RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 PIN1Q13526 163 aaPredicted RBP2.72□□□□□ -1.97
CHD3-217ENST00000574022 MLC1Q15049 377 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 ZRSR2Q15696 482 aaKnown RBP2.72□□□□□ -1.97
CHD3-217ENST00000574022 VPS72Q15906 364 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 KIF4BQ2VIQ3 1234 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 GFOD2Q3B7J2 385 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 CFAP100Q494V2 611 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 C4orf46Q504U0 113 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 ZC3H12AQ5D1E8 599 aaKnown RBP2.72□□□□□ -1.97
CHD3-217ENST00000574022 TRIM61Q5EBN2 209 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 FAM102BQ5T8I3 360 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 TDRD10Q5VZ19 366 aaKnown RBP2.72□□□□□ -1.97
CHD3-217ENST00000574022 PSAPL1Q6NUJ1 521 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 PKN3Q6P5Z2 889 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 UBE2R2Q712K3 238 aaPredicted RBP2.72□□□□□ -1.97
CHD3-217ENST00000574022 BRAPQ7Z569 592 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 PPFIBP1Q86W92 1011 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 SPATS2Q86XZ4 545 aaKnown RBP2.72□□□□□ -1.97
CHD3-217ENST00000574022 CCDC144CPQ8IYA2 1237 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 SLFN12Q8IYM2 578 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 TCEAL8Q8IYN2 117 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 IL22RA1Q8N6P7 574 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 SLC7A14Q8TBB6 771 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 JPH3Q8WXH2 748 aaPredicted RBP2.72□□□□□ -1.97
CHD3-217ENST00000574022 SMARCC1Q92922 1105 aaPredicted RBP2.72□□□□□ -1.97
CHD3-217ENST00000574022 TNFRSF25Q93038 417 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 WNT8BQ93098 351 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 OSBP2Q969R2 916 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 EVI5LQ96CN4 794 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 ZNF837Q96EG3 531 aaPredicted RBP2.72□□□□□ -1.97
CHD3-217ENST00000574022 IL17RAQ96F46 866 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 SLC39A13Q96H72 371 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 TMEM87BQ96K49 555 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 CCDC74BQ96LY2 380 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 MAGEB10Q96LZ2 347 aaPredicted RBP2.72□□□□□ -1.97
CHD3-217ENST00000574022 FGD4Q96M96 766 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 CAMKK2Q96RR4 588 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 LPIN3Q9BQK8 851 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 ZNF700Q9H0M5 742 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 GBP3Q9H0R5 595 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 IFT22Q9H7X7 185 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 SLC52A2Q9HAB3 445 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 OSGEPQ9NPF4 335 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 CHST12Q9NRB3 414 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 APEX2Q9UBZ4 518 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 TJP2Q9UDY2 1190 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 ZNF180Q9UJW8 692 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 NAGPAQ9UK23 515 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 HIF3AQ9Y2N7 669 aa2.72□□□□□ -1.97
CHD3-217ENST00000574022 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.71□□□□□ -1.98
CHD3-217ENST00000574022 SOBPA7XYQ1 873 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 ADARB2-AS1A8MUL3 147 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 C9IYK1 514 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 LINC01387J3KSC0 135 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 C2CD2LO14523 706 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 NEMP1O14524 444 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 GABRDO14764 452 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 FSCN2O14926 492 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 FANCGO15287 622 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 SH3BP5O60239 455 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 ZEB2O60315 1214 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 RFPL1O75677 317 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 UBOX5O94941 541 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 FBXO21O94952 628 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 CAPNS1P04632 268 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 APPP05067 770 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 C6orf222P0C671 652 aaPredicted RBP2.71□□□□□ -1.98
CHD3-217ENST00000574022 JMJD7P0C870 316 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 ZSCAN20P17040 1043 aaPredicted RBP2.71□□□□□ -1.98
CHD3-217ENST00000574022 ITGA6P23229 1130 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 PAX3P23760 479 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 IGFALSP35858 605 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 SCNN1BP51168 640 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 RING1Q06587 406 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 ZNF460Q14592 562 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 SEPT7Q16181 437 aaKnown RBP2.71□□□□□ -1.98
CHD3-217ENST00000574022 LONRF3Q496Y0 759 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 HSP90AB4PQ58FF6 505 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 HP1BP3Q5SSJ5 553 aaPredicted RBP2.71□□□□□ -1.98
CHD3-217ENST00000574022 SYDE2Q5VT97 1194 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 SLC6A19Q695T7 634 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 CDCA2Q69YH5 1023 aaPredicted RBP2.71□□□□□ -1.98
CHD3-217ENST00000574022 NXNQ6DKJ4 435 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 TXNDC11Q6PKC3 985 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 CDC37L1Q7L3B6 337 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 FGD2Q7Z6J4 655 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 ZNF227Q86WZ6 799 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 HID1Q8IV36 788 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 MAGEB6Q8N7X4 407 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 CNTD1Q8N815 330 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 BVESQ8NE79 360 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 GSTCDQ8NEC7 633 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 OR2W6PQ8NHA6 318 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 PI4K2BQ8TCG2 481 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 ZNF507Q8TCN5 953 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 PTPRN2Q92932 1015 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 SCLYQ96I15 445 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 WNK4Q96J92 1243 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 LGR4Q9BXB1 951 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 RTFDC1Q9BY42 306 aaPredicted RBP2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms