	□□□□□ -0.24
TFAP4-204	ENST00000574639	ROBO3	Q96MS0	1386 aa		13.56	□□□□□ -0.24
TFAP4-204	ENST00000574639	FOXP2	O15409	715 aa		13.55	□□□□□ -0.24
TFAP4-204	ENST00000574639	RNF113A	O15541	343 aa	Known RBP	13.55	□□□□□ -0.24
TFAP4-204	ENST00000574639	DSG3	P32926	999 aa		13.55	□□□□□ -0.24
TFAP4-204	ENST00000574639	FXR1	P51114	621 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
TFAP4-204	ENST00000574639	RRP1	P56182	461 aa	Known RBP	13.55	□□□□□ -0.24
TFAP4-204	ENST00000574639	MAP2K5	Q13163	448 aa		13.55	□□□□□ -0.24
TFAP4-204	ENST00000574639	GRB14	Q14449	540 aa		13.55	□□□□□ -0.24
TFAP4-204	ENST00000574639	ZSCAN25	Q6NSZ9	544 aa		13.55	□□□□□ -0.24
TFAP4-204	ENST00000574639	NPLOC4	Q8TAT6	608 aa		13.55	□□□□□ -0.24
TFAP4-204	ENST00000574639	APPBP2	Q92624	585 aa		13.55	□□□□□ -0.24
TFAP4-204	ENST00000574639	PAWR	Q96IZ0	340 aa	Known RBP	13.55	□□□□□ -0.24
TFAP4-204	ENST00000574639	PAGR1	Q9BTK6	254 aa		13.55	□□□□□ -0.24
TFAP4-204	ENST00000574639	BCL11A	Q9H165	835 aa		13.55	□□□□□ -0.24
TFAP4-204	ENST00000574639	VCPKMT	Q9H867	229 aa		13.55	□□□□□ -0.24
TFAP4-204	ENST00000574639	HMX1	Q9NP08	348 aa	Predicted RBP	13.55	□□□□□ -0.24
TFAP4-204	ENST00000574639	HOXC10	Q9NYD6	342 aa		13.55	□□□□□ -0.24
TFAP4-204	ENST00000574639	TTC41P	Q6P2S7	1318 aa		13.55	□□□□□ -0.24
TFAP4-204	ENST00000574639	IGKV6D-41	A0A0C4DH26	115 aa		13.54	□□□□□ -0.24
TFAP4-204	ENST00000574639	SLC15A5	A6NIM6	579 aa		13.54	□□□□□ -0.24
TFAP4-204	ENST00000574639		M0R2C6	588 aa		13.54	□□□□□ -0.24
TFAP4-204	ENST00000574639	TFRC	P02786	760 aa	Known RBP	13.54	□□□□□ -0.24
TFAP4-204	ENST00000574639	COL6A1	P12109	1028 aa		13.54	□□□□□ -0.24
TFAP4-204	ENST00000574639	RASA1	P20936	1047 aa		13.54	□□□□□ -0.24
TFAP4-204	ENST00000574639	LPAR1	Q92633	364 aa		13.54	□□□□□ -0.24
TFAP4-204	ENST00000574639	FEZ1	Q99689	392 aa		13.54	□□□□□ -0.24
TFAP4-204	ENST00000574639	MOV10L1	Q9BXT6	1211 aa	Known RBP	13.54	□□□□□ -0.24
TFAP4-204	ENST00000574639	EEF2	P13639	858 aa	Known RBP	13.53	□□□□□ -0.24
TFAP4-204	ENST00000574639	PRKAR2A	P13861	404 aa	Known RBP	13.53	□□□□□ -0.24
TFAP4-204	ENST00000574639	CCND3	P30281	292 aa	Predicted RBP	13.53	□□□□□ -0.24
TFAP4-204	ENST00000574639	RGS2	P41220	211 aa		13.53	□□□□□ -0.24
TFAP4-204	ENST00000574639	TRMT44	Q8IYL2	757 aa	Known RBP	13.53	□□□□□ -0.24
TFAP4-204	ENST00000574639	TRPV1	Q8NER1	839 aa		13.53	□□□□□ -0.24
TFAP4-204	ENST00000574639	REPS2	Q8NFH8	660 aa		13.53	□□□□□ -0.24
TFAP4-204	ENST00000574639	SEC62	Q99442	399 aa	Known RBP	13.53	□□□□□ -0.24
TFAP4-204	ENST00000574639	APBA2	Q99767	749 aa		13.53	□□□□□ -0.24
TFAP4-204	ENST00000574639	KANSL2	Q9H9L4	492 aa		13.53	□□□□□ -0.24
TFAP4-204	ENST00000574639	LAMA3	Q16787	3333 aa		13.53	□□□□□ -0.24
TFAP4-204	ENST00000574639	MPHOSPH10	O00566	681 aa	Known RBP	13.52	□□□□□ -0.25
TFAP4-204	ENST00000574639	GPAA1	O43292	621 aa		13.52	□□□□□ -0.25
TFAP4-204	ENST00000574639	COBL	O75128	1261 aa		13.52	□□□□□ -0.25
TFAP4-204	ENST00000574639	CCNA1	P78396	465 aa		13.52	□□□□□ -0.25
TFAP4-204	ENST00000574639	ICA1	Q05084	483 aa		13.52	□□□□□ -0.25
TFAP4-204	ENST00000574639	ZMYM1	Q5SVZ6	1142 aa		13.52	□□□□□ -0.25
TFAP4-204	ENST00000574639	SHCBP1	Q8NEM2	672 aa		13.52	□□□□□ -0.25
TFAP4-204	ENST00000574639	DPF3	Q92784	378 aa		13.52	□□□□□ -0.25
TFAP4-204	ENST00000574639	CRBN	Q96SW2	442 aa		13.52	□□□□□ -0.25
TFAP4-204	ENST00000574639	HTATIP2	Q9BUP3	242 aa		13.52	□□□□□ -0.25
TFAP4-204	ENST00000574639	SPATC1L	Q9H0A9	340 aa		13.52	□□□□□ -0.25
TFAP4-204	ENST00000574639	RBM27	Q9P2N5	1060 aa	Known RBP	13.52	□□□□□ -0.25
TFAP4-204	ENST00000574639	ARPP21	Q9UBL0	812 aa	Predicted RBP	13.52	□□□□□ -0.25
TFAP4-204	ENST00000574639	STAP2	Q9UGK3	403 aa		13.52	□□□□□ -0.25
TFAP4-204	ENST00000574639	PFAS	O15067	1338 aa		13.52	□□□□□ -0.25
TFAP4-204	ENST00000574639	PATL2	C9JE40	543 aa	Known RBP	13.51	□□□□□ -0.25
TFAP4-204	ENST00000574639	WDR46	O15213	610 aa	Known RBP	13.51	□□□□□ -0.25
TFAP4-204	ENST00000574639	STRN	O43815	780 aa		13.51	□□□□□ -0.25
TFAP4-204	ENST00000574639	ZFY	P08048	801 aa	Predicted RBP	13.51	□□□□□ -0.25
TFAP4-204	ENST00000574639	HDAC1	Q13547	482 aa	Predicted RBP	13.51	□□□□□ -0.25
TFAP4-204	ENST00000574639	TMEM132B	Q14DG7	1078 aa		13.51	□□□□□ -0.25
TFAP4-204	ENST00000574639	IFNL3	Q8IZI9	196 aa		13.51	□□□□□ -0.25
TFAP4-204	ENST00000574639	SPICE1	Q8N0Z3	855 aa		13.51	□□□□□ -0.25
TFAP4-204	ENST00000574639	MKL1	Q969V6	931 aa		13.51	□□□□□ -0.25
TFAP4-204	ENST00000574639	ATG4C	Q96DT6	458 aa		13.51	□□□□□ -0.25
TFAP4-204	ENST00000574639	NYAP2	Q9P242	653 aa		13.51	□□□□□ -0.25
TFAP4-204	ENST00000574639	PCDH10	Q9P2E7	1040 aa		13.51	□□□□□ -0.25
TFAP4-204	ENST00000574639	TACC3	Q9Y6A5	838 aa		13.51	□□□□□ -0.25
TFAP4-204	ENST00000574639	GLRX3	O76003	335 aa	Known RBP	13.5	□□□□□ -0.25
TFAP4-204	ENST00000574639	ERCC3	P19447	782 aa		13.5	□□□□□ -0.25
TFAP4-204	ENST00000574639	NECAB2	Q7Z6G3	386 aa		13.5	□□□□□ -0.25
TFAP4-204	ENST00000574639	MB21D1	Q8N884	522 aa		13.5	□□□□□ -0.25
TFAP4-204	ENST00000574639	ARHGEF10L	Q9HCE6	1279 aa		13.5	□□□□□ -0.25
TFAP4-204	ENST00000574639	FBXO28	Q9NVF7	368 aa		13.5	□□□□□ -0.25
TFAP4-204	ENST00000574639	ZNF214	Q9UL59	606 aa	Predicted RBP	13.5	□□□□□ -0.25
TFAP4-204	ENST00000574639	MCM3AP	O60318	1980 aa		13.5	□□□□□ -0.25
TFAP4-204	ENST00000574639	CYBA	P13498	195 aa		13.49	□□□□□ -0.25
TFAP4-204	ENST00000574639	ZKSCAN1	P17029	563 aa	Predicted RBP	13.49	□□□□□ -0.25
TFAP4-204	ENST00000574639	MX1	P20591	662 aa		13.49	□□□□□ -0.25
TFAP4-204	ENST00000574639	OLFML2B	Q68BL8	750 aa		13.49	□□□□□ -0.25
TFAP4-204	ENST00000574639	CHRDL2	Q6WN34	429 aa		13.49	□□□□□ -0.25
TFAP4-204	ENST00000574639	ABRA	Q8N0Z2	381 aa		13.49	□□□□□ -0.25
TFAP4-204	ENST00000574639	TANGO6	Q9C0B7	1094 aa		13.49	□□□□□ -0.25
TFAP4-204	ENST00000574639	NBPF3	Q9H094	633 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms